RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TLL1O43897 1013 aa7.67□□□□□ -1.18
HMGB3P2-201ENST00000411913 DGAT1O75907 488 aa7.67□□□□□ -1.18
HMGB3P2-201ENST00000411913 DNAJB2P25686 324 aa7.67□□□□□ -1.18
HMGB3P2-201ENST00000411913 KMT5BQ4FZB7 885 aa7.67□□□□□ -1.18
HMGB3P2-201ENST00000411913 SPRYD7Q5W111 196 aa7.67□□□□□ -1.18
HMGB3P2-201ENST00000411913 ZNF598Q86UK7 904 aaKnown RBP7.66□□□□□ -1.18
HMGB3P2-201ENST00000411913 ANKLE1Q8NAG6 615 aa7.66□□□□□ -1.18
HMGB3P2-201ENST00000411913 RBM46Q8TBY0 533 aaKnown RBP7.66□□□□□ -1.18
HMGB3P2-201ENST00000411913 PPEF1O14829 653 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P2-201ENST00000411913 S1PR4O95977 384 aa7.65□□□□□ -1.18
HMGB3P2-201ENST00000411913 MYT1Q01538 1121 aa7.65□□□□□ -1.18
HMGB3P2-201ENST00000411913 ZNF697Q5TEC3 545 aa7.64□□□□□ -1.19
HMGB3P2-201ENST00000411913 EMID1Q96A84 441 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P2-201ENST00000411913 FAM187AA6NFU0 413 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 TNFRSF10AO00220 468 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 ACTN4O43707 911 aaKnown RBP7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 PRR20EP86478 221 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 PRR20CP86479 221 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 PRR20DP86480 221 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 PRR20BP86481 221 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 PRR20AP86496 221 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 TMEM134Q9H6X4 195 aa7.63□□□□□ -1.19
HMGB3P2-201ENST00000411913 NR1I2O75469 434 aa7.62□□□□□ -1.19
HMGB3P2-201ENST00000411913 CFHP08603 1231 aa7.62□□□□□ -1.19
HMGB3P2-201ENST00000411913 PTGDRQ13258 359 aa7.62□□□□□ -1.19
HMGB3P2-201ENST00000411913 LIAT1Q6ZQX7 453 aa7.62□□□□□ -1.19
HMGB3P2-201ENST00000411913 NUTM2FA1L443 756 aa7.61□□□□□ -1.19
HMGB3P2-201ENST00000411913 RCCD1A6NED2 376 aa7.61□□□□□ -1.19
HMGB3P2-201ENST00000411913 ADH1BP00325 375 aa7.61□□□□□ -1.19
HMGB3P2-201ENST00000411913 MLLT3P42568 568 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P2-201ENST00000411913 ADGRG1Q9Y653 693 aa7.61□□□□□ -1.19
HMGB3P2-201ENST00000411913 POTECB2RU33 542 aa7.6□□□□□ -1.19
HMGB3P2-201ENST00000411913 FAM161AQ3B820 660 aa7.59□□□□□ -1.19
HMGB3P2-201ENST00000411913 ARHGEF1Q92888 912 aaKnown RBP7.59□□□□□ -1.19
HMGB3P2-201ENST00000411913 SLC6A16Q9GZN6 736 aa7.59□□□□□ -1.19
HMGB3P2-201ENST00000411913 GDF9O60383 454 aa7.58□□□□□ -1.2
HMGB3P2-201ENST00000411913 FOXC1Q12948 553 aa7.56□□□□□ -1.2
HMGB3P2-201ENST00000411913 RSPH4AQ5TD94 716 aa7.56□□□□□ -1.2
HMGB3P2-201ENST00000411913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.55□□□□□ -1.2
HMGB3P2-201ENST00000411913 ST8SIA5O15466 376 aa7.55□□□□□ -1.2
HMGB3P2-201ENST00000411913 SLC10A3P09131 477 aa7.55□□□□□ -1.2
HMGB3P2-201ENST00000411913 SCUBE3Q8IX30 993 aa7.55□□□□□ -1.2
HMGB3P2-201ENST00000411913 PLA2G2CQ5R387 149 aa7.54□□□□□ -1.2
HMGB3P2-201ENST00000411913 SPSB2Q99619 263 aa7.54□□□□□ -1.2
HMGB3P2-201ENST00000411913 AAASQ9NRG9 546 aa7.54□□□□□ -1.2
HMGB3P2-201ENST00000411913 FCHSD2O94868 740 aa7.53□□□□□ -1.2
HMGB3P2-201ENST00000411913 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
HMGB3P2-201ENST00000411913 OATP04181 439 aa7.52□□□□□ -1.21
HMGB3P2-201ENST00000411913 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
HMGB3P2-201ENST00000411913 KCNV2Q8TDN2 545 aa7.52□□□□□ -1.21
HMGB3P2-201ENST00000411913 LMOD2Q6P5Q4 547 aa7.51□□□□□ -1.21
HMGB3P2-201ENST00000411913 CD2BP2O95400 341 aaKnown RBP7.5□□□□□ -1.21
HMGB3P2-201ENST00000411913 AMER1Q5JTC6 1135 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P2-201ENST00000411913 PKD2L1Q9P0L9 805 aa7.5□□□□□ -1.21
HMGB3P2-201ENST00000411913 CYP4X1Q8N118 509 aa7.49□□□□□ -1.21
HMGB3P2-201ENST00000411913 PXYLP1Q8TE99 480 aa7.49□□□□□ -1.21
HMGB3P2-201ENST00000411913 RPIAP49247 311 aa7.48□□□□□ -1.21
HMGB3P2-201ENST00000411913 RDH13Q8NBN7 331 aa7.48□□□□□ -1.21
HMGB3P2-201ENST00000411913 AXIN1O15169 862 aa7.47□□□□□ -1.21
HMGB3P2-201ENST00000411913 TSHZ2Q9NRE2 1034 aa7.47□□□□□ -1.21
HMGB3P2-201ENST00000411913 FCF1Q9Y324 198 aaKnown RBP7.47□□□□□ -1.21
HMGB3P2-201ENST00000411913 C11orf95C9JLR9 678 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P2-201ENST00000411913 CRIPAKQ8N1N5 446 aa7.46□□□□□ -1.22
HMGB3P2-201ENST00000411913 DACH1Q9UI36 760 aa7.46□□□□□ -1.22
HMGB3P2-201ENST00000411913 WFS1O76024 890 aa7.45□□□□□ -1.22
HMGB3P2-201ENST00000411913 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
HMGB3P2-201ENST00000411913 TTC24A2A3L6 582 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 ZBTB24O43167 697 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 FMNL1O95466 1100 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 HIC1Q14526 733 aa7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 MORN1Q5T089 497 aa7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 TOR4AQ9NXH8 423 aa7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 GMPR2Q9P2T1 348 aaKnown RBP7.44□□□□□ -1.22
HMGB3P2-201ENST00000411913 DDX11L8A8MPP1 907 aa7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 SEMA3EO15041 775 aa7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 AVPP01185 164 aa7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 ATP6V1AP38606 617 aa7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 FUT2Q10981 343 aa7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 CTC1Q2NKJ3 1217 aa7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 P3H3Q8IVL6 736 aa7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 RTN4Q9NQC3 1192 aaKnown RBP7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 DAXXQ9UER7 740 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P2-201ENST00000411913 FAM160A2Q8N612 972 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P2-201ENST00000411913 THAP11Q96EK4 314 aa7.41□□□□□ -1.22
HMGB3P2-201ENST00000411913 SLC27A5Q9Y2P5 690 aa7.41□□□□□ -1.22
HMGB3P2-201ENST00000411913 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P2-201ENST00000411913 SULF1Q8IWU6 871 aa7.39□□□□□ -1.23
HMGB3P2-201ENST00000411913 PRDM9Q9NQV7 894 aa7.39□□□□□ -1.23
HMGB3P2-201ENST00000411913 GNPATO15228 680 aa7.38□□□□□ -1.23
HMGB3P2-201ENST00000411913 FECHP22830 423 aa7.38□□□□□ -1.23
HMGB3P2-201ENST00000411913 GCGRP47871 477 aa7.38□□□□□ -1.23
HMGB3P2-201ENST00000411913 RBM26Q5T8P6 1007 aaKnown RBP7.38□□□□□ -1.23
HMGB3P2-201ENST00000411913 SALL2Q9Y467 1007 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P2-201ENST00000411913 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
HMGB3P2-201ENST00000411913 SMYD5Q6GMV2 418 aa7.37□□□□□ -1.23
HMGB3P2-201ENST00000411913 BRICD5Q6PL45 260 aa7.37□□□□□ -1.23
HMGB3P2-201ENST00000411913 NLRP7Q8WX94 980 aa7.37□□□□□ -1.23
HMGB3P2-201ENST00000411913 STK17AQ9UEE5 414 aa7.37□□□□□ -1.23
HMGB3P2-201ENST00000411913 INSM1Q01101 510 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms