RNA–Protein interactions for RNA: ENST00000414034.7

GHDC-202, Transcript of GH3 domain containing, humanhuman

TSL 2 BASIC

Gene GHDC, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-202ENST00000414034 HSP90AA1P07900 732 aaKnown RBP22.27■■□□□ 1.16
GHDC-202ENST00000414034 PTPRGP23470 1445 aa22.27■■□□□ 1.16
GHDC-202ENST00000414034 KIAA0556O60303 1618 aa22.27■■□□□ 1.16
GHDC-202ENST00000414034 SHANK2Q9UPX8 1470 aa22.26■■□□□ 1.15
GHDC-202ENST00000414034 FSD2A1L4K1 749 aa22.26■■□□□ 1.15
GHDC-202ENST00000414034 TRMT2AQ8IZ69 625 aaKnown RBP22.26■■□□□ 1.15
GHDC-202ENST00000414034 UPF2Q9HAU5 1272 aaKnown RBP22.26■■□□□ 1.15
GHDC-202ENST00000414034 VSIG10Q8N0Z9 540 aa22.25■■□□□ 1.15
GHDC-202ENST00000414034 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
GHDC-202ENST00000414034 PPP2R1AP30153 589 aa22.24■■□□□ 1.15
GHDC-202ENST00000414034 LAMC1P11047 1609 aa22.24■■□□□ 1.15
GHDC-202ENST00000414034 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
GHDC-202ENST00000414034 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
GHDC-202ENST00000414034 PRDM15P57071 1507 aaPredicted RBP22.24■■□□□ 1.15
GHDC-202ENST00000414034 DISP1Q96F81 1524 aa22.24■■□□□ 1.15
GHDC-202ENST00000414034 NLRP1Q9C000 1473 aa22.24■■□□□ 1.15
GHDC-202ENST00000414034 ARXQ96QS3 562 aa22.23■■□□□ 1.15
GHDC-202ENST00000414034 ZMYND15Q9H091 742 aa22.22■■□□□ 1.15
GHDC-202ENST00000414034 CCDC144AA2RUR9 1427 aa22.22■■□□□ 1.15
GHDC-202ENST00000414034 ADCY10Q96PN6 1610 aa22.21■■□□□ 1.15
GHDC-202ENST00000414034 BCAR3O75815 825 aa22.21■■□□□ 1.15
GHDC-202ENST00000414034 KNSTRNQ9Y448 316 aa22.21■■□□□ 1.15
GHDC-202ENST00000414034 TSPY4P0CV99 314 aa22.2■■□□□ 1.14
GHDC-202ENST00000414034 TSPY10P0CW01 314 aa22.2■■□□□ 1.14
GHDC-202ENST00000414034 PDE3AQ14432 1141 aa22.2■■□□□ 1.14
GHDC-202ENST00000414034 RGL3Q3MIN7 710 aa22.19■■□□□ 1.14
GHDC-202ENST00000414034 CLUAP1Q96AJ1 413 aa22.19■■□□□ 1.14
GHDC-202ENST00000414034 MCM4P33991 863 aa22.19■■□□□ 1.14
GHDC-202ENST00000414034 TBC1D32Q96NH3 1257 aa22.19■■□□□ 1.14
GHDC-202ENST00000414034 TBC1D2Q9BYX2 928 aa22.19■■□□□ 1.14
GHDC-202ENST00000414034 NINLQ9Y2I6 1382 aa22.18■■□□□ 1.14
GHDC-202ENST00000414034 PANK2Q9BZ23 570 aa22.18■■□□□ 1.14
GHDC-202ENST00000414034 E9PSI1 815 aa22.17■■□□□ 1.14
GHDC-202ENST00000414034 MRE11P49959 708 aa22.16■■□□□ 1.14
GHDC-202ENST00000414034 CARMIL2Q6F5E8 1435 aa22.16■■□□□ 1.14
GHDC-202ENST00000414034 ZMYM3Q14202 1370 aa22.16■■□□□ 1.14
GHDC-202ENST00000414034 GZF1Q9H116 711 aaPredicted RBP22.15■■□□□ 1.14
GHDC-202ENST00000414034 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
GHDC-202ENST00000414034 CDC42BPAQ5VT25 1732 aa22.15■■□□□ 1.14
GHDC-202ENST00000414034 FAM135AQ9P2D6 1515 aa22.14■■□□□ 1.14
GHDC-202ENST00000414034 A2MP01023 1474 aa22.14■■□□□ 1.13
GHDC-202ENST00000414034 EIF2AK4Q9P2K8 1649 aaKnown RBP22.13■■□□□ 1.13
GHDC-202ENST00000414034 PIK3C2GO75747 1445 aa22.13■■□□□ 1.13
GHDC-202ENST00000414034 MAGI2Q86UL8 1455 aa22.13■■□□□ 1.13
GHDC-202ENST00000414034 ABCC10Q5T3U5 1492 aa22.12■■□□□ 1.13
GHDC-202ENST00000414034 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
GHDC-202ENST00000414034 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
GHDC-202ENST00000414034 CCDC146Q8IYE0 955 aa22.12■■□□□ 1.13
GHDC-202ENST00000414034 WDR7Q9Y4E6 1490 aa22.11■■□□□ 1.13
GHDC-202ENST00000414034 APAF1O14727 1248 aa22.11■■□□□ 1.13
GHDC-202ENST00000414034 TRAK2O60296 914 aa22.11■■□□□ 1.13
GHDC-202ENST00000414034 PMFBP1Q8TBY8 1022 aa22.11■■□□□ 1.13
GHDC-202ENST00000414034 MYH16Q9H6N6 1097 aa22.11■■□□□ 1.13
GHDC-202ENST00000414034 COG6Q9Y2V7 657 aa22.11■■□□□ 1.13
GHDC-202ENST00000414034 NGEFQ8N5V2 710 aa22.1■■□□□ 1.13
GHDC-202ENST00000414034 CHMP5Q9NZZ3 219 aa22.1■■□□□ 1.13
GHDC-202ENST00000414034 ISY1Q9ULR0 285 aaKnown RBP22.1■■□□□ 1.13
GHDC-202ENST00000414034 ABCC2Q92887 1545 aa22.09■■□□□ 1.13
GHDC-202ENST00000414034 AAMPQ13685 434 aa22.09■■□□□ 1.13
GHDC-202ENST00000414034 CENPJQ9HC77 1338 aaPredicted RBP22.09■■□□□ 1.13
GHDC-202ENST00000414034 ESPNB1AK53 854 aa22.08■■□□□ 1.13
GHDC-202ENST00000414034 PANK1Q8TE04 598 aa22.08■■□□□ 1.13
GHDC-202ENST00000414034 CCDC141Q6ZP82 1450 aa22.07■■□□□ 1.12
GHDC-202ENST00000414034 SPRYD3Q8NCJ5 442 aa22.06■■□□□ 1.12
GHDC-202ENST00000414034 GRPEL1Q9HAV7 217 aa22.06■■□□□ 1.12
GHDC-202ENST00000414034 NPM1P06748 294 aaKnown RBP eCLIP22.06■■□□□ 1.12
GHDC-202ENST00000414034 PLB1Q6P1J6 1458 aa22.06■■□□□ 1.12
GHDC-202ENST00000414034 ASXL1Q8IXJ9 1541 aa22.05■■□□□ 1.12
GHDC-202ENST00000414034 CDCA8Q53HL2 280 aa22.04■■□□□ 1.12
GHDC-202ENST00000414034 DDX11L8A8MPP1 907 aa22.04■■□□□ 1.12
GHDC-202ENST00000414034 PLA2R1Q13018 1463 aa22.04■■□□□ 1.12
GHDC-202ENST00000414034 PLXNC1O60486 1568 aa22.03■■□□□ 1.12
GHDC-202ENST00000414034 NPC1L1Q9UHC9 1359 aa22.02■■□□□ 1.12
GHDC-202ENST00000414034 PLEKHD1A6NEE1 506 aa22.02■■□□□ 1.12
GHDC-202ENST00000414034 TRIM44Q96DX7 344 aaPredicted RBP22.02■■□□□ 1.12
GHDC-202ENST00000414034 HNRNPMP52272 730 aaKnown RBP eCLIP22.01■■□□□ 1.11
GHDC-202ENST00000414034 PDZRN3Q9UPQ7 1066 aa22.01■■□□□ 1.11
GHDC-202ENST00000414034 SYNMO15061 1565 aa22.01■■□□□ 1.11
GHDC-202ENST00000414034 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
GHDC-202ENST00000414034 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
GHDC-202ENST00000414034 TPM2P07951 284 aa22■■□□□ 1.11
GHDC-202ENST00000414034 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
GHDC-202ENST00000414034 PCDHB15Q9Y5E8 787 aa21.99■■□□□ 1.11
GHDC-202ENST00000414034 C22orf23Q9BZE7 217 aa21.98■■□□□ 1.11
GHDC-202ENST00000414034 RWDD1Q9H446 243 aaPredicted RBP21.98■■□□□ 1.11
GHDC-202ENST00000414034 RNF17Q9BXT8 1623 aaKnown RBP21.98■■□□□ 1.11
GHDC-202ENST00000414034 ERBB4Q15303 1308 aa21.97■■□□□ 1.11
GHDC-202ENST00000414034 FAM69CQ0P6D2 419 aa21.97■■□□□ 1.11
GHDC-202ENST00000414034 KIF13AQ9H1H9 1805 aa21.95■■□□□ 1.1
GHDC-202ENST00000414034 WWC1Q8IX03 1113 aa21.95■■□□□ 1.1
GHDC-202ENST00000414034 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
GHDC-202ENST00000414034 PDCL3Q9H2J4 239 aa21.94■■□□□ 1.1
GHDC-202ENST00000414034 RARSP54136 660 aaKnown RBP21.93■■□□□ 1.1
GHDC-202ENST00000414034 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
GHDC-202ENST00000414034 RTEL1-TNFRSF6BF6WH68 1400 aa21.92■■□□□ 1.1
GHDC-202ENST00000414034 UNC13BO14795 1591 aa21.91■■□□□ 1.1
GHDC-202ENST00000414034 MFAP1P55081 439 aaKnown RBP21.91■■□□□ 1.1
GHDC-202ENST00000414034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.91■■□□□ 1.1
GHDC-202ENST00000414034 UHRF1BP1LA0JNW5 1464 aa21.91■■□□□ 1.1
GHDC-202ENST00000414034 ZNF692Q9BU19 519 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms