RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 RGS12O14924 1447 aa21.39■■□□□ 1.02
RAPGEF1-204ENST00000414781 IDI1Q13907 227 aa21.39■■□□□ 1.01
RAPGEF1-204ENST00000414781 BCANQ96GW7 911 aa21.39■■□□□ 1.01
RAPGEF1-204ENST00000414781 ZRANB1Q9UGI0 708 aa21.39■■□□□ 1.01
RAPGEF1-204ENST00000414781 RBM6P78332 1123 aaKnown RBP21.38■■□□□ 1.01
RAPGEF1-204ENST00000414781 KANK1Q14678 1352 aa21.36■■□□□ 1.01
RAPGEF1-204ENST00000414781 NUTM2BA6NNL0 878 aaPredicted RBP21.36■■□□□ 1.01
RAPGEF1-204ENST00000414781 NUTM2EB1AL46 878 aaPredicted RBP21.36■■□□□ 1.01
RAPGEF1-204ENST00000414781 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
RAPGEF1-204ENST00000414781 NUTM2AQ8IVF1 878 aaPredicted RBP21.36■■□□□ 1.01
RAPGEF1-204ENST00000414781 ERBINQ96RT1 1412 aa21.36■■□□□ 1.01
RAPGEF1-204ENST00000414781 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
RAPGEF1-204ENST00000414781 ADGRB3O60242 1522 aa21.35■■□□□ 1.01
RAPGEF1-204ENST00000414781 ATF3P18847 181 aa21.35■■□□□ 1.01
RAPGEF1-204ENST00000414781 NUTM2DQ5VT03 806 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF1-204ENST00000414781 PLEKHG1Q9ULL1 1385 aa21.34■■□□□ 1.01
RAPGEF1-204ENST00000414781 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
RAPGEF1-204ENST00000414781 C19orf44Q9H6X5 657 aa21.33■■□□□ 1.01
RAPGEF1-204ENST00000414781 QTRT2Q9H974 415 aaKnown RBP21.32■■□□□ 1
RAPGEF1-204ENST00000414781 KIF15Q9NS87 1388 aa21.32■■□□□ 1
RAPGEF1-204ENST00000414781 NGLY1Q96IV0 654 aa21.31■■□□□ 1
RAPGEF1-204ENST00000414781 SLC52A1Q9NWF4 448 aa21.31■■□□□ 1
RAPGEF1-204ENST00000414781 LMTK2Q8IWU2 1503 aa21.3■■□□□ 1
RAPGEF1-204ENST00000414781 HDGFP51858 240 aaKnown RBP21.3■■□□□ 1
RAPGEF1-204ENST00000414781 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
RAPGEF1-204ENST00000414781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
RAPGEF1-204ENST00000414781 TBX22Q9Y458 520 aa21.29■■□□□ 1
RAPGEF1-204ENST00000414781 CHD2O14647 1828 aaKnown RBP21.29■■□□□ 1
RAPGEF1-204ENST00000414781 NOS1P29475 1434 aa21.29■■□□□ 1
RAPGEF1-204ENST00000414781 LOC105371045A0A1W2PR82 267 aa21.28■■□□□ 1
RAPGEF1-204ENST00000414781 BRINP3Q76B58 766 aa21.28■■□□□ 1
RAPGEF1-204ENST00000414781 MYOM3Q5VTT5 1437 aa21.28■■□□□ 1
RAPGEF1-204ENST00000414781 PPP1R15AO75807 674 aaPredicted RBP21.27■■□□□ 1
RAPGEF1-204ENST00000414781 ZFYVE9O95405 1425 aa21.27■■□□□ 1
RAPGEF1-204ENST00000414781 C8orf37Q96NL8 207 aa21.26■□□□□ 0.99
RAPGEF1-204ENST00000414781 PIK3R4Q99570 1358 aa21.24■□□□□ 0.99
RAPGEF1-204ENST00000414781 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.24■□□□□ 0.99
RAPGEF1-204ENST00000414781 DCCP43146 1447 aa21.24■□□□□ 0.99
RAPGEF1-204ENST00000414781 LRRC59Q96AG4 307 aaKnown RBP21.24■□□□□ 0.99
RAPGEF1-204ENST00000414781 SETBP1Q9Y6X0 1596 aa21.23■□□□□ 0.99
RAPGEF1-204ENST00000414781 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
RAPGEF1-204ENST00000414781 ASXL1Q8IXJ9 1541 aa21.22■□□□□ 0.99
RAPGEF1-204ENST00000414781 RIMS2Q9UQ26 1411 aa21.21■□□□□ 0.99
RAPGEF1-204ENST00000414781 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.19■□□□□ 0.98
RAPGEF1-204ENST00000414781 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
RAPGEF1-204ENST00000414781 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
RAPGEF1-204ENST00000414781 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
RAPGEF1-204ENST00000414781 ADAMTS13Q76LX8 1427 aa21.15■□□□□ 0.98
RAPGEF1-204ENST00000414781 TRPC5Q9UL62 973 aaPredicted RBP21.15■□□□□ 0.98
RAPGEF1-204ENST00000414781 NHSL1Q5SYE7 1610 aa21.15■□□□□ 0.98
RAPGEF1-204ENST00000414781 ABCC5O15440 1437 aa21.12■□□□□ 0.97
RAPGEF1-204ENST00000414781 MST1RQ04912 1400 aa21.12■□□□□ 0.97
RAPGEF1-204ENST00000414781 USP21Q9UK80 565 aa21.11■□□□□ 0.97
RAPGEF1-204ENST00000414781 TRPM2O94759 1503 aa21.1■□□□□ 0.97
RAPGEF1-204ENST00000414781 ADAMTS2O95450 1211 aa21.1■□□□□ 0.97
RAPGEF1-204ENST00000414781 CROCC2H7BZ55 1655 aa21.09■□□□□ 0.97
RAPGEF1-204ENST00000414781 AMOTL2Q9Y2J4 779 aa21.09■□□□□ 0.97
RAPGEF1-204ENST00000414781 TMEM131LA2VDJ0 1609 aa21.08■□□□□ 0.97
RAPGEF1-204ENST00000414781 ANKRD30AQ9BXX3 1397 aa21.08■□□□□ 0.96
RAPGEF1-204ENST00000414781 ATRNO75882 1429 aa21.06■□□□□ 0.96
RAPGEF1-204ENST00000414781 PTCH1Q13635 1447 aa21.06■□□□□ 0.96
RAPGEF1-204ENST00000414781 FNBP4Q8N3X1 1017 aaPredicted RBP21.06■□□□□ 0.96
RAPGEF1-204ENST00000414781 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
RAPGEF1-204ENST00000414781 DAPK1P53355 1430 aa21.04■□□□□ 0.96
RAPGEF1-204ENST00000414781 LRP5O75197 1615 aa21.04■□□□□ 0.96
RAPGEF1-204ENST00000414781 EP400Q96L91 3159 aa21.04■□□□□ 0.96
RAPGEF1-204ENST00000414781 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
RAPGEF1-204ENST00000414781 BLMP54132 1417 aaPredicted RBP21.02■□□□□ 0.96
RAPGEF1-204ENST00000414781 MYO5BQ9ULV0 1848 aa21.01■□□□□ 0.95
RAPGEF1-204ENST00000414781 CHGAP10645 457 aaKnown RBP21■□□□□ 0.95
RAPGEF1-204ENST00000414781 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
RAPGEF1-204ENST00000414781 ADGRL3Q9HAR2 1447 aa21■□□□□ 0.95
RAPGEF1-204ENST00000414781 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
RAPGEF1-204ENST00000414781 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
RAPGEF1-204ENST00000414781 SOS2Q07890 1332 aaPredicted RBP20.96■□□□□ 0.95
RAPGEF1-204ENST00000414781 PTPN23Q9H3S7 1636 aa20.96■□□□□ 0.95
RAPGEF1-204ENST00000414781 UNC13BO14795 1591 aa20.95■□□□□ 0.94
RAPGEF1-204ENST00000414781 LAMC1P11047 1609 aa20.95■□□□□ 0.94
RAPGEF1-204ENST00000414781 VPS8Q8N3P4 1428 aa20.95■□□□□ 0.94
RAPGEF1-204ENST00000414781 SF3B2Q13435 895 aaKnown RBP20.93■□□□□ 0.94
RAPGEF1-204ENST00000414781 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
RAPGEF1-204ENST00000414781 C1orf167Q5SNV9 1468 aa20.93■□□□□ 0.94
RAPGEF1-204ENST00000414781 GJD4Q96KN9 370 aaPredicted RBP20.92■□□□□ 0.94
RAPGEF1-204ENST00000414781 BCL9LQ86UU0 1499 aa20.92■□□□□ 0.94
RAPGEF1-204ENST00000414781 ADGRL2O95490 1459 aa20.9■□□□□ 0.94
RAPGEF1-204ENST00000414781 COL22A1Q8NFW1 1626 aaPredicted RBP20.89■□□□□ 0.94
RAPGEF1-204ENST00000414781 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.94
RAPGEF1-204ENST00000414781 MYOM2P54296 1465 aa20.88■□□□□ 0.93
RAPGEF1-204ENST00000414781 DEFB132Q7Z7B7 95 aa20.88■□□□□ 0.93
RAPGEF1-204ENST00000414781 NRXN3Q9Y4C0 1643 aa20.85■□□□□ 0.93
RAPGEF1-204ENST00000414781 METP08581 1390 aa20.85■□□□□ 0.93
RAPGEF1-204ENST00000414781 NALCNQ8IZF0 1738 aa20.84■□□□□ 0.93
RAPGEF1-204ENST00000414781 HRCP23327 699 aa20.83■□□□□ 0.93
RAPGEF1-204ENST00000414781 SPHKAPQ2M3C7 1700 aa20.82■□□□□ 0.92
RAPGEF1-204ENST00000414781 RALGAPBQ86X10 1494 aa20.81■□□□□ 0.92
RAPGEF1-204ENST00000414781 ORAI2Q96SN7 254 aa20.81■□□□□ 0.92
RAPGEF1-204ENST00000414781 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
RAPGEF1-204ENST00000414781 NPHP3Q7Z494 1330 aa20.79■□□□□ 0.92
RAPGEF1-204ENST00000414781 IQGAP3Q86VI3 1631 aa20.79■□□□□ 0.92
RAPGEF1-204ENST00000414781 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms