RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 KIAA1210Q9ULL0 1709 aa22.07■■□□□ 1.12
LIMS2-208ENST00000410011 VWDEQ8N2E2 1590 aa22.06■■□□□ 1.12
LIMS2-208ENST00000410011 TET3O43151 1660 aa22.06■■□□□ 1.12
LIMS2-208ENST00000410011 PPP2R1AP30153 589 aa22.05■■□□□ 1.12
LIMS2-208ENST00000410011 ZBTB47Q9UFB7 747 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-208ENST00000410011 PIK3C2GO75747 1445 aa22.05■■□□□ 1.12
LIMS2-208ENST00000410011 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
LIMS2-208ENST00000410011 ASXL1Q8IXJ9 1541 aa22.03■■□□□ 1.12
LIMS2-208ENST00000410011 CLTCL1P53675 1640 aa22.03■■□□□ 1.12
LIMS2-208ENST00000410011 EIF3AQ14152 1382 aaKnown RBP22.02■■□□□ 1.12
LIMS2-208ENST00000410011 BACH2Q9BYV9 841 aa22.02■■□□□ 1.12
LIMS2-208ENST00000410011 ZNF521Q96K83 1311 aa22.02■■□□□ 1.12
LIMS2-208ENST00000410011 PDE4AP27815 886 aa22.01■■□□□ 1.11
LIMS2-208ENST00000410011 KANK1Q14678 1352 aa22■■□□□ 1.11
LIMS2-208ENST00000410011 AFAP1Q8N556 730 aa21.98■■□□□ 1.11
LIMS2-208ENST00000410011 INO80Q9ULG1 1556 aaPredicted RBP21.98■■□□□ 1.11
LIMS2-208ENST00000410011 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
LIMS2-208ENST00000410011 DUSP27Q5VZP5 1158 aa21.97■■□□□ 1.11
LIMS2-208ENST00000410011 MYOM2P54296 1465 aa21.97■■□□□ 1.11
LIMS2-208ENST00000410011 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 ABCA9Q8IUA7 1624 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 MYOM1P52179 1685 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 PLEKHH1Q9ULM0 1364 aa21.95■■□□□ 1.1
LIMS2-208ENST00000410011 PLIN1O60240 522 aa21.94■■□□□ 1.1
LIMS2-208ENST00000410011 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
LIMS2-208ENST00000410011 NGEFQ8N5V2 710 aa21.93■■□□□ 1.1
LIMS2-208ENST00000410011 DEKP35659 375 aaKnown RBP21.92■■□□□ 1.1
LIMS2-208ENST00000410011 TRMT2AQ8IZ69 625 aaKnown RBP21.92■■□□□ 1.1
LIMS2-208ENST00000410011 KDM5AP29375 1690 aaKnown RBP21.92■■□□□ 1.1
LIMS2-208ENST00000410011 MAP3K4Q9Y6R4 1608 aa21.91■■□□□ 1.1
LIMS2-208ENST00000410011 KDM2BQ8NHM5 1336 aa21.91■■□□□ 1.1
LIMS2-208ENST00000410011 FANCAO15360 1455 aa21.91■■□□□ 1.1
LIMS2-208ENST00000410011 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
LIMS2-208ENST00000410011 SLFN5Q08AF3 891 aa21.9■■□□□ 1.1
LIMS2-208ENST00000410011 SBNO2Q9Y2G9 1366 aa21.89■■□□□ 1.09
LIMS2-208ENST00000410011 MROH1Q8NDA8 1641 aa21.88■■□□□ 1.09
LIMS2-208ENST00000410011 CENPQQ7L2Z9 268 aaPredicted RBP21.88■■□□□ 1.09
LIMS2-208ENST00000410011 NRXN1Q9ULB1 1477 aa21.88■■□□□ 1.09
LIMS2-208ENST00000410011 ERVK-7P63135 1459 aa21.86■■□□□ 1.09
LIMS2-208ENST00000410011 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
LIMS2-208ENST00000410011 NBR1Q14596 966 aa21.86■■□□□ 1.09
LIMS2-208ENST00000410011 KIF3BO15066 747 aa21.85■■□□□ 1.09
LIMS2-208ENST00000410011 MYO3AQ8NEV4 1616 aa21.85■■□□□ 1.09
LIMS2-208ENST00000410011 C20orf194Q5TEA3 1177 aa21.85■■□□□ 1.09
LIMS2-208ENST00000410011 IFT172Q9UG01 1749 aa21.84■■□□□ 1.09
LIMS2-208ENST00000410011 EFCAB6Q5THR3 1501 aa21.84■■□□□ 1.09
LIMS2-208ENST00000410011 ABCA6Q8N139 1617 aa21.84■■□□□ 1.09
LIMS2-208ENST00000410011 ADGRL1O94910 1474 aa21.83■■□□□ 1.09
LIMS2-208ENST00000410011 KIF1BO60333 1816 aa21.83■■□□□ 1.09
LIMS2-208ENST00000410011 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.08
LIMS2-208ENST00000410011 USP35Q9P2H5 1018 aa21.83■■□□□ 1.08
LIMS2-208ENST00000410011 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
LIMS2-208ENST00000410011 DDRGK1Q96HY6 314 aa21.81■■□□□ 1.08
LIMS2-208ENST00000410011 SETBP1Q9Y6X0 1596 aa21.81■■□□□ 1.08
LIMS2-208ENST00000410011 NKTRP30414 1462 aaKnown RBP21.81■■□□□ 1.08
LIMS2-208ENST00000410011 ADGRF5Q8IZF2 1346 aa21.79■■□□□ 1.08
LIMS2-208ENST00000410011 E9PSI1 815 aa21.79■■□□□ 1.08
LIMS2-208ENST00000410011 POLR3AO14802 1390 aaPredicted RBP21.79■■□□□ 1.08
LIMS2-208ENST00000410011 NPM2Q86SE8 214 aaKnown RBP21.79■■□□□ 1.08
LIMS2-208ENST00000410011 CARD14Q9BXL6 1004 aa21.78■■□□□ 1.08
LIMS2-208ENST00000410011 PPM1GO15355 546 aaPredicted RBP21.76■■□□□ 1.07
LIMS2-208ENST00000410011 APAF1O14727 1248 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 UGGT1Q9NYU2 1555 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 KIDINS220Q9ULH0 1771 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 PPRC1Q5VV67 1664 aaKnown RBP21.74■■□□□ 1.07
LIMS2-208ENST00000410011 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
LIMS2-208ENST00000410011 ZNF518AQ6AHZ1 1483 aa21.72■■□□□ 1.07
LIMS2-208ENST00000410011 FAM161AQ3B820 660 aa21.72■■□□□ 1.07
LIMS2-208ENST00000410011 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
LIMS2-208ENST00000410011 MROH2AA6NES4 1674 aa21.71■■□□□ 1.07
LIMS2-208ENST00000410011 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
LIMS2-208ENST00000410011 CENPJQ9HC77 1338 aaPredicted RBP21.7■■□□□ 1.07
LIMS2-208ENST00000410011 ASXL2Q76L83 1435 aa21.7■■□□□ 1.06
LIMS2-208ENST00000410011 PDE3AQ14432 1141 aa21.7■■□□□ 1.06
LIMS2-208ENST00000410011 PUS7Q96PZ0 661 aaKnown RBP21.69■■□□□ 1.06
LIMS2-208ENST00000410011 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
LIMS2-208ENST00000410011 RPGRIP1LQ68CZ1 1315 aa21.69■■□□□ 1.06
LIMS2-208ENST00000410011 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
LIMS2-208ENST00000410011 NOS1P29475 1434 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 C8orf34Q49A92 452 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 CGNL1Q0VF96 1302 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 SKAP1Q86WV1 359 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 USP32Q8NFA0 1604 aa21.66■■□□□ 1.06
LIMS2-208ENST00000410011 ADGRB1O14514 1584 aa21.66■■□□□ 1.06
LIMS2-208ENST00000410011 ZC3H13Q5T200 1668 aaKnown RBP21.65■■□□□ 1.06
LIMS2-208ENST00000410011 WWC1Q8IX03 1113 aa21.65■■□□□ 1.06
LIMS2-208ENST00000410011 PPLO60437 1756 aa21.65■■□□□ 1.06
LIMS2-208ENST00000410011 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
LIMS2-208ENST00000410011 AAMPQ13685 434 aa21.64■■□□□ 1.06
LIMS2-208ENST00000410011 BCAR3O75815 825 aa21.63■■□□□ 1.05
LIMS2-208ENST00000410011 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-208ENST00000410011 NPATQ14207 1427 aa21.63■■□□□ 1.05
LIMS2-208ENST00000410011 NEFMP07197 916 aa21.63■■□□□ 1.05
LIMS2-208ENST00000410011 CFAP74Q9C0B2 1584 aa21.62■■□□□ 1.05
LIMS2-208ENST00000410011 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
LIMS2-208ENST00000410011 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
LIMS2-208ENST00000410011 MORC1Q86VD1 984 aa21.61■■□□□ 1.05
LIMS2-208ENST00000410011 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms