RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
CCDC196-203ENST00000411796 GLI2P10070 1586 aa13.06□□□□□ -0.32
CCDC196-203ENST00000411796 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
CCDC196-203ENST00000411796 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
CCDC196-203ENST00000411796 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
CCDC196-203ENST00000411796 PLCH2O75038 1416 aa13.04□□□□□ -0.32
CCDC196-203ENST00000411796 DPYSL4O14531 572 aa13.03□□□□□ -0.32
CCDC196-203ENST00000411796 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
CCDC196-203ENST00000411796 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
CCDC196-203ENST00000411796 ARIH1Q9Y4X5 557 aaPredicted RBP13.03□□□□□ -0.32
CCDC196-203ENST00000411796 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
CCDC196-203ENST00000411796 CDK13Q14004 1512 aaKnown RBP13.03□□□□□ -0.32
CCDC196-203ENST00000411796 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
CCDC196-203ENST00000411796 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
CCDC196-203ENST00000411796 ACIN1Q9UKV3 1341 aaKnown RBP13.02□□□□□ -0.33
CCDC196-203ENST00000411796 ARSIQ5FYB1 569 aa13.01□□□□□ -0.33
CCDC196-203ENST00000411796 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
CCDC196-203ENST00000411796 KCNH8Q96L42 1107 aa13.01□□□□□ -0.33
CCDC196-203ENST00000411796 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
CCDC196-203ENST00000411796 NCOA2Q15596 1464 aa13□□□□□ -0.33
CCDC196-203ENST00000411796 RIMBP2O15034 1052 aa13□□□□□ -0.33
CCDC196-203ENST00000411796 KHSRPQ92945 711 aaKnown RBP eCLIP13□□□□□ -0.33
CCDC196-203ENST00000411796 MAGI3Q5TCQ9 1506 aa12.99□□□□□ -0.33
CCDC196-203ENST00000411796 KIAA1107Q9UPP5 1409 aa12.99□□□□□ -0.33
CCDC196-203ENST00000411796 TBC1D12O60347 775 aa12.99□□□□□ -0.33
CCDC196-203ENST00000411796 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
CCDC196-203ENST00000411796 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
CCDC196-203ENST00000411796 CFDP1Q9UEE9 299 aaPredicted RBP12.99□□□□□ -0.33
CCDC196-203ENST00000411796 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
CCDC196-203ENST00000411796 KIF14Q15058 1648 aa12.99□□□□□ -0.33
CCDC196-203ENST00000411796 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
CCDC196-203ENST00000411796 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
CCDC196-203ENST00000411796 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
CCDC196-203ENST00000411796 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
CCDC196-203ENST00000411796 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
CCDC196-203ENST00000411796 DISP3Q9P2K9 1392 aa12.97□□□□□ -0.33
CCDC196-203ENST00000411796 ABCA9Q8IUA7 1624 aa12.97□□□□□ -0.33
CCDC196-203ENST00000411796 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
CCDC196-203ENST00000411796 ARID3CA6NKF2 412 aa12.96□□□□□ -0.33
CCDC196-203ENST00000411796 ST18O60284 1047 aa12.96□□□□□ -0.33
CCDC196-203ENST00000411796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC196-203ENST00000411796 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
CCDC196-203ENST00000411796 NEO1Q92859 1461 aa12.95□□□□□ -0.34
CCDC196-203ENST00000411796 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
CCDC196-203ENST00000411796 EVI5O60447 810 aa12.94□□□□□ -0.34
CCDC196-203ENST00000411796 NUDT7P0C024 238 aa12.93□□□□□ -0.34
CCDC196-203ENST00000411796 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
CCDC196-203ENST00000411796 BCANQ96GW7 911 aa12.93□□□□□ -0.34
CCDC196-203ENST00000411796 HRCP23327 699 aa12.92□□□□□ -0.34
CCDC196-203ENST00000411796 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
CCDC196-203ENST00000411796 TCOF1Q13428 1488 aaKnown RBP12.91□□□□□ -0.34
CCDC196-203ENST00000411796 PDIA6Q15084 440 aa12.91□□□□□ -0.34
CCDC196-203ENST00000411796 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
CCDC196-203ENST00000411796 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
CCDC196-203ENST00000411796 TSPY4P0CV99 314 aa12.9□□□□□ -0.34
CCDC196-203ENST00000411796 TSPY10P0CW01 314 aa12.9□□□□□ -0.34
CCDC196-203ENST00000411796 LCE2DQ5TA82 110 aaPredicted RBP12.9□□□□□ -0.34
CCDC196-203ENST00000411796 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
CCDC196-203ENST00000411796 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
CCDC196-203ENST00000411796 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
CCDC196-203ENST00000411796 SEMA3EO15041 775 aa12.88□□□□□ -0.35
CCDC196-203ENST00000411796 ITSN2Q9NZM3 1697 aa12.88□□□□□ -0.35
CCDC196-203ENST00000411796 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
CCDC196-203ENST00000411796 FANCAO15360 1455 aa12.87□□□□□ -0.35
CCDC196-203ENST00000411796 RTEL1-TNFRSF6BF6WH68 1400 aa12.87□□□□□ -0.35
CCDC196-203ENST00000411796 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
CCDC196-203ENST00000411796 MARVELD3Q96A59 401 aa12.86□□□□□ -0.35
CCDC196-203ENST00000411796 MBD5Q9P267 1494 aa12.85□□□□□ -0.35
CCDC196-203ENST00000411796 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
CCDC196-203ENST00000411796 LHX6Q9UPM6 363 aa12.84□□□□□ -0.35
CCDC196-203ENST00000411796 ROCK1Q13464 1354 aa12.83□□□□□ -0.36
CCDC196-203ENST00000411796 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
CCDC196-203ENST00000411796 NBR1Q14596 966 aa12.83□□□□□ -0.36
CCDC196-203ENST00000411796 MAGI2Q86UL8 1455 aa12.83□□□□□ -0.36
CCDC196-203ENST00000411796 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.36
CCDC196-203ENST00000411796 ARHGEF5Q12774 1597 aa12.82□□□□□ -0.36
CCDC196-203ENST00000411796 MLLT3P42568 568 aaPredicted RBP12.82□□□□□ -0.36
CCDC196-203ENST00000411796 PTGER2P43116 358 aa12.82□□□□□ -0.36
CCDC196-203ENST00000411796 CDC42BPAQ5VT25 1732 aa12.82□□□□□ -0.36
CCDC196-203ENST00000411796 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
CCDC196-203ENST00000411796 DDX12PQ92771 950 aa12.81□□□□□ -0.36
CCDC196-203ENST00000411796 CDC42BPBQ9Y5S2 1711 aa12.81□□□□□ -0.36
CCDC196-203ENST00000411796 SCAPERQ9BY12 1400 aa12.8□□□□□ -0.36
CCDC196-203ENST00000411796 DENND4BO75064 1496 aaPredicted RBP12.8□□□□□ -0.36
CCDC196-203ENST00000411796 ZNF518AQ6AHZ1 1483 aa12.8□□□□□ -0.36
CCDC196-203ENST00000411796 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
CCDC196-203ENST00000411796 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
CCDC196-203ENST00000411796 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
CCDC196-203ENST00000411796 ZNF777Q9ULD5 760 aaPredicted RBP12.8□□□□□ -0.36
CCDC196-203ENST00000411796 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
CCDC196-203ENST00000411796 MLH3Q9UHC1 1453 aa12.79□□□□□ -0.36
CCDC196-203ENST00000411796 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
CCDC196-203ENST00000411796 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC196-203ENST00000411796 EMP3P54852 163 aa12.79□□□□□ -0.36
CCDC196-203ENST00000411796 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
CCDC196-203ENST00000411796 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
CCDC196-203ENST00000411796 GRXCR2A6NFK2 248 aa12.78□□□□□ -0.36
CCDC196-203ENST00000411796 ZNF644Q9H582 1327 aaPredicted RBP12.78□□□□□ -0.36
CCDC196-203ENST00000411796 ABCC5O15440 1437 aa12.78□□□□□ -0.36
CCDC196-203ENST00000411796 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms