RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 NOS1P29475 1434 aa12.99□□□□□ -0.33
HCG18-234ENST00000413358 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
HCG18-234ENST00000413358 SYNMO15061 1565 aa12.98□□□□□ -0.33
HCG18-234ENST00000413358 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
HCG18-234ENST00000413358 NEUROD1Q13562 356 aa12.97□□□□□ -0.33
HCG18-234ENST00000413358 TXNDC2Q86VQ3 553 aa12.97□□□□□ -0.33
HCG18-234ENST00000413358 CFAP65Q6ZU64 1925 aaKnown RBP12.97□□□□□ -0.33
HCG18-234ENST00000413358 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
HCG18-234ENST00000413358 TONSLQ96HA7 1378 aa12.95□□□□□ -0.34
HCG18-234ENST00000413358 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
HCG18-234ENST00000413358 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
HCG18-234ENST00000413358 SCAF11Q99590 1463 aaKnown RBP12.93□□□□□ -0.34
HCG18-234ENST00000413358 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
HCG18-234ENST00000413358 KIF1BO60333 1816 aa12.92□□□□□ -0.34
HCG18-234ENST00000413358 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
HCG18-234ENST00000413358 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
HCG18-234ENST00000413358 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
HCG18-234ENST00000413358 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
HCG18-234ENST00000413358 LTKP29376 864 aa12.91□□□□□ -0.34
HCG18-234ENST00000413358 BCANQ96GW7 911 aa12.91□□□□□ -0.34
HCG18-234ENST00000413358 SPATA31E1Q6ZUB1 1445 aa12.88□□□□□ -0.35
HCG18-234ENST00000413358 UBR1Q8IWV7 1749 aa12.88□□□□□ -0.35
HCG18-234ENST00000413358 TMEM2Q9UHN6 1383 aa12.87□□□□□ -0.35
HCG18-234ENST00000413358 HDGFP51858 240 aaKnown RBP12.87□□□□□ -0.35
HCG18-234ENST00000413358 IDI1Q13907 227 aa12.87□□□□□ -0.35
HCG18-234ENST00000413358 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
HCG18-234ENST00000413358 TMEM131LA2VDJ0 1609 aa12.87□□□□□ -0.35
HCG18-234ENST00000413358 SLIT1O75093 1534 aa12.87□□□□□ -0.35
HCG18-234ENST00000413358 ARHGAP23Q9P227 1491 aa12.86□□□□□ -0.35
HCG18-234ENST00000413358 RGL3Q3MIN7 710 aa12.86□□□□□ -0.35
HCG18-234ENST00000413358 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
HCG18-234ENST00000413358 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
HCG18-234ENST00000413358 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
HCG18-234ENST00000413358 KCNA6P17658 529 aa12.85□□□□□ -0.35
HCG18-234ENST00000413358 MYO5BQ9ULV0 1848 aa12.84□□□□□ -0.35
HCG18-234ENST00000413358 L3MBTL2Q969R5 705 aa12.84□□□□□ -0.35
HCG18-234ENST00000413358 STRCP1A6NGW2 1772 aa12.84□□□□□ -0.35
HCG18-234ENST00000413358 PPP1R15AO75807 674 aaPredicted RBP12.83□□□□□ -0.36
HCG18-234ENST00000413358 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.36
HCG18-234ENST00000413358 IFT172Q9UG01 1749 aa12.82□□□□□ -0.36
HCG18-234ENST00000413358 ALKQ9UM73 1620 aa12.82□□□□□ -0.36
HCG18-234ENST00000413358 SLC26A8Q96RN1 970 aa12.82□□□□□ -0.36
HCG18-234ENST00000413358 MYOM2P54296 1465 aa12.82□□□□□ -0.36
HCG18-234ENST00000413358 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
HCG18-234ENST00000413358 PPLO60437 1756 aa12.81□□□□□ -0.36
HCG18-234ENST00000413358 FAM135BQ49AJ0 1406 aa12.81□□□□□ -0.36
HCG18-234ENST00000413358 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
HCG18-234ENST00000413358 RPGRIP1LQ68CZ1 1315 aa12.81□□□□□ -0.36
HCG18-234ENST00000413358 RIMS2Q9UQ26 1411 aa12.8□□□□□ -0.36
HCG18-234ENST00000413358 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
HCG18-234ENST00000413358 MSH6P52701 1360 aa12.8□□□□□ -0.36
HCG18-234ENST00000413358 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
HCG18-234ENST00000413358 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
HCG18-234ENST00000413358 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
HCG18-234ENST00000413358 RBM33Q96EV2 1170 aaKnown RBP12.77□□□□□ -0.37
HCG18-234ENST00000413358 STAC3Q96MF2 364 aa12.77□□□□□ -0.37
HCG18-234ENST00000413358 ZFYVE9O95405 1425 aa12.77□□□□□ -0.37
HCG18-234ENST00000413358 SLAIN2Q9P270 581 aa12.76□□□□□ -0.37
HCG18-234ENST00000413358 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
HCG18-234ENST00000413358 NKTRP30414 1462 aaKnown RBP12.75□□□□□ -0.37
HCG18-234ENST00000413358 NUTM2DQ5VT03 806 aaPredicted RBP12.75□□□□□ -0.37
HCG18-234ENST00000413358 RALGAPBQ86X10 1494 aa12.75□□□□□ -0.37
HCG18-234ENST00000413358 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
HCG18-234ENST00000413358 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
HCG18-234ENST00000413358 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
HCG18-234ENST00000413358 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
HCG18-234ENST00000413358 LAMC1P11047 1609 aa12.73□□□□□ -0.37
HCG18-234ENST00000413358 PLEKHG1Q9ULL1 1385 aa12.73□□□□□ -0.37
HCG18-234ENST00000413358 XIRP1Q702N8 1843 aaKnown RBP12.73□□□□□ -0.37
HCG18-234ENST00000413358 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
HCG18-234ENST00000413358 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
HCG18-234ENST00000413358 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.37
HCG18-234ENST00000413358 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
HCG18-234ENST00000413358 ROBO1Q9Y6N7 1651 aa12.71□□□□□ -0.37
HCG18-234ENST00000413358 ATF3P18847 181 aa12.71□□□□□ -0.37
HCG18-234ENST00000413358 NBPF8Q3BBV2 869 aa12.71□□□□□ -0.37
HCG18-234ENST00000413358 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.37
HCG18-234ENST00000413358 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
HCG18-234ENST00000413358 JCADQ9P266 1359 aa12.7□□□□□ -0.38
HCG18-234ENST00000413358 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
HCG18-234ENST00000413358 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
HCG18-234ENST00000413358 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
HCG18-234ENST00000413358 DIP2AQ14689 1571 aa12.69□□□□□ -0.38
HCG18-234ENST00000413358 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
HCG18-234ENST00000413358 C19orf44Q9H6X5 657 aa12.68□□□□□ -0.38
HCG18-234ENST00000413358 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
HCG18-234ENST00000413358 PIK3R4Q99570 1358 aa12.67□□□□□ -0.38
HCG18-234ENST00000413358 SPATA31A6Q5VVP1 1343 aa12.66□□□□□ -0.38
HCG18-234ENST00000413358 PHLPP1O60346 1717 aa12.66□□□□□ -0.38
HCG18-234ENST00000413358 CFAP70Q5T0N1 1121 aa12.66□□□□□ -0.38
HCG18-234ENST00000413358 ZNF772Q68DY9 489 aaPredicted RBP12.66□□□□□ -0.38
HCG18-234ENST00000413358 CARD11Q9BXL7 1154 aa12.66□□□□□ -0.38
HCG18-234ENST00000413358 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
HCG18-234ENST00000413358 ASXL1Q8IXJ9 1541 aa12.65□□□□□ -0.38
HCG18-234ENST00000413358 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
HCG18-234ENST00000413358 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
HCG18-234ENST00000413358 ADAMTS13Q76LX8 1427 aa12.64□□□□□ -0.39
HCG18-234ENST00000413358 C14orf93Q9H972 538 aaKnown RBP12.64□□□□□ -0.39
HCG18-234ENST00000413358 AMOTL2Q9Y2J4 779 aa12.64□□□□□ -0.39
HCG18-234ENST00000413358 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms