RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 DUOX2Q9NRD8 1548 aa11.83□□□□□ -0.52
AP001042.1-201ENST00000416842 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
AP001042.1-201ENST00000416842 SLIT1O75093 1534 aa11.82□□□□□ -0.52
AP001042.1-201ENST00000416842 ERBINQ96RT1 1412 aa11.82□□□□□ -0.52
AP001042.1-201ENST00000416842 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
AP001042.1-201ENST00000416842 LTKP29376 864 aa11.81□□□□□ -0.52
AP001042.1-201ENST00000416842 EIF2AK4Q9P2K8 1649 aaKnown RBP11.81□□□□□ -0.52
AP001042.1-201ENST00000416842 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
AP001042.1-201ENST00000416842 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
AP001042.1-201ENST00000416842 NUP155O75694 1391 aa11.79□□□□□ -0.52
AP001042.1-201ENST00000416842 PIK3C2BO00750 1634 aa11.78□□□□□ -0.52
AP001042.1-201ENST00000416842 TXNDC2Q86VQ3 553 aa11.78□□□□□ -0.52
AP001042.1-201ENST00000416842 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
AP001042.1-201ENST00000416842 TMEM94Q12767 1356 aa11.78□□□□□ -0.52
AP001042.1-201ENST00000416842 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
AP001042.1-201ENST00000416842 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
AP001042.1-201ENST00000416842 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
AP001042.1-201ENST00000416842 UNC13BO14795 1591 aa11.75□□□□□ -0.53
AP001042.1-201ENST00000416842 NWD1Q149M9 1564 aa11.75□□□□□ -0.53
AP001042.1-201ENST00000416842 COL16A1Q07092 1604 aaPredicted RBP11.75□□□□□ -0.53
AP001042.1-201ENST00000416842 KDM5AP29375 1690 aaKnown RBP11.75□□□□□ -0.53
AP001042.1-201ENST00000416842 TET3O43151 1660 aa11.73□□□□□ -0.53
AP001042.1-201ENST00000416842 LRP6O75581 1613 aa11.73□□□□□ -0.53
AP001042.1-201ENST00000416842 PPP1R15AO75807 674 aaPredicted RBP11.73□□□□□ -0.53
AP001042.1-201ENST00000416842 PRDM15P57071 1507 aaPredicted RBP11.73□□□□□ -0.53
AP001042.1-201ENST00000416842 RBM33Q96EV2 1170 aaKnown RBP11.73□□□□□ -0.53
AP001042.1-201ENST00000416842 JCADQ9P266 1359 aa11.73□□□□□ -0.53
AP001042.1-201ENST00000416842 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
AP001042.1-201ENST00000416842 TMEM2Q9UHN6 1383 aa11.72□□□□□ -0.53
AP001042.1-201ENST00000416842 KCNA6P17658 529 aa11.72□□□□□ -0.53
AP001042.1-201ENST00000416842 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
AP001042.1-201ENST00000416842 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.53
AP001042.1-201ENST00000416842 ARHGAP31Q2M1Z3 1444 aa11.71□□□□□ -0.53
AP001042.1-201ENST00000416842 PROSER2Q86WR7 435 aaPredicted RBP11.71□□□□□ -0.53
AP001042.1-201ENST00000416842 EFCAB6Q5THR3 1501 aa11.7□□□□□ -0.54
AP001042.1-201ENST00000416842 CHD2O14647 1828 aaKnown RBP11.7□□□□□ -0.54
AP001042.1-201ENST00000416842 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
AP001042.1-201ENST00000416842 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
AP001042.1-201ENST00000416842 IQGAP3Q86VI3 1631 aa11.69□□□□□ -0.54
AP001042.1-201ENST00000416842 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
AP001042.1-201ENST00000416842 MSH6P52701 1360 aa11.68□□□□□ -0.54
AP001042.1-201ENST00000416842 SLC26A8Q96RN1 970 aa11.68□□□□□ -0.54
AP001042.1-201ENST00000416842 SLAIN2Q9P270 581 aa11.68□□□□□ -0.54
AP001042.1-201ENST00000416842 LMTK2Q8IWU2 1503 aa11.68□□□□□ -0.54
AP001042.1-201ENST00000416842 MYO5BQ9ULV0 1848 aa11.67□□□□□ -0.54
AP001042.1-201ENST00000416842 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
AP001042.1-201ENST00000416842 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
AP001042.1-201ENST00000416842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.54
AP001042.1-201ENST00000416842 AHDC1Q5TGY3 1603 aaPredicted RBP11.66□□□□□ -0.54
AP001042.1-201ENST00000416842 ADGRB3O60242 1522 aa11.65□□□□□ -0.54
AP001042.1-201ENST00000416842 SPATA31A6Q5VVP1 1343 aa11.65□□□□□ -0.54
AP001042.1-201ENST00000416842 MEX3CQ5U5Q3 659 aaKnown RBP11.65□□□□□ -0.54
AP001042.1-201ENST00000416842 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
AP001042.1-201ENST00000416842 CDK12Q9NYV4 1490 aaPredicted RBP11.64□□□□□ -0.55
AP001042.1-201ENST00000416842 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.64□□□□□ -0.55
AP001042.1-201ENST00000416842 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
AP001042.1-201ENST00000416842 KANK1Q14678 1352 aa11.64□□□□□ -0.55
AP001042.1-201ENST00000416842 DIP2AQ14689 1571 aa11.63□□□□□ -0.55
AP001042.1-201ENST00000416842 IDI1Q13907 227 aa11.63□□□□□ -0.55
AP001042.1-201ENST00000416842 RXRBP28702 533 aa11.62□□□□□ -0.55
AP001042.1-201ENST00000416842 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
AP001042.1-201ENST00000416842 NOS1P29475 1434 aa11.6□□□□□ -0.55
AP001042.1-201ENST00000416842 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
AP001042.1-201ENST00000416842 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
AP001042.1-201ENST00000416842 BCANQ96GW7 911 aa11.58□□□□□ -0.56
AP001042.1-201ENST00000416842 RGS12O14924 1447 aa11.58□□□□□ -0.56
AP001042.1-201ENST00000416842 NCOA3Q9Y6Q9 1424 aa11.58□□□□□ -0.56
AP001042.1-201ENST00000416842 PLEKHG1Q9ULL1 1385 aa11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 E9PCH4 1651 aa11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 AFF2P51816 1311 aa11.57□□□□□ -0.56
AP001042.1-201ENST00000416842 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
AP001042.1-201ENST00000416842 TMEM131LA2VDJ0 1609 aa11.56□□□□□ -0.56
AP001042.1-201ENST00000416842 NHSL1Q5SYE7 1610 aa11.56□□□□□ -0.56
AP001042.1-201ENST00000416842 TRPM2O94759 1503 aa11.55□□□□□ -0.56
AP001042.1-201ENST00000416842 PPP4R3CPQ6ZMV5 832 aa11.55□□□□□ -0.56
AP001042.1-201ENST00000416842 RIMS2Q9UQ26 1411 aa11.54□□□□□ -0.56
AP001042.1-201ENST00000416842 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
AP001042.1-201ENST00000416842 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
AP001042.1-201ENST00000416842 BRINP3Q76B58 766 aa11.53□□□□□ -0.56
AP001042.1-201ENST00000416842 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
AP001042.1-201ENST00000416842 ADAMTS13Q76LX8 1427 aa11.52□□□□□ -0.56
AP001042.1-201ENST00000416842 ATF3P18847 181 aa11.52□□□□□ -0.57
AP001042.1-201ENST00000416842 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.57
AP001042.1-201ENST00000416842 SLC52A1Q9NWF4 448 aa11.52□□□□□ -0.57
AP001042.1-201ENST00000416842 TBX22Q9Y458 520 aa11.52□□□□□ -0.57
AP001042.1-201ENST00000416842 SETBP1Q9Y6X0 1596 aa11.52□□□□□ -0.57
AP001042.1-201ENST00000416842 RBM6P78332 1123 aaKnown RBP11.51□□□□□ -0.57
AP001042.1-201ENST00000416842 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
AP001042.1-201ENST00000416842 NUTM2DQ5VT03 806 aaPredicted RBP11.5□□□□□ -0.57
AP001042.1-201ENST00000416842 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
AP001042.1-201ENST00000416842 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
AP001042.1-201ENST00000416842 DCAF11Q8TEB1 546 aa11.49□□□□□ -0.57
AP001042.1-201ENST00000416842 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms