RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 SCAF11Q99590 1463 aaKnown RBP23.64■■□□□ 1.38
SCARB1-203ENST00000415380 SPHKAPQ2M3C7 1700 aa23.64■■□□□ 1.38
SCARB1-203ENST00000415380 TRPM2O94759 1503 aa23.64■■□□□ 1.37
SCARB1-203ENST00000415380 CDCA8Q53HL2 280 aa23.63■■□□□ 1.37
SCARB1-203ENST00000415380 ASXL1Q8IXJ9 1541 aa23.62■■□□□ 1.37
SCARB1-203ENST00000415380 SCAPERQ9BY12 1400 aa23.62■■□□□ 1.37
SCARB1-203ENST00000415380 CEP152O94986 1710 aa23.61■■□□□ 1.37
SCARB1-203ENST00000415380 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
SCARB1-203ENST00000415380 PIK3C2GO75747 1445 aa23.6■■□□□ 1.37
SCARB1-203ENST00000415380 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
SCARB1-203ENST00000415380 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
SCARB1-203ENST00000415380 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
SCARB1-203ENST00000415380 PTPRTO14522 1441 aa23.59■■□□□ 1.37
SCARB1-203ENST00000415380 MYOM1P52179 1685 aa23.59■■□□□ 1.37
SCARB1-203ENST00000415380 NEFMP07197 916 aa23.59■■□□□ 1.37
SCARB1-203ENST00000415380 CENPQQ7L2Z9 268 aaPredicted RBP23.59■■□□□ 1.37
SCARB1-203ENST00000415380 SPAG9O60271 1321 aaKnown RBP23.57■■□□□ 1.36
SCARB1-203ENST00000415380 STAC3Q96MF2 364 aa23.57■■□□□ 1.36
SCARB1-203ENST00000415380 DDRGK1Q96HY6 314 aa23.57■■□□□ 1.36
SCARB1-203ENST00000415380 USP35Q9P2H5 1018 aa23.56■■□□□ 1.36
SCARB1-203ENST00000415380 SLFN5Q08AF3 891 aa23.56■■□□□ 1.36
SCARB1-203ENST00000415380 NPC1L1Q9UHC9 1359 aa23.55■■□□□ 1.36
SCARB1-203ENST00000415380 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.55■■□□□ 1.36
SCARB1-203ENST00000415380 RTEL1-TNFRSF6BF6WH68 1400 aa23.54■■□□□ 1.36
SCARB1-203ENST00000415380 PPM1GO15355 546 aaPredicted RBP23.54■■□□□ 1.36
SCARB1-203ENST00000415380 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
SCARB1-203ENST00000415380 AFAP1Q8N556 730 aa23.54■■□□□ 1.36
SCARB1-203ENST00000415380 CCDC146Q8IYE0 955 aa23.53■■□□□ 1.36
SCARB1-203ENST00000415380 EIF3AQ14152 1382 aaKnown RBP23.53■■□□□ 1.36
SCARB1-203ENST00000415380 DEPDC5O75140 1603 aa23.52■■□□□ 1.36
SCARB1-203ENST00000415380 TRMT2AQ8IZ69 625 aaKnown RBP23.52■■□□□ 1.36
SCARB1-203ENST00000415380 KDM5AP29375 1690 aaKnown RBP23.51■■□□□ 1.35
SCARB1-203ENST00000415380 TET3O43151 1660 aa23.5■■□□□ 1.35
SCARB1-203ENST00000415380 UHRF1BP1LA0JNW5 1464 aa23.49■■□□□ 1.35
SCARB1-203ENST00000415380 SPINK5Q9NQ38 1064 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-203ENST00000415380 KIAA1210Q9ULL0 1709 aa23.49■■□□□ 1.35
SCARB1-203ENST00000415380 APAF1O14727 1248 aa23.48■■□□□ 1.35
SCARB1-203ENST00000415380 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
SCARB1-203ENST00000415380 C8orf34Q49A92 452 aa23.46■■□□□ 1.35
SCARB1-203ENST00000415380 NKTRP30414 1462 aaKnown RBP23.46■■□□□ 1.35
SCARB1-203ENST00000415380 KANK1Q14678 1352 aa23.45■■□□□ 1.34
SCARB1-203ENST00000415380 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
SCARB1-203ENST00000415380 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
SCARB1-203ENST00000415380 ERVK-7P63135 1459 aa23.44■■□□□ 1.34
SCARB1-203ENST00000415380 CFAP70Q5T0N1 1121 aa23.44■■□□□ 1.34
SCARB1-203ENST00000415380 BCAR3O75815 825 aa23.42■■□□□ 1.34
SCARB1-203ENST00000415380 SLC4A3P48751 1232 aa23.42■■□□□ 1.34
SCARB1-203ENST00000415380 NEURL4Q96JN8 1562 aa23.42■■□□□ 1.34
SCARB1-203ENST00000415380 MAP3K4Q9Y6R4 1608 aa23.41■■□□□ 1.34
SCARB1-203ENST00000415380 E9PSI1 815 aa23.41■■□□□ 1.34
SCARB1-203ENST00000415380 CARD14Q9BXL6 1004 aa23.41■■□□□ 1.34
SCARB1-203ENST00000415380 ABCA6Q8N139 1617 aa23.41■■□□□ 1.34
SCARB1-203ENST00000415380 ATP7AQ04656 1500 aa23.41■■□□□ 1.34
SCARB1-203ENST00000415380 RGS3P49796 1198 aa23.4■■□□□ 1.34
SCARB1-203ENST00000415380 MYOM2P54296 1465 aa23.4■■□□□ 1.34
SCARB1-203ENST00000415380 UGGT1Q9NYU2 1555 aa23.4■■□□□ 1.34
SCARB1-203ENST00000415380 INO80Q9ULG1 1556 aaPredicted RBP23.4■■□□□ 1.34
SCARB1-203ENST00000415380 KIF3BO15066 747 aa23.39■■□□□ 1.34
SCARB1-203ENST00000415380 DMRT2Q9Y5R5 561 aa23.39■■□□□ 1.34
SCARB1-203ENST00000415380 ADGRF5Q8IZF2 1346 aa23.39■■□□□ 1.34
SCARB1-203ENST00000415380 SLC24A1O60721 1099 aa23.39■■□□□ 1.33
SCARB1-203ENST00000415380 DAXXQ9UER7 740 aaPredicted RBP23.37■■□□□ 1.33
SCARB1-203ENST00000415380 NFKBIBQ15653 356 aa23.35■■□□□ 1.33
SCARB1-203ENST00000415380 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
SCARB1-203ENST00000415380 NGEFQ8N5V2 710 aa23.34■■□□□ 1.33
SCARB1-203ENST00000415380 FANCAO15360 1455 aa23.34■■□□□ 1.33
SCARB1-203ENST00000415380 ABCA9Q8IUA7 1624 aa23.33■■□□□ 1.32
SCARB1-203ENST00000415380 IGHDP01880 384 aa23.32■■□□□ 1.32
SCARB1-203ENST00000415380 IL27Q8NEV9 243 aa23.32■■□□□ 1.32
SCARB1-203ENST00000415380 IFT172Q9UG01 1749 aa23.32■■□□□ 1.32
SCARB1-203ENST00000415380 KIF1BO60333 1816 aa23.32■■□□□ 1.32
SCARB1-203ENST00000415380 POLR3AO14802 1390 aaPredicted RBP23.32■■□□□ 1.32
SCARB1-203ENST00000415380 MYO3AQ8NEV4 1616 aa23.31■■□□□ 1.32
SCARB1-203ENST00000415380 PDE3AQ14432 1141 aa23.3■■□□□ 1.32
SCARB1-203ENST00000415380 WWC1Q8IX03 1113 aa23.3■■□□□ 1.32
SCARB1-203ENST00000415380 MROH2AA6NES4 1674 aa23.3■■□□□ 1.32
SCARB1-203ENST00000415380 CGNL1Q0VF96 1302 aa23.29■■□□□ 1.32
SCARB1-203ENST00000415380 CENPJQ9HC77 1338 aaPredicted RBP23.29■■□□□ 1.32
SCARB1-203ENST00000415380 NRXN1Q9ULB1 1477 aa23.29■■□□□ 1.32
SCARB1-203ENST00000415380 EFCAB6Q5THR3 1501 aa23.29■■□□□ 1.32
SCARB1-203ENST00000415380 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
SCARB1-203ENST00000415380 ADGRL1O94910 1474 aa23.27■■□□□ 1.32
SCARB1-203ENST00000415380 GSE1Q14687 1217 aa23.27■■□□□ 1.32
SCARB1-203ENST00000415380 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
SCARB1-203ENST00000415380 PANK1Q8TE04 598 aa23.25■■□□□ 1.31
SCARB1-203ENST00000415380 CLUAP1Q96AJ1 413 aa23.25■■□□□ 1.31
SCARB1-203ENST00000415380 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
SCARB1-203ENST00000415380 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
SCARB1-203ENST00000415380 CANXP27824 592 aaKnown RBP23.24■■□□□ 1.31
SCARB1-203ENST00000415380 COG6Q9Y2V7 657 aa23.24■■□□□ 1.31
SCARB1-203ENST00000415380 PPRC1Q5VV67 1664 aaKnown RBP23.24■■□□□ 1.31
SCARB1-203ENST00000415380 NOS1P29475 1434 aa23.23■■□□□ 1.31
SCARB1-203ENST00000415380 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
SCARB1-203ENST00000415380 VIRMAQ69YN4 1812 aaKnown RBP23.23■■□□□ 1.31
SCARB1-203ENST00000415380 SETBP1Q9Y6X0 1596 aa23.21■■□□□ 1.31
SCARB1-203ENST00000415380 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
SCARB1-203ENST00000415380 USP19O94966 1318 aa23.21■■□□□ 1.31
SCARB1-203ENST00000415380 NEUROD2Q15784 382 aa23.2■■□□□ 1.3
SCARB1-203ENST00000415380 ADGRB3O60242 1522 aa23.2■■□□□ 1.3
SCARB1-203ENST00000415380 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms