RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SPHKAPQ2M3C7 1700 aa19.75■□□□□ 0.75
TTC39A-208ENST00000413473 NPM2Q86SE8 214 aaKnown RBP19.75■□□□□ 0.75
TTC39A-208ENST00000413473 KIF3BO15066 747 aa19.74■□□□□ 0.75
TTC39A-208ENST00000413473 CLASP1Q7Z460 1538 aa19.74■□□□□ 0.75
TTC39A-208ENST00000413473 CEP152O94986 1710 aa19.74■□□□□ 0.75
TTC39A-208ENST00000413473 PLEKHH1Q9ULM0 1364 aa19.74■□□□□ 0.75
TTC39A-208ENST00000413473 MS4A1P11836 297 aa19.73■□□□□ 0.75
TTC39A-208ENST00000413473 KANK1Q14678 1352 aa19.73■□□□□ 0.75
TTC39A-208ENST00000413473 C20orf194Q5TEA3 1177 aa19.73■□□□□ 0.75
TTC39A-208ENST00000413473 BACH2Q9BYV9 841 aa19.73■□□□□ 0.75
TTC39A-208ENST00000413473 DUSP27Q5VZP5 1158 aa19.71■□□□□ 0.75
TTC39A-208ENST00000413473 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
TTC39A-208ENST00000413473 SYNMO15061 1565 aa19.71■□□□□ 0.75
TTC39A-208ENST00000413473 ASXL1Q8IXJ9 1541 aa19.7■□□□□ 0.74
TTC39A-208ENST00000413473 DEPDC5O75140 1603 aa19.7■□□□□ 0.74
TTC39A-208ENST00000413473 CFAP70Q5T0N1 1121 aa19.7■□□□□ 0.74
TTC39A-208ENST00000413473 EIF3AQ14152 1382 aaKnown RBP19.7■□□□□ 0.74
TTC39A-208ENST00000413473 TET3O43151 1660 aa19.7■□□□□ 0.74
TTC39A-208ENST00000413473 DEKP35659 375 aaKnown RBP19.69■□□□□ 0.74
TTC39A-208ENST00000413473 SKAP1Q86WV1 359 aa19.69■□□□□ 0.74
TTC39A-208ENST00000413473 GOLGA2Q08379 1002 aa19.69■□□□□ 0.74
TTC39A-208ENST00000413473 ZNF521Q96K83 1311 aa19.69■□□□□ 0.74
TTC39A-208ENST00000413473 FANCAO15360 1455 aa19.68■□□□□ 0.74
TTC39A-208ENST00000413473 ATP7AQ04656 1500 aa19.67■□□□□ 0.74
TTC39A-208ENST00000413473 PIK3C2GO75747 1445 aa19.67■□□□□ 0.74
TTC39A-208ENST00000413473 NPC1L1Q9UHC9 1359 aa19.66■□□□□ 0.74
TTC39A-208ENST00000413473 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
TTC39A-208ENST00000413473 ADGRF5Q8IZF2 1346 aa19.66■□□□□ 0.74
TTC39A-208ENST00000413473 VWDEQ8N2E2 1590 aa19.65■□□□□ 0.74
TTC39A-208ENST00000413473 MYOM1P52179 1685 aa19.64■□□□□ 0.73
TTC39A-208ENST00000413473 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
TTC39A-208ENST00000413473 INO80Q9ULG1 1556 aaPredicted RBP19.63■□□□□ 0.73
TTC39A-208ENST00000413473 UGGT1Q9NYU2 1555 aa19.63■□□□□ 0.73
TTC39A-208ENST00000413473 ADGRL1O94910 1474 aa19.62■□□□□ 0.73
TTC39A-208ENST00000413473 APAF1O14727 1248 aa19.62■□□□□ 0.73
TTC39A-208ENST00000413473 SLC24A1O60721 1099 aa19.62■□□□□ 0.73
TTC39A-208ENST00000413473 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
TTC39A-208ENST00000413473 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
TTC39A-208ENST00000413473 ABCA9Q8IUA7 1624 aa19.61■□□□□ 0.73
TTC39A-208ENST00000413473 KDM5AP29375 1690 aaKnown RBP19.61■□□□□ 0.73
TTC39A-208ENST00000413473 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
TTC39A-208ENST00000413473 KDM2BQ8NHM5 1336 aa19.6■□□□□ 0.73
TTC39A-208ENST00000413473 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.6■□□□□ 0.73
TTC39A-208ENST00000413473 SPINK5Q9NQ38 1064 aaPredicted RBP19.6■□□□□ 0.73
TTC39A-208ENST00000413473 TRMT2AQ8IZ69 625 aaKnown RBP19.59■□□□□ 0.73
TTC39A-208ENST00000413473 MAP3K4Q9Y6R4 1608 aa19.59■□□□□ 0.73
TTC39A-208ENST00000413473 RTL5Q5HYW3 569 aaPredicted RBP19.58■□□□□ 0.73
TTC39A-208ENST00000413473 MYOM2P54296 1465 aa19.58■□□□□ 0.72
TTC39A-208ENST00000413473 NEURL4Q96JN8 1562 aa19.58■□□□□ 0.72
TTC39A-208ENST00000413473 MROH1Q8NDA8 1641 aa19.57■□□□□ 0.72
TTC39A-208ENST00000413473 CENPQQ7L2Z9 268 aaPredicted RBP19.57■□□□□ 0.72
TTC39A-208ENST00000413473 ABCA6Q8N139 1617 aa19.57■□□□□ 0.72
TTC39A-208ENST00000413473 KIF1BO60333 1816 aa19.55■□□□□ 0.72
TTC39A-208ENST00000413473 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
TTC39A-208ENST00000413473 EFCAB6Q5THR3 1501 aa19.53■□□□□ 0.72
TTC39A-208ENST00000413473 BCAR3O75815 825 aa19.52■□□□□ 0.72
TTC39A-208ENST00000413473 LAS1LQ9Y4W2 734 aaKnown RBP19.52■□□□□ 0.72
TTC39A-208ENST00000413473 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
TTC39A-208ENST00000413473 E9PSI1 815 aa19.52■□□□□ 0.71
TTC39A-208ENST00000413473 NKTRP30414 1462 aaKnown RBP19.51■□□□□ 0.71
TTC39A-208ENST00000413473 CENPJQ9HC77 1338 aaPredicted RBP19.51■□□□□ 0.71
TTC39A-208ENST00000413473 ASXL2Q76L83 1435 aa19.51■□□□□ 0.71
TTC39A-208ENST00000413473 TRAK1Q9UPV9 953 aa19.51■□□□□ 0.71
TTC39A-208ENST00000413473 NOS1P29475 1434 aa19.5■□□□□ 0.71
TTC39A-208ENST00000413473 KIDINS220Q9ULH0 1771 aa19.49■□□□□ 0.71
TTC39A-208ENST00000413473 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
TTC39A-208ENST00000413473 NRXN1Q9ULB1 1477 aa19.49■□□□□ 0.71
TTC39A-208ENST00000413473 SBNO2Q9Y2G9 1366 aa19.49■□□□□ 0.71
TTC39A-208ENST00000413473 MROH2AA6NES4 1674 aa19.49■□□□□ 0.71
TTC39A-208ENST00000413473 IFT172Q9UG01 1749 aa19.48■□□□□ 0.71
TTC39A-208ENST00000413473 CFAP65Q6ZU64 1925 aaKnown RBP19.48■□□□□ 0.71
TTC39A-208ENST00000413473 NGEFQ8N5V2 710 aa19.48■□□□□ 0.71
TTC39A-208ENST00000413473 DDRGK1Q96HY6 314 aa19.47■□□□□ 0.71
TTC39A-208ENST00000413473 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
TTC39A-208ENST00000413473 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
TTC39A-208ENST00000413473 POLR3AO14802 1390 aaPredicted RBP19.47■□□□□ 0.71
TTC39A-208ENST00000413473 GGT6Q6P531 493 aa19.46■□□□□ 0.71
TTC39A-208ENST00000413473 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
TTC39A-208ENST00000413473 FAM161AQ3B820 660 aa19.45■□□□□ 0.7
TTC39A-208ENST00000413473 TMEM132EQ6IEE7 984 aa19.45■□□□□ 0.7
TTC39A-208ENST00000413473 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
TTC39A-208ENST00000413473 NEFMP07197 916 aa19.45■□□□□ 0.7
TTC39A-208ENST00000413473 RGS3P49796 1198 aa19.45■□□□□ 0.7
TTC39A-208ENST00000413473 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
TTC39A-208ENST00000413473 LMTK2Q8IWU2 1503 aa19.45■□□□□ 0.7
TTC39A-208ENST00000413473 ZNF518AQ6AHZ1 1483 aa19.45■□□□□ 0.7
TTC39A-208ENST00000413473 NSD3Q9BZ95 1437 aa19.44■□□□□ 0.7
TTC39A-208ENST00000413473 MYO3AQ8NEV4 1616 aa19.44■□□□□ 0.7
TTC39A-208ENST00000413473 C8orf34Q49A92 452 aa19.44■□□□□ 0.7
TTC39A-208ENST00000413473 ADGRB3O60242 1522 aa19.43■□□□□ 0.7
TTC39A-208ENST00000413473 NPATQ14207 1427 aa19.42■□□□□ 0.7
TTC39A-208ENST00000413473 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
TTC39A-208ENST00000413473 NEUROD2Q15784 382 aa19.42■□□□□ 0.7
TTC39A-208ENST00000413473 SETBP1Q9Y6X0 1596 aa19.41■□□□□ 0.7
TTC39A-208ENST00000413473 USP35Q9P2H5 1018 aa19.4■□□□□ 0.7
TTC39A-208ENST00000413473 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
TTC39A-208ENST00000413473 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
TTC39A-208ENST00000413473 SLC4A3P48751 1232 aa19.39■□□□□ 0.7
TTC39A-208ENST00000413473 PDE3AQ14432 1141 aa19.39■□□□□ 0.7
TTC39A-208ENST00000413473 IGHDP01880 384 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms