RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 C9orf84Q5VXU9 1444 aa6.71□□□□□ -1.34
TOP2B-202ENST00000413971 TMCO4Q5TGY1 634 aa6.71□□□□□ -1.34
TOP2B-202ENST00000413971 TRIM52Q96A61 297 aa6.71□□□□□ -1.34
TOP2B-202ENST00000413971 SHANK2Q9UPX8 1470 aa6.71□□□□□ -1.34
TOP2B-202ENST00000413971 RAPGEF2Q9Y4G8 1499 aa6.71□□□□□ -1.34
TOP2B-202ENST00000413971 PPP1R37O75864 691 aa6.7□□□□□ -1.34
TOP2B-202ENST00000413971 SPDYE1Q8NFV5 336 aaPredicted RBP6.7□□□□□ -1.34
TOP2B-202ENST00000413971 ZRANB1Q9UGI0 708 aa6.7□□□□□ -1.34
TOP2B-202ENST00000413971 CARMIL1Q5VZK9 1371 aa6.7□□□□□ -1.34
TOP2B-202ENST00000413971 HECW1Q76N89 1606 aa6.69□□□□□ -1.34
TOP2B-202ENST00000413971 RASEFQ8IZ41 740 aa6.69□□□□□ -1.34
TOP2B-202ENST00000413971 MFRPQ9BY79 579 aa6.69□□□□□ -1.34
TOP2B-202ENST00000413971 CLEC11AQ9Y240 323 aa6.69□□□□□ -1.34
TOP2B-202ENST00000413971 A6NJR5 290 aa6.69□□□□□ -1.34
TOP2B-202ENST00000413971 MFAP1P55081 439 aaKnown RBP6.69□□□□□ -1.34
TOP2B-202ENST00000413971 ESF1Q9H501 851 aaKnown RBP6.69□□□□□ -1.34
TOP2B-202ENST00000413971 ATP10BO94823 1461 aa6.68□□□□□ -1.34
TOP2B-202ENST00000413971 MLLT3P42568 568 aaPredicted RBP6.68□□□□□ -1.34
TOP2B-202ENST00000413971 ZNF777Q9ULD5 760 aaPredicted RBP6.68□□□□□ -1.34
TOP2B-202ENST00000413971 GZF1Q9H116 711 aaPredicted RBP6.67□□□□□ -1.34
TOP2B-202ENST00000413971 SETBP1Q9Y6X0 1596 aa6.67□□□□□ -1.34
TOP2B-202ENST00000413971 NPATQ14207 1427 aa6.66□□□□□ -1.34
TOP2B-202ENST00000413971 PIP4P2Q8N4L2 257 aa6.66□□□□□ -1.34
TOP2B-202ENST00000413971 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
TOP2B-202ENST00000413971 KIF27Q86VH2 1401 aa6.65□□□□□ -1.34
TOP2B-202ENST00000413971 LRRC7Q96NW7 1537 aa6.65□□□□□ -1.35
TOP2B-202ENST00000413971 FXR2P51116 673 aaKnown RBP eCLIP6.64□□□□□ -1.358e-7■■■□□ 15.8
TOP2B-202ENST00000413971 ZNF772Q68DY9 489 aaPredicted RBP6.64□□□□□ -1.35
TOP2B-202ENST00000413971 CFAP74Q9C0B2 1584 aa6.64□□□□□ -1.35
TOP2B-202ENST00000413971 RXRBP28702 533 aa6.64□□□□□ -1.35
TOP2B-202ENST00000413971 IRF5Q13568 498 aa6.64□□□□□ -1.35
TOP2B-202ENST00000413971 DDRGK1Q96HY6 314 aa6.64□□□□□ -1.35
TOP2B-202ENST00000413971 SCAPERQ9BY12 1400 aa6.63□□□□□ -1.35
TOP2B-202ENST00000413971 CNTLNQ9NXG0 1405 aa6.63□□□□□ -1.35
TOP2B-202ENST00000413971 EIF5BO60841 1220 aaKnown RBP6.63□□□□□ -1.35
TOP2B-202ENST00000413971 MYT1Q01538 1121 aa6.63□□□□□ -1.35
TOP2B-202ENST00000413971 MNX1P50219 401 aaPredicted RBP6.62□□□□□ -1.35
TOP2B-202ENST00000413971 LARP6Q9BRS8 491 aaKnown RBP6.62□□□□□ -1.35
TOP2B-202ENST00000413971 VWDEQ8N2E2 1590 aa6.62□□□□□ -1.35
TOP2B-202ENST00000413971 MCM6Q14566 821 aa6.62□□□□□ -1.35
TOP2B-202ENST00000413971 AGLP35573 1532 aa6.62□□□□□ -1.35
TOP2B-202ENST00000413971 RNF17Q9BXT8 1623 aaKnown RBP6.61□□□□□ -1.35
TOP2B-202ENST00000413971 ZNF142P52746 1687 aaPredicted RBP6.61□□□□□ -1.35
TOP2B-202ENST00000413971 FAM135BQ49AJ0 1406 aa6.61□□□□□ -1.35
TOP2B-202ENST00000413971 CDK12Q9NYV4 1490 aaPredicted RBP6.61□□□□□ -1.35
TOP2B-202ENST00000413971 YY1P25490 414 aa6.61□□□□□ -1.35
TOP2B-202ENST00000413971 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
TOP2B-202ENST00000413971 CEP170BQ9Y4F5 1589 aaPredicted RBP6.61□□□□□ -1.35
TOP2B-202ENST00000413971 ZMYM3Q14202 1370 aa6.61□□□□□ -1.35
TOP2B-202ENST00000413971 SUPT6HQ7KZ85 1726 aaKnown RBP6.61□□□□□ -1.35
TOP2B-202ENST00000413971 CDK11BP21127 795 aaKnown RBP6.6□□□□□ -1.35
TOP2B-202ENST00000413971 PROSER2Q86WR7 435 aaPredicted RBP6.6□□□□□ -1.35
TOP2B-202ENST00000413971 POM121Q96HA1 1249 aa6.6□□□□□ -1.35
TOP2B-202ENST00000413971 CDK11AQ9UQ88 783 aaPredicted RBP6.6□□□□□ -1.35
TOP2B-202ENST00000413971 PRR29P0C7W0 189 aa6.6□□□□□ -1.35
TOP2B-202ENST00000413971 PARP9Q8IXQ6 854 aa6.6□□□□□ -1.35
TOP2B-202ENST00000413971 GOLGA3Q08378 1498 aa6.6□□□□□ -1.35
TOP2B-202ENST00000413971 FAM9AQ8IZU1 332 aaPredicted RBP6.59□□□□□ -1.35
TOP2B-202ENST00000413971 SERPINA10Q9UK55 444 aa6.59□□□□□ -1.35
TOP2B-202ENST00000413971 ARIH1Q9Y4X5 557 aaPredicted RBP6.59□□□□□ -1.35
TOP2B-202ENST00000413971 MYO3AQ8NEV4 1616 aa6.59□□□□□ -1.35
TOP2B-202ENST00000413971 FBXW7Q969H0 707 aa6.59□□□□□ -1.36
TOP2B-202ENST00000413971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.59□□□□□ -1.36
TOP2B-202ENST00000413971 NEURL4Q96JN8 1562 aa6.59□□□□□ -1.36
TOP2B-202ENST00000413971 REREQ9P2R6 1566 aa6.58□□□□□ -1.36
TOP2B-202ENST00000413971 PRKAR2AP13861 404 aaKnown RBP6.58□□□□□ -1.36
TOP2B-202ENST00000413971 HSP90B1P14625 803 aaKnown RBP6.58□□□□□ -1.36
TOP2B-202ENST00000413971 GPR37O15354 613 aa6.57□□□□□ -1.36
TOP2B-202ENST00000413971 FNBP4Q8N3X1 1017 aaPredicted RBP6.57□□□□□ -1.36
TOP2B-202ENST00000413971 CREBZFQ9NS37 354 aa6.57□□□□□ -1.36
TOP2B-202ENST00000413971 SENP3-EIF4A1A0A087X0R7 540 aa6.57□□□□□ -1.36
TOP2B-202ENST00000413971 NUTM2BA6NNL0 878 aaPredicted RBP6.57□□□□□ -1.36
TOP2B-202ENST00000413971 NUTM2EB1AL46 878 aaPredicted RBP6.57□□□□□ -1.36
TOP2B-202ENST00000413971 E9PSI1 815 aa6.57□□□□□ -1.36
TOP2B-202ENST00000413971 NUTM2DQ5VT03 806 aaPredicted RBP6.57□□□□□ -1.36
TOP2B-202ENST00000413971 NUTM2AQ8IVF1 878 aaPredicted RBP6.57□□□□□ -1.36
TOP2B-202ENST00000413971 CCDC102AQ96A19 550 aa6.57□□□□□ -1.36
TOP2B-202ENST00000413971 MYT1LQ9UL68 1186 aa6.57□□□□□ -1.36
TOP2B-202ENST00000413971 JCADQ9P266 1359 aa6.56□□□□□ -1.36
TOP2B-202ENST00000413971 MFSD10Q14728 455 aa6.56□□□□□ -1.36
TOP2B-202ENST00000413971 MEX3CQ5U5Q3 659 aaKnown RBP6.56□□□□□ -1.36
TOP2B-202ENST00000413971 ANKLE2Q86XL3 938 aa6.56□□□□□ -1.36
TOP2B-202ENST00000413971 AFAP1Q8N556 730 aa6.56□□□□□ -1.36
TOP2B-202ENST00000413971 FBXO22Q8NEZ5 403 aa6.56□□□□□ -1.36
TOP2B-202ENST00000413971 MROH2AA6NES4 1674 aa6.56□□□□□ -1.36
TOP2B-202ENST00000413971 LRP5O75197 1615 aa6.56□□□□□ -1.36
TOP2B-202ENST00000413971 DIP2CQ9Y2E4 1556 aa6.55□□□□□ -1.36
TOP2B-202ENST00000413971 PLEKHD1A6NEE1 506 aa6.55□□□□□ -1.36
TOP2B-202ENST00000413971 PDAP1Q13442 181 aaKnown RBP6.55□□□□□ -1.36
TOP2B-202ENST00000413971 A2ML1A8K2U0 1454 aa6.55□□□□□ -1.36
TOP2B-202ENST00000413971 POLR1AO95602 1720 aaPredicted RBP6.55□□□□□ -1.36
TOP2B-202ENST00000413971 DNMT1P26358 1616 aaKnown RBP6.55□□□□□ -1.36
TOP2B-202ENST00000413971 HMGB1P09429 215 aaKnown RBP6.55□□□□□ -1.36
TOP2B-202ENST00000413971 CHADLQ6NUI6 762 aa6.55□□□□□ -1.36
TOP2B-202ENST00000413971 DDX27Q96GQ7 796 aaKnown RBP6.55□□□□□ -1.36
TOP2B-202ENST00000413971 GOPCQ9HD26 462 aa6.55□□□□□ -1.36
TOP2B-202ENST00000413971 PCDHB8Q9UN66 801 aa6.55□□□□□ -1.36
TOP2B-202ENST00000413971 PCDHB13Q9Y5F0 798 aa6.55□□□□□ -1.36
TOP2B-202ENST00000413971 SYNMO15061 1565 aa6.54□□□□□ -1.36
TOP2B-202ENST00000413971 STRCP1A6NGW2 1772 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms