RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 HSP90AA2PQ14568 343 aaPredicted RBP27.37■■□□□ 1.97
AP1S3-205ENST00000415298 ANP32AP39687 249 aaKnown RBP27.36■■□□□ 1.97
AP1S3-205ENST00000415298 CLTCQ00610 1675 aaKnown RBP27.35■■□□□ 1.97
AP1S3-205ENST00000415298 CAMSAP1Q5T5Y3 1602 aa27.35■■□□□ 1.97
AP1S3-205ENST00000415298 FBXO31Q5XUX0 539 aaPredicted RBP27.34■■□□□ 1.97
AP1S3-205ENST00000415298 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
AP1S3-205ENST00000415298 ESF1Q9H501 851 aaKnown RBP27.34■■□□□ 1.97
AP1S3-205ENST00000415298 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
AP1S3-205ENST00000415298 ZC3H13Q5T200 1668 aaKnown RBP27.3■■□□□ 1.96
AP1S3-205ENST00000415298 PLPPR3Q6T4P5 718 aa27.29■■□□□ 1.96
AP1S3-205ENST00000415298 RPRD2Q5VT52 1461 aaKnown RBP27.28■■□□□ 1.96
AP1S3-205ENST00000415298 PTPRTO14522 1441 aa27.28■■□□□ 1.96
AP1S3-205ENST00000415298 ZMYM3Q14202 1370 aa27.28■■□□□ 1.96
AP1S3-205ENST00000415298 CEBPAP49715 358 aaPredicted RBP27.28■■□□□ 1.96
AP1S3-205ENST00000415298 CCDC144AA2RUR9 1427 aa27.28■■□□□ 1.96
AP1S3-205ENST00000415298 UGGT1Q9NYU2 1555 aa27.27■■□□□ 1.96
AP1S3-205ENST00000415298 NCBP3Q53F19 620 aaKnown RBP27.27■■□□□ 1.96
AP1S3-205ENST00000415298 SPHKAPQ2M3C7 1700 aa27.26■■□□□ 1.96
AP1S3-205ENST00000415298 PPP4R2Q9NY27 417 aa27.26■■□□□ 1.95
AP1S3-205ENST00000415298 ARHGAP31Q2M1Z3 1444 aa27.25■■□□□ 1.95
AP1S3-205ENST00000415298 TONSLQ96HA7 1378 aa27.25■■□□□ 1.95
AP1S3-205ENST00000415298 L3MBTL2Q969R5 705 aa27.24■■□□□ 1.95
AP1S3-205ENST00000415298 RGL3Q3MIN7 710 aa27.24■■□□□ 1.95
AP1S3-205ENST00000415298 GSE1Q14687 1217 aa27.22■■□□□ 1.95
AP1S3-205ENST00000415298 TRPM2O94759 1503 aa27.22■■□□□ 1.95
AP1S3-205ENST00000415298 NOS1P29475 1434 aa27.2■■□□□ 1.95
AP1S3-205ENST00000415298 CLTCL1P53675 1640 aa27.19■■□□□ 1.94
AP1S3-205ENST00000415298 FER1L4A9Z1Z3 1794 aa27.19■■□□□ 1.94
AP1S3-205ENST00000415298 PREX1Q8TCU6 1659 aa27.17■■□□□ 1.94
AP1S3-205ENST00000415298 SYNMO15061 1565 aa27.17■■□□□ 1.94
AP1S3-205ENST00000415298 IDI1Q13907 227 aa27.17■■□□□ 1.94
AP1S3-205ENST00000415298 MADDQ8WXG6 1647 aa27.16■■□□□ 1.94
AP1S3-205ENST00000415298 ERVK-7P63135 1459 aa27.15■■□□□ 1.94
AP1S3-205ENST00000415298 CNTLNQ9NXG0 1405 aa27.15■■□□□ 1.94
AP1S3-205ENST00000415298 PPP1R15AO75807 674 aaPredicted RBP27.15■■□□□ 1.94
AP1S3-205ENST00000415298 CHGAP10645 457 aaKnown RBP27.15■■□□□ 1.94
AP1S3-205ENST00000415298 KDM2AQ9Y2K7 1162 aa27.13■■□□□ 1.93
AP1S3-205ENST00000415298 ARXQ96QS3 562 aa27.12■■□□□ 1.93
AP1S3-205ENST00000415298 ADAMTSL3P82987 1691 aa27.11■■□□□ 1.93
AP1S3-205ENST00000415298 PPM1GO15355 546 aaPredicted RBP27.11■■□□□ 1.93
AP1S3-205ENST00000415298 HSP90AA1P07900 732 aaKnown RBP27.11■■□□□ 1.93
AP1S3-205ENST00000415298 DCAF11Q8TEB1 546 aa27.11■■□□□ 1.93
AP1S3-205ENST00000415298 RIMS1Q86UR5 1692 aaKnown RBP27.1■■□□□ 1.93
AP1S3-205ENST00000415298 C3P01024 1663 aa27.09■■□□□ 1.93
AP1S3-205ENST00000415298 IRX6P78412 446 aaPredicted RBP27.09■■□□□ 1.93
AP1S3-205ENST00000415298 SPATA31E1Q6ZUB1 1445 aa27.09■■□□□ 1.93
AP1S3-205ENST00000415298 MROH2AA6NES4 1674 aa27.08■■□□□ 1.93
AP1S3-205ENST00000415298 SPATA31D1Q6ZQQ2 1576 aa27.07■■□□□ 1.92
AP1S3-205ENST00000415298 SLC52A1Q9NWF4 448 aa27.07■■□□□ 1.92
AP1S3-205ENST00000415298 ZNF326Q5BKZ1 582 aaKnown RBP27.06■■□□□ 1.92
AP1S3-205ENST00000415298 NBPF8Q3BBV2 869 aa27.05■■□□□ 1.92
AP1S3-205ENST00000415298 PIK3C2BO00750 1634 aa27.05■■□□□ 1.92
AP1S3-205ENST00000415298 PRDM4Q9UKN5 801 aa27.03■■□□□ 1.92
AP1S3-205ENST00000415298 KIF1BO60333 1816 aa27.03■■□□□ 1.92
AP1S3-205ENST00000415298 TNRQ92752 1358 aa27.02■■□□□ 1.92
AP1S3-205ENST00000415298 CCER2I3L3R5 266 aa27.02■■□□□ 1.92
AP1S3-205ENST00000415298 NUTM2DQ5VT03 806 aaPredicted RBP27■■□□□ 1.91
AP1S3-205ENST00000415298 LAS1LQ9Y4W2 734 aaKnown RBP27■■□□□ 1.91
AP1S3-205ENST00000415298 CALD1Q05682 793 aaKnown RBP26.99■■□□□ 1.91
AP1S3-205ENST00000415298 KDM4FA0A1W2PPD8 638 aa26.98■■□□□ 1.91
AP1S3-205ENST00000415298 STAG3Q9UJ98 1225 aa26.98■■□□□ 1.91
AP1S3-205ENST00000415298 MYO5BQ9ULV0 1848 aa26.97■■□□□ 1.91
AP1S3-205ENST00000415298 ADGRB3O60242 1522 aa26.96■■□□□ 1.91
AP1S3-205ENST00000415298 SENP3Q9H4L4 574 aaPredicted RBP26.95■■□□□ 1.91
AP1S3-205ENST00000415298 PTPRMP28827 1452 aa26.94■■□□□ 1.9
AP1S3-205ENST00000415298 FRAT1Q92837 279 aaPredicted RBP26.94■■□□□ 1.9
AP1S3-205ENST00000415298 TMEM131LA2VDJ0 1609 aa26.93■■□□□ 1.9
AP1S3-205ENST00000415298 NAP1L2Q9ULW6 460 aaPredicted RBP26.92■■□□□ 1.9
AP1S3-205ENST00000415298 B4GALNT3Q6L9W6 998 aa26.91■■□□□ 1.9
AP1S3-205ENST00000415298 ADGRF5Q8IZF2 1346 aa26.9■■□□□ 1.9
AP1S3-205ENST00000415298 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.9
AP1S3-205ENST00000415298 NAP1L5Q96NT1 182 aaPredicted RBP26.88■■□□□ 1.89
AP1S3-205ENST00000415298 A2ML1A8K2U0 1454 aa26.88■■□□□ 1.89
AP1S3-205ENST00000415298 NEURL4Q96JN8 1562 aa26.88■■□□□ 1.89
AP1S3-205ENST00000415298 PRAG1Q86YV5 1406 aa26.85■■□□□ 1.89
AP1S3-205ENST00000415298 BBXQ8WY36 941 aaPredicted RBP26.85■■□□□ 1.89
AP1S3-205ENST00000415298 UHRF1BP1Q6BDS2 1440 aa26.85■■□□□ 1.89
AP1S3-205ENST00000415298 RRAGDQ9NQL2 400 aaPredicted RBP26.84■■□□□ 1.89
AP1S3-205ENST00000415298 NBPF1Q3BBV0 1214 aa26.84■■□□□ 1.89
AP1S3-205ENST00000415298 PAXIP1Q6ZW49 1069 aaPredicted RBP26.84■■□□□ 1.89
AP1S3-205ENST00000415298 NLRP1Q9C000 1473 aa26.83■■□□□ 1.89
AP1S3-205ENST00000415298 HIRIP3Q9BW71 556 aaPredicted RBP26.83■■□□□ 1.89
AP1S3-205ENST00000415298 NEXMIFQ5QGS0 1516 aa26.82■■□□□ 1.88
AP1S3-205ENST00000415298 IFT172Q9UG01 1749 aa26.82■■□□□ 1.88
AP1S3-205ENST00000415298 RGS3P49796 1198 aa26.82■■□□□ 1.88
AP1S3-205ENST00000415298 PPLO60437 1756 aa26.82■■□□□ 1.88
AP1S3-205ENST00000415298 RPGRIP1LQ68CZ1 1315 aa26.82■■□□□ 1.88
AP1S3-205ENST00000415298 UBR1Q8IWV7 1749 aa26.81■■□□□ 1.88
AP1S3-205ENST00000415298 MYO3AQ8NEV4 1616 aa26.8■■□□□ 1.88
AP1S3-205ENST00000415298 SETD1BQ9UPS6 1966 aaKnown RBP26.79■■□□□ 1.88
AP1S3-205ENST00000415298 CFAP70Q5T0N1 1121 aa26.78■■□□□ 1.88
AP1S3-205ENST00000415298 VGFO15240 615 aaPredicted RBP26.78■■□□□ 1.88
AP1S3-205ENST00000415298 RIMS2Q9UQ26 1411 aa26.76■■□□□ 1.88
AP1S3-205ENST00000415298 MYOM2P54296 1465 aa26.76■■□□□ 1.87
AP1S3-205ENST00000415298 STAC3Q96MF2 364 aa26.75■■□□□ 1.87
AP1S3-205ENST00000415298 LTKP29376 864 aa26.75■■□□□ 1.87
AP1S3-205ENST00000415298 TMEM2Q9UHN6 1383 aa26.75■■□□□ 1.87
AP1S3-205ENST00000415298 GTF2E1P29083 439 aaPredicted RBP26.74■■□□□ 1.87
AP1S3-205ENST00000415298 PNNQ9H307 717 aaKnown RBP26.74■■□□□ 1.87
AP1S3-205ENST00000415298 PDCL3Q9H2J4 239 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms