RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 TLL1O43897 1013 aa8.36□□□□□ -1.07
RNU4-61P-201ENST00000411243 TSR1Q2NL82 804 aaKnown RBP8.36□□□□□ -1.07
RNU4-61P-201ENST00000411243 HS6ST3Q8IZP7 471 aa8.36□□□□□ -1.07
RNU4-61P-201ENST00000411243 S1PR4O95977 384 aa8.35□□□□□ -1.07
RNU4-61P-201ENST00000411243 PRSS12P56730 875 aa8.35□□□□□ -1.07
RNU4-61P-201ENST00000411243 EN1Q05925 392 aaPredicted RBP8.35□□□□□ -1.07
RNU4-61P-201ENST00000411243 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
RNU4-61P-201ENST00000411243 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
RNU4-61P-201ENST00000411243 HDGFP51858 240 aaKnown RBP8.34□□□□□ -1.07
RNU4-61P-201ENST00000411243 TRIM47Q96LD4 638 aa8.34□□□□□ -1.07
RNU4-61P-201ENST00000411243 GMPRP36959 345 aa8.33□□□□□ -1.08
RNU4-61P-201ENST00000411243 FOXC1Q12948 553 aa8.33□□□□□ -1.08
RNU4-61P-201ENST00000411243 PLA2G2CQ5R387 149 aa8.33□□□□□ -1.08
RNU4-61P-201ENST00000411243 PCDHB3Q9Y5E6 796 aa8.33□□□□□ -1.08
RNU4-61P-201ENST00000411243 BLOC1S3Q6QNY0 202 aa8.32□□□□□ -1.08
RNU4-61P-201ENST00000411243 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
RNU4-61P-201ENST00000411243 MAP3K7O43318 606 aa8.31□□□□□ -1.08
RNU4-61P-201ENST00000411243 KCTD17Q8N5Z5 321 aa8.31□□□□□ -1.08
RNU4-61P-201ENST00000411243 PRR14Q9BWN1 585 aa8.31□□□□□ -1.08
RNU4-61P-201ENST00000411243 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
RNU4-61P-201ENST00000411243 SLC16A10Q8TF71 515 aa8.29□□□□□ -1.08
RNU4-61P-201ENST00000411243 SENP2Q9HC62 589 aa8.29□□□□□ -1.08
RNU4-61P-201ENST00000411243 RYDENQ9NUL5 291 aaKnown RBP8.29□□□□□ -1.08
RNU4-61P-201ENST00000411243 PKD2Q13563 968 aa8.28□□□□□ -1.08
RNU4-61P-201ENST00000411243 SWT1Q5T5J6 900 aaKnown RBP8.28□□□□□ -1.08
RNU4-61P-201ENST00000411243 DDX12PQ92771 950 aa8.28□□□□□ -1.08
RNU4-61P-201ENST00000411243 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
RNU4-61P-201ENST00000411243 NUDT18Q6ZVK8 323 aa8.27□□□□□ -1.09
RNU4-61P-201ENST00000411243 CYP4X1Q8N118 509 aa8.27□□□□□ -1.09
RNU4-61P-201ENST00000411243 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
RNU4-61P-201ENST00000411243 XP32Q5T750 250 aa8.26□□□□□ -1.09
RNU4-61P-201ENST00000411243 GSK3AP49840 483 aa8.25□□□□□ -1.09
RNU4-61P-201ENST00000411243 KCNMA1Q12791 1236 aa8.25□□□□□ -1.09
RNU4-61P-201ENST00000411243 NBR1Q14596 966 aa8.25□□□□□ -1.09
RNU4-61P-201ENST00000411243 NKX1-1Q15270 411 aaPredicted RBP8.25□□□□□ -1.09
RNU4-61P-201ENST00000411243 ADH1BP00325 375 aa8.23□□□□□ -1.09
RNU4-61P-201ENST00000411243 IRF7Q92985 503 aa8.23□□□□□ -1.09
RNU4-61P-201ENST00000411243 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
RNU4-61P-201ENST00000411243 DNAJC5Q9H3Z4 198 aa8.23□□□□□ -1.09
RNU4-61P-201ENST00000411243 DPYSL4O14531 572 aa8.22□□□□□ -1.09
RNU4-61P-201ENST00000411243 NPAS3Q8IXF0 933 aa8.21□□□□□ -1.1
RNU4-61P-201ENST00000411243 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
RNU4-61P-201ENST00000411243 NXF1Q9UBU9 619 aaKnown RBP8.21□□□□□ -1.1
RNU4-61P-201ENST00000411243 SLC4A3P48751 1232 aa8.2□□□□□ -1.1
RNU4-61P-201ENST00000411243 RPIAP49247 311 aa8.2□□□□□ -1.1
RNU4-61P-201ENST00000411243 CAMK2BQ13554 666 aa8.19□□□□□ -1.1
RNU4-61P-201ENST00000411243 SLC6A16Q9GZN6 736 aa8.19□□□□□ -1.1
RNU4-61P-201ENST00000411243 ERBB4Q15303 1308 aa8.15□□□□□ -1.1
RNU4-61P-201ENST00000411243 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
RNU4-61P-201ENST00000411243 H3BM21 787 aa8.15□□□□□ -1.1
RNU4-61P-201ENST00000411243 SMPD1P17405 629 aa8.15□□□□□ -1.1
RNU4-61P-201ENST00000411243 TTC24A2A3L6 582 aaPredicted RBP8.14□□□□□ -1.11
RNU4-61P-201ENST00000411243 ACTN4O43707 911 aaKnown RBP8.13□□□□□ -1.11
RNU4-61P-201ENST00000411243 TMEM151AQ8N4L1 468 aa8.13□□□□□ -1.11
RNU4-61P-201ENST00000411243 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
RNU4-61P-201ENST00000411243 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
RNU4-61P-201ENST00000411243 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
RNU4-61P-201ENST00000411243 CD2BP2O95400 341 aaKnown RBP8.11□□□□□ -1.11
RNU4-61P-201ENST00000411243 GDF11O95390 407 aa8.1□□□□□ -1.11
RNU4-61P-201ENST00000411243 CHGAP10645 457 aaKnown RBP8.1□□□□□ -1.11
RNU4-61P-201ENST00000411243 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.11
RNU4-61P-201ENST00000411243 NR1I2O75469 434 aa8.09□□□□□ -1.11
RNU4-61P-201ENST00000411243 VEGFBP49765 207 aa8.09□□□□□ -1.11
RNU4-61P-201ENST00000411243 RASSF7Q02833 373 aa8.08□□□□□ -1.12
RNU4-61P-201ENST00000411243 PDIA6Q15084 440 aa8.08□□□□□ -1.12
RNU4-61P-201ENST00000411243 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
RNU4-61P-201ENST00000411243 CDHR5Q9HBB8 845 aa8.08□□□□□ -1.12
RNU4-61P-201ENST00000411243 SNIP1Q8TAD8 396 aaKnown RBP8.07□□□□□ -1.12
RNU4-61P-201ENST00000411243 EYA1Q99502 592 aa8.06□□□□□ -1.12
RNU4-61P-201ENST00000411243 WNT7AO00755 349 aa8.04□□□□□ -1.12
RNU4-61P-201ENST00000411243 PADI6Q6TGC4 694 aa8.04□□□□□ -1.12
RNU4-61P-201ENST00000411243 FCF1Q9Y324 198 aaKnown RBP8.04□□□□□ -1.12
RNU4-61P-201ENST00000411243 CFHP08603 1231 aa8.03□□□□□ -1.12
RNU4-61P-201ENST00000411243 KRTAP1-3Q8IUG1 177 aa8.03□□□□□ -1.12
RNU4-61P-201ENST00000411243 HPS1Q92902 700 aa8.03□□□□□ -1.12
RNU4-61P-201ENST00000411243 PSMG3-AS1Q96PY0 264 aa8.03□□□□□ -1.12
RNU4-61P-201ENST00000411243 J3QL48 77 aa8.02□□□□□ -1.13
RNU4-61P-201ENST00000411243 RNF225M0QZC1 329 aaPredicted RBP8.01□□□□□ -1.13
RNU4-61P-201ENST00000411243 IGHA1P01876 353 aa8.01□□□□□ -1.13
RNU4-61P-201ENST00000411243 SPSB2Q99619 263 aa8.01□□□□□ -1.13
RNU4-61P-201ENST00000411243 GTPBP6O43824 516 aaPredicted RBP8□□□□□ -1.13
RNU4-61P-201ENST00000411243 VSIG8P0DPA2 414 aa8□□□□□ -1.13
RNU4-61P-201ENST00000411243 CADPS2Q86UW7 1296 aa8□□□□□ -1.13
RNU4-61P-201ENST00000411243 SCUBE3Q8IX30 993 aa7.99□□□□□ -1.13
RNU4-61P-201ENST00000411243 SPDYE16A6NNV3 312 aaPredicted RBP7.98□□□□□ -1.13
RNU4-61P-201ENST00000411243 GPAT2Q6NUI2 795 aa7.98□□□□□ -1.13
RNU4-61P-201ENST00000411243 DNAJB2P25686 324 aa7.97□□□□□ -1.13
RNU4-61P-201ENST00000411243 MRGPRX2Q96LB1 330 aa7.96□□□□□ -1.14
RNU4-61P-201ENST00000411243 TMEM134Q9H6X4 195 aa7.96□□□□□ -1.14
RNU4-61P-201ENST00000411243 DNMT3AQ9Y6K1 912 aaPredicted RBP7.96□□□□□ -1.14
RNU4-61P-201ENST00000411243 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
RNU4-61P-201ENST00000411243 TRIM46Q7Z4K8 759 aa7.94□□□□□ -1.14
RNU4-61P-201ENST00000411243 OSBPP22059 807 aa7.93□□□□□ -1.14
RNU4-61P-201ENST00000411243 BMP1P13497 986 aa7.92□□□□□ -1.14
RNU4-61P-201ENST00000411243 GRXCR2A6NFK2 248 aa7.91□□□□□ -1.14
RNU4-61P-201ENST00000411243 ZBTB24O43167 697 aaPredicted RBP7.91□□□□□ -1.14
RNU4-61P-201ENST00000411243 SLC10A3P09131 477 aa7.91□□□□□ -1.14
RNU4-61P-201ENST00000411243 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
RNU4-61P-201ENST00000411243 FOXK2Q01167 660 aa7.9□□□□□ -1.14
RNU4-61P-201ENST00000411243 ADAM23O75077 832 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms