RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
PHRF1-203ENST00000416188 CEBPAP49715 358 aaPredicted RBP19.62■□□□□ 0.73
PHRF1-203ENST00000416188 ADGRL1O94910 1474 aa19.61■□□□□ 0.73
PHRF1-203ENST00000416188 PRAM1Q96QH2 718 aa19.61■□□□□ 0.73
PHRF1-203ENST00000416188 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
PHRF1-203ENST00000416188 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
PHRF1-203ENST00000416188 STRN4Q9NRL3 753 aa19.6■□□□□ 0.73
PHRF1-203ENST00000416188 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
PHRF1-203ENST00000416188 RWDD1Q9H446 243 aaPredicted RBP19.6■□□□□ 0.73
PHRF1-203ENST00000416188 MIA2Q96PC5 1412 aa19.6■□□□□ 0.73
PHRF1-203ENST00000416188 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
PHRF1-203ENST00000416188 RRP7AQ9Y3A4 280 aaKnown RBP19.59■□□□□ 0.73
PHRF1-203ENST00000416188 SMC4Q9NTJ3 1288 aa19.58■□□□□ 0.73
PHRF1-203ENST00000416188 CUL7Q14999 1698 aa19.58■□□□□ 0.72
PHRF1-203ENST00000416188 DIAPH1O60610 1272 aaKnown RBP19.58■□□□□ 0.72
PHRF1-203ENST00000416188 NGEFQ8N5V2 710 aa19.58■□□□□ 0.72
PHRF1-203ENST00000416188 FRAT2O75474 233 aaPredicted RBP19.57■□□□□ 0.72
PHRF1-203ENST00000416188 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
PHRF1-203ENST00000416188 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
PHRF1-203ENST00000416188 GOLGA6L6A8MZA4 724 aa19.56■□□□□ 0.72
PHRF1-203ENST00000416188 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
PHRF1-203ENST00000416188 DCAF8L1A6NGE4 600 aa19.56■□□□□ 0.72
PHRF1-203ENST00000416188 KIAA1211Q6ZU35 1233 aa19.56■□□□□ 0.72
PHRF1-203ENST00000416188 SLKQ9H2G2 1235 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-203ENST00000416188 DENND4BO75064 1496 aaPredicted RBP19.55■□□□□ 0.72
PHRF1-203ENST00000416188 GGNBP2Q9H3C7 697 aa19.55■□□□□ 0.72
PHRF1-203ENST00000416188 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
PHRF1-203ENST00000416188 NRDCO43847 1150 aa19.55■□□□□ 0.72
PHRF1-203ENST00000416188 TCERG1O14776 1098 aaKnown RBP19.54■□□□□ 0.72
PHRF1-203ENST00000416188 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
PHRF1-203ENST00000416188 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.71
PHRF1-203ENST00000416188 HFM1A2PYH4 1435 aa19.51■□□□□ 0.71
PHRF1-203ENST00000416188 L1TD1Q5T7N2 865 aaKnown RBP19.5■□□□□ 0.71
PHRF1-203ENST00000416188 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
PHRF1-203ENST00000416188 PRDM11Q9NQV5 511 aa19.48■□□□□ 0.71
PHRF1-203ENST00000416188 MFAP1P55081 439 aaKnown RBP19.48■□□□□ 0.71
PHRF1-203ENST00000416188 GZF1Q9H116 711 aaPredicted RBP19.48■□□□□ 0.71
PHRF1-203ENST00000416188 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
PHRF1-203ENST00000416188 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
PHRF1-203ENST00000416188 XPCQ01831 940 aaPredicted RBP19.47■□□□□ 0.71
PHRF1-203ENST00000416188 FBXO31Q5XUX0 539 aaPredicted RBP19.47■□□□□ 0.71
PHRF1-203ENST00000416188 FANCAO15360 1455 aa19.47■□□□□ 0.71
PHRF1-203ENST00000416188 MSNP26038 577 aaKnown RBP19.47■□□□□ 0.71
PHRF1-203ENST00000416188 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
PHRF1-203ENST00000416188 NEXNQ0ZGT2 675 aa19.46■□□□□ 0.71
PHRF1-203ENST00000416188 TOM1L2Q6ZVM7 507 aa19.46■□□□□ 0.71
PHRF1-203ENST00000416188 CDK19Q9BWU1 502 aa19.46■□□□□ 0.71
PHRF1-203ENST00000416188 DAPK1P53355 1430 aa19.46■□□□□ 0.71
PHRF1-203ENST00000416188 HMMRO75330 724 aa19.46■□□□□ 0.71
PHRF1-203ENST00000416188 DRC7Q8IY82 874 aa19.46■□□□□ 0.71
PHRF1-203ENST00000416188 ERBINQ96RT1 1412 aa19.46■□□□□ 0.71
PHRF1-203ENST00000416188 TEX14Q8IWB6 1497 aa19.45■□□□□ 0.7
PHRF1-203ENST00000416188 GNL2Q13823 731 aaKnown RBP19.45■□□□□ 0.7
PHRF1-203ENST00000416188 GBP4Q96PP9 640 aa19.45■□□□□ 0.7
PHRF1-203ENST00000416188 ASXL2Q76L83 1435 aa19.44■□□□□ 0.7
PHRF1-203ENST00000416188 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
PHRF1-203ENST00000416188 HMOX1P09601 288 aa19.44■□□□□ 0.7
PHRF1-203ENST00000416188 CHAF1AQ13111 956 aaPredicted RBP19.43■□□□□ 0.7
PHRF1-203ENST00000416188 GPATCH3Q96I76 525 aa19.43■□□□□ 0.7
PHRF1-203ENST00000416188 KIF14Q15058 1648 aa19.43■□□□□ 0.7
PHRF1-203ENST00000416188 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
PHRF1-203ENST00000416188 TRIM6-TRIM34B2RNG4 842 aa19.41■□□□□ 0.7
PHRF1-203ENST00000416188 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-203ENST00000416188 CABP1Q9NZU7 370 aa19.41■□□□□ 0.7
PHRF1-203ENST00000416188 RTEL1-TNFRSF6BF6WH68 1400 aa19.41■□□□□ 0.7
PHRF1-203ENST00000416188 RIPK4P57078 832 aa19.4■□□□□ 0.7
PHRF1-203ENST00000416188 KIAA1107Q9UPP5 1409 aa19.4■□□□□ 0.7
PHRF1-203ENST00000416188 SUPT6HQ7KZ85 1726 aaKnown RBP19.4■□□□□ 0.7
PHRF1-203ENST00000416188 ANKRD30BQ9BXX2 1392 aa19.4■□□□□ 0.7
PHRF1-203ENST00000416188 NBPF1Q3BBV0 1214 aa19.39■□□□□ 0.7
PHRF1-203ENST00000416188 TATP17735 454 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-203ENST00000416188 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
PHRF1-203ENST00000416188 RBM33Q96EV2 1170 aaKnown RBP19.38■□□□□ 0.69
PHRF1-203ENST00000416188 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-203ENST00000416188 PPP1R1BQ9UD71 204 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-203ENST00000416188 DDX58O95786 925 aaKnown RBP19.38■□□□□ 0.69
PHRF1-203ENST00000416188 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
PHRF1-203ENST00000416188 DDX54Q8TDD1 881 aaKnown RBP19.37■□□□□ 0.69
PHRF1-203ENST00000416188 SMG6Q86US8 1419 aaKnown RBP19.37■□□□□ 0.69
PHRF1-203ENST00000416188 PLEKHO1Q53GL0 409 aaPredicted RBP19.37■□□□□ 0.69
PHRF1-203ENST00000416188 BCL2L13Q9BXK5 485 aa19.36■□□□□ 0.69
PHRF1-203ENST00000416188 IPO9Q96P70 1041 aaKnown RBP19.36■□□□□ 0.69
PHRF1-203ENST00000416188 C9orf78Q9NZ63 289 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-203ENST00000416188 TSPYL4Q9UJ04 414 aa19.36■□□□□ 0.69
PHRF1-203ENST00000416188 PRKRIP1Q9H875 184 aaPredicted RBP19.35■□□□□ 0.69
PHRF1-203ENST00000416188 APAF1O14727 1248 aa19.35■□□□□ 0.69
PHRF1-203ENST00000416188 ADAMTS2O95450 1211 aa19.35■□□□□ 0.69
PHRF1-203ENST00000416188 ZC3H6P61129 1189 aaKnown RBP19.35■□□□□ 0.69
PHRF1-203ENST00000416188 AMOTL2Q9Y2J4 779 aa19.35■□□□□ 0.69
PHRF1-203ENST00000416188 NOL8Q76FK4 1167 aaKnown RBP19.34■□□□□ 0.69
PHRF1-203ENST00000416188 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
PHRF1-203ENST00000416188 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
PHRF1-203ENST00000416188 IDI1Q13907 227 aa19.34■□□□□ 0.69
PHRF1-203ENST00000416188 UBAP1LF5GYI3 381 aa19.33■□□□□ 0.69
PHRF1-203ENST00000416188 SLC12A5Q9H2X9 1139 aa19.33■□□□□ 0.69
PHRF1-203ENST00000416188 PLIN1O60240 522 aa19.33■□□□□ 0.69
PHRF1-203ENST00000416188 CLSTN1O94985 981 aa19.33■□□□□ 0.68
PHRF1-203ENST00000416188 FBXW7Q969H0 707 aa19.32■□□□□ 0.68
PHRF1-203ENST00000416188 PTMSP20962 102 aa19.31■□□□□ 0.68
PHRF1-203ENST00000416188 NGLY1Q96IV0 654 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms