RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 UQCRHLA0A096LP55 91 aa6.57□□□□□ -1.36
HERC4-205ENST00000412272 UQCRHP07919 91 aa6.57□□□□□ -1.36
HERC4-205ENST00000412272 SLC4A3P48751 1232 aa6.57□□□□□ -1.36
HERC4-205ENST00000412272 NECTIN2Q92692 538 aa6.57□□□□□ -1.36
HERC4-205ENST00000412272 KDM2AQ9Y2K7 1162 aa6.57□□□□□ -1.36
HERC4-205ENST00000412272 CCDC172P0C7W6 258 aa6.57□□□□□ -1.36
HERC4-205ENST00000412272 CBX1P83916 185 aa6.57□□□□□ -1.36
HERC4-205ENST00000412272 ATP2B3Q16720 1220 aa6.56□□□□□ -1.36
HERC4-205ENST00000412272 SMARCA4P51532 1647 aa6.56□□□□□ -1.36
HERC4-205ENST00000412272 HECW1Q76N89 1606 aa6.56□□□□□ -1.36
HERC4-205ENST00000412272 SIN3AQ96ST3 1273 aa6.56□□□□□ -1.36
HERC4-205ENST00000412272 MYCBPQ99417 103 aaPredicted RBP6.56□□□□□ -1.36
HERC4-205ENST00000412272 ARID4AP29374 1257 aaPredicted RBP6.55□□□□□ -1.36
HERC4-205ENST00000412272 NCAPGQ9BPX3 1015 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 TERF2IPQ9NYB0 399 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 PHLDB1Q86UU1 1377 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 NBPF6Q5VWK0 638 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 NBPF5PQ86XG9 351 aaPredicted RBP6.55□□□□□ -1.36
HERC4-205ENST00000412272 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
HERC4-205ENST00000412272 ZNF428Q96B54 188 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 NBPF4Q96M43 638 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 KIF16BQ96L93 1317 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 TOP2BQ02880 1626 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 SMC4Q9NTJ3 1288 aa6.55□□□□□ -1.36
HERC4-205ENST00000412272 NOP2P46087 812 aaKnown RBP6.54□□□□□ -1.36
HERC4-205ENST00000412272 ZKSCAN8Q15776 578 aaPredicted RBP6.54□□□□□ -1.36
HERC4-205ENST00000412272 BSDC1Q9NW68 430 aaPredicted RBP6.54□□□□□ -1.36
HERC4-205ENST00000412272 ZBTB12Q9Y330 459 aaPredicted RBP6.54□□□□□ -1.36
HERC4-205ENST00000412272 TSPYL1Q9H0U9 437 aa6.54□□□□□ -1.36
HERC4-205ENST00000412272 R3HCC1Q9Y3T6 440 aaKnown RBP6.54□□□□□ -1.36
HERC4-205ENST00000412272 MRE11P49959 708 aa6.54□□□□□ -1.36
HERC4-205ENST00000412272 PRKRIP1Q9H875 184 aaPredicted RBP6.54□□□□□ -1.36
HERC4-205ENST00000412272 TSHZ1Q6ZSZ6 1077 aa6.53□□□□□ -1.36
HERC4-205ENST00000412272 TIGD1Q96MW7 591 aa6.53□□□□□ -1.36
HERC4-205ENST00000412272 MYH16Q9H6N6 1097 aa6.53□□□□□ -1.36
HERC4-205ENST00000412272 CCDC189A1A4V9 331 aa6.53□□□□□ -1.36
HERC4-205ENST00000412272 UACAQ9BZF9 1416 aa6.53□□□□□ -1.36
HERC4-205ENST00000412272 RINLQ6ZS11 566 aa6.53□□□□□ -1.36
HERC4-205ENST00000412272 FAM177A1Q8N128 213 aaPredicted RBP6.53□□□□□ -1.36
HERC4-205ENST00000412272 FEZ2Q9UHY8 353 aaPredicted RBP6.52□□□□□ -1.36
HERC4-205ENST00000412272 LRPPRCP42704 1394 aaKnown RBP6.52□□□□□ -1.37
HERC4-205ENST00000412272 GCC2Q8IWJ2 1684 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 KDM4AO75164 1064 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 CASC1Q6TDU7 716 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 ANKRD23Q86SG2 305 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 ZNF710Q8N1W2 664 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 CALR3Q96L12 384 aaKnown RBP6.52□□□□□ -1.37
HERC4-205ENST00000412272 PTPN23Q9H3S7 1636 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 MTA1Q13330 715 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 DONSONQ9NYP3 566 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 ZMYM3Q14202 1370 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 CCDC18Q5T9S5 1454 aa6.52□□□□□ -1.37
HERC4-205ENST00000412272 CT47B1P0C2W7 299 aaPredicted RBP6.52□□□□□ -1.37
HERC4-205ENST00000412272 ZC3H12AQ5D1E8 599 aaKnown RBP6.52□□□□□ -1.37
HERC4-205ENST00000412272 E9PCH4 1651 aa6.51□□□□□ -1.37
HERC4-205ENST00000412272 LRRC9Q6ZRR7 1453 aa6.51□□□□□ -1.37
HERC4-205ENST00000412272 SPINK5Q9NQ38 1064 aaPredicted RBP6.51□□□□□ -1.37
HERC4-205ENST00000412272 CFAP65Q6ZU64 1925 aaKnown RBP6.51□□□□□ -1.37
HERC4-205ENST00000412272 DNAJC21Q5F1R6 531 aaKnown RBP6.51□□□□□ -1.37
HERC4-205ENST00000412272 KANK4Q5T7N3 995 aaPredicted RBP6.51□□□□□ -1.37
HERC4-205ENST00000412272 ZSCAN30Q86W11 494 aa6.51□□□□□ -1.37
HERC4-205ENST00000412272 PNISRQ8TF01 805 aaKnown RBP6.51□□□□□ -1.37
HERC4-205ENST00000412272 ITFG2Q969R8 447 aa6.51□□□□□ -1.37
HERC4-205ENST00000412272 IGF1RP08069 1367 aa6.51□□□□□ -1.37
HERC4-205ENST00000412272 KIF3AQ9Y496 699 aa6.51□□□□□ -1.37
HERC4-205ENST00000412272 SPATA31E1Q6ZUB1 1445 aa6.5□□□□□ -1.37
HERC4-205ENST00000412272 ZNF771Q7L3S4 317 aaPredicted RBP6.5□□□□□ -1.37
HERC4-205ENST00000412272 CCDC7Q96M83 1385 aa6.5□□□□□ -1.37
HERC4-205ENST00000412272 HSP90AB4PQ58FF6 505 aa6.5□□□□□ -1.37
HERC4-205ENST00000412272 GRPEL1Q9HAV7 217 aa6.5□□□□□ -1.37
HERC4-205ENST00000412272 KDM2BQ8NHM5 1336 aa6.5□□□□□ -1.37
HERC4-205ENST00000412272 KTN1Q86UP2 1357 aaKnown RBP6.5□□□□□ -1.37
HERC4-205ENST00000412272 PRDM2Q13029 1718 aa6.5□□□□□ -1.37
HERC4-205ENST00000412272 ARHGAP35Q9NRY4 1499 aa6.5□□□□□ -1.37
HERC4-205ENST00000412272 CCDC66A2RUB6 948 aa6.49□□□□□ -1.37
HERC4-205ENST00000412272 SSR1P43307 286 aaKnown RBP6.49□□□□□ -1.37
HERC4-205ENST00000412272 RRP1P56182 461 aaKnown RBP6.49□□□□□ -1.37
HERC4-205ENST00000412272 ARMCX6Q7L4S7 300 aa6.49□□□□□ -1.37
HERC4-205ENST00000412272 HFM1A2PYH4 1435 aa6.49□□□□□ -1.37
HERC4-205ENST00000412272 NLRP1Q9C000 1473 aa6.49□□□□□ -1.37
HERC4-205ENST00000412272 GTF2A1P52655 376 aaPredicted RBP6.49□□□□□ -1.37
HERC4-205ENST00000412272 RPS6KL1Q9Y6S9 549 aa6.49□□□□□ -1.37
HERC4-205ENST00000412272 MFAP1P55081 439 aaKnown RBP6.49□□□□□ -1.37
HERC4-205ENST00000412272 C1QTNF12Q5T7M4 302 aa6.49□□□□□ -1.37
HERC4-205ENST00000412272 ARHGEF1Q92888 912 aaKnown RBP6.49□□□□□ -1.37
HERC4-205ENST00000412272 IPO8O15397 1037 aaKnown RBP6.48□□□□□ -1.37
HERC4-205ENST00000412272 DHX16O60231 1041 aaKnown RBP6.48□□□□□ -1.37
HERC4-205ENST00000412272 SLFN14P0C7P3 912 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 FOXD4L6Q3SYB3 417 aaPredicted RBP6.48□□□□□ -1.37
HERC4-205ENST00000412272 FOXD4L3Q6VB84 417 aaPredicted RBP6.48□□□□□ -1.37
HERC4-205ENST00000412272 ROCK2O75116 1388 aaKnown RBP6.48□□□□□ -1.37
HERC4-205ENST00000412272 DHX29Q7Z478 1369 aaKnown RBP6.48□□□□□ -1.37
HERC4-205ENST00000412272 TONSLQ96HA7 1378 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 ARHGAP31Q2M1Z3 1444 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 FBLN2P98095 1184 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 MIA2Q96PC5 1412 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 ZNF853P0CG23 659 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 CCDC184Q52MB2 194 aa6.48□□□□□ -1.37
HERC4-205ENST00000412272 SASS6Q6UVJ0 657 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms