RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 ZC3H13Q5T200 1668 aaKnown RBP32.19■■■□□ 2.74
PMS1-205ENST00000409985 TMC1Q8TDI8 760 aa32.18■■■□□ 2.74
PMS1-205ENST00000409985 PPP6R1Q9UPN7 881 aa32.18■■■□□ 2.74
PMS1-205ENST00000409985 CAMSAP1Q5T5Y3 1602 aa32.18■■■□□ 2.74
PMS1-205ENST00000409985 MADDQ8WXG6 1647 aa32.18■■■□□ 2.74
PMS1-205ENST00000409985 EFCAB6Q5THR3 1501 aa32.17■■■□□ 2.74
PMS1-205ENST00000409985 FER1L4A9Z1Z3 1794 aa32.16■■■□□ 2.74
PMS1-205ENST00000409985 NUDCQ9Y266 331 aa32.15■■■□□ 2.74
PMS1-205ENST00000409985 NPATQ14207 1427 aa32.15■■■□□ 2.74
PMS1-205ENST00000409985 RNF123Q5XPI4 1314 aa32.15■■■□□ 2.74
PMS1-205ENST00000409985 PARD3Q8TEW0 1356 aa32.14■■■□□ 2.74
PMS1-205ENST00000409985 TRPM2O94759 1503 aa32.14■■■□□ 2.74
PMS1-205ENST00000409985 RBM19Q9Y4C8 960 aaKnown RBP32.13■■■□□ 2.73
PMS1-205ENST00000409985 INSRP06213 1382 aa32.13■■■□□ 2.73
PMS1-205ENST00000409985 PTPRTO14522 1441 aa32.12■■■□□ 2.73
PMS1-205ENST00000409985 NEURL4Q96JN8 1562 aa32.12■■■□□ 2.73
PMS1-205ENST00000409985 RGL3Q3MIN7 710 aa32.12■■■□□ 2.73
PMS1-205ENST00000409985 NBPF1Q3BBV0 1214 aa32.1■■■□□ 2.73
PMS1-205ENST00000409985 CFAP65Q6ZU64 1925 aaKnown RBP32.1■■■□□ 2.73
PMS1-205ENST00000409985 TESK2Q96S53 571 aa32.1■■■□□ 2.73
PMS1-205ENST00000409985 ZMYM3Q14202 1370 aa32.09■■■□□ 2.73
PMS1-205ENST00000409985 ARHGAP31Q2M1Z3 1444 aa32.08■■■□□ 2.73
PMS1-205ENST00000409985 RIMS1Q86UR5 1692 aaKnown RBP32.07■■■□□ 2.72
PMS1-205ENST00000409985 PER1O15534 1290 aaPredicted RBP32.07■■■□□ 2.72
PMS1-205ENST00000409985 NLRP13Q86W25 1043 aa32.07■■■□□ 2.72
PMS1-205ENST00000409985 IRX6P78412 446 aaPredicted RBP32.06■■■□□ 2.72
PMS1-205ENST00000409985 SPHKAPQ2M3C7 1700 aa32.06■■■□□ 2.72
PMS1-205ENST00000409985 CEBPAP49715 358 aaPredicted RBP32.06■■■□□ 2.72
PMS1-205ENST00000409985 FBXO31Q5XUX0 539 aaPredicted RBP32.06■■■□□ 2.72
PMS1-205ENST00000409985 MROH2AA6NES4 1674 aa32.05■■■□□ 2.72
PMS1-205ENST00000409985 KDM4FA0A1W2PPD8 638 aa32.05■■■□□ 2.72
PMS1-205ENST00000409985 ESF1Q9H501 851 aaKnown RBP32.03■■■□□ 2.72
PMS1-205ENST00000409985 C3P01024 1663 aa32.03■■■□□ 2.72
PMS1-205ENST00000409985 TMF1P82094 1093 aa32.02■■■□□ 2.72
PMS1-205ENST00000409985 IQGAP1P46940 1657 aa32■■■□□ 2.71
PMS1-205ENST00000409985 DISP3Q9P2K9 1392 aa31.98■■■□□ 2.71
PMS1-205ENST00000409985 NOS1P29475 1434 aa31.98■■■□□ 2.71
PMS1-205ENST00000409985 PREX1Q8TCU6 1659 aa31.98■■■□□ 2.71
PMS1-205ENST00000409985 KIAA1210Q9ULL0 1709 aa31.97■■■□□ 2.71
PMS1-205ENST00000409985 SYNMO15061 1565 aa31.96■■■□□ 2.71
PMS1-205ENST00000409985 UGGT1Q9NYU2 1555 aa31.96■■■□□ 2.71
PMS1-205ENST00000409985 ERVK-7P63135 1459 aa31.95■■■□□ 2.71
PMS1-205ENST00000409985 PLPPR3Q6T4P5 718 aa31.95■■■□□ 2.7
PMS1-205ENST00000409985 PDE3BQ13370 1112 aa31.93■■■□□ 2.7
PMS1-205ENST00000409985 CLTCL1P53675 1640 aa31.93■■■□□ 2.7
PMS1-205ENST00000409985 PTPRMP28827 1452 aa31.93■■■□□ 2.7
PMS1-205ENST00000409985 SPATA31D1Q6ZQQ2 1576 aa31.93■■■□□ 2.7
PMS1-205ENST00000409985 FANCIQ9NVI1 1328 aa31.9■■■□□ 2.7
PMS1-205ENST00000409985 SCAF11Q99590 1463 aaKnown RBP31.89■■■□□ 2.7
PMS1-205ENST00000409985 ANP32EQ9BTT0 268 aa31.89■■■□□ 2.7
PMS1-205ENST00000409985 CDCA8Q53HL2 280 aa31.89■■■□□ 2.69
PMS1-205ENST00000409985 CNGB1Q14028 1251 aaPredicted RBP31.88■■■□□ 2.69
PMS1-205ENST00000409985 SLC24A1O60721 1099 aa31.86■■■□□ 2.69
PMS1-205ENST00000409985 PANK3Q9H999 370 aa31.84■■■□□ 2.69
PMS1-205ENST00000409985 PIK3C2BO00750 1634 aa31.84■■■□□ 2.69
PMS1-205ENST00000409985 MYOM2P54296 1465 aa31.82■■■□□ 2.68
PMS1-205ENST00000409985 BLMP54132 1417 aaPredicted RBP31.82■■■□□ 2.68
PMS1-205ENST00000409985 IDI1Q13907 227 aa31.8■■■□□ 2.68
PMS1-205ENST00000409985 EIF3AQ14152 1382 aaKnown RBP31.8■■■□□ 2.68
PMS1-205ENST00000409985 TNRQ92752 1358 aa31.8■■■□□ 2.68
PMS1-205ENST00000409985 B4GALNT3Q6L9W6 998 aa31.8■■■□□ 2.68
PMS1-205ENST00000409985 NPC1L1Q9UHC9 1359 aa31.76■■■□□ 2.67
PMS1-205ENST00000409985 KIF1BO60333 1816 aa31.73■■■□□ 2.67
PMS1-205ENST00000409985 SLC52A1Q9NWF4 448 aa31.72■■■□□ 2.67
PMS1-205ENST00000409985 IFT172Q9UG01 1749 aa31.71■■■□□ 2.67
PMS1-205ENST00000409985 MYO3AQ8NEV4 1616 aa31.7■■■□□ 2.66
PMS1-205ENST00000409985 NRXN1Q9ULB1 1477 aa31.68■■■□□ 2.66
PMS1-205ENST00000409985 CC2D1BQ5T0F9 858 aaKnown RBP31.68■■■□□ 2.66
PMS1-205ENST00000409985 MYO5BQ9ULV0 1848 aa31.68■■■□□ 2.66
PMS1-205ENST00000409985 TMEM131LA2VDJ0 1609 aa31.67■■■□□ 2.66
PMS1-205ENST00000409985 SETD1BQ9UPS6 1966 aaKnown RBP31.67■■■□□ 2.66
PMS1-205ENST00000409985 KNSTRNQ9Y448 316 aa31.67■■■□□ 2.66
PMS1-205ENST00000409985 ADGRB3O60242 1522 aa31.66■■■□□ 2.66
PMS1-205ENST00000409985 CCDC136Q96JN2 1154 aa31.66■■■□□ 2.66
PMS1-205ENST00000409985 ASXL1Q8IXJ9 1541 aa31.66■■■□□ 2.66
PMS1-205ENST00000409985 RRP1P56182 461 aaKnown RBP31.65■■■□□ 2.66
PMS1-205ENST00000409985 RCAN3Q9UKA8 241 aa31.65■■■□□ 2.66
PMS1-205ENST00000409985 NLRP1Q9C000 1473 aa31.65■■■□□ 2.66
PMS1-205ENST00000409985 KDM5AP29375 1690 aaKnown RBP31.65■■■□□ 2.66
PMS1-205ENST00000409985 MYOM1P52179 1685 aa31.64■■■□□ 2.66
PMS1-205ENST00000409985 AMER1Q5JTC6 1135 aaPredicted RBP31.63■■■□□ 2.65
PMS1-205ENST00000409985 CHGAP10645 457 aaKnown RBP31.62■■■□□ 2.65
PMS1-205ENST00000409985 PIK3C2GO75747 1445 aa31.62■■■□□ 2.65
PMS1-205ENST00000409985 SBNO2Q9Y2G9 1366 aa31.62■■■□□ 2.65
PMS1-205ENST00000409985 UBR1Q8IWV7 1749 aa31.61■■■□□ 2.65
PMS1-205ENST00000409985 A2ML1A8K2U0 1454 aa31.61■■■□□ 2.65
PMS1-205ENST00000409985 SETBP1Q9Y6X0 1596 aa31.6■■■□□ 2.65
PMS1-205ENST00000409985 CEP170BQ9Y4F5 1589 aaPredicted RBP31.59■■■□□ 2.65
PMS1-205ENST00000409985 PPP2R1AP30153 589 aa31.57■■■□□ 2.64
PMS1-205ENST00000409985 ZNF142P52746 1687 aaPredicted RBP31.56■■■□□ 2.64
PMS1-205ENST00000409985 MSH5O43196 834 aa31.5■■■□□ 2.63
PMS1-205ENST00000409985 STAG3Q9UJ98 1225 aa31.5■■■□□ 2.63
PMS1-205ENST00000409985 NEXMIFQ5QGS0 1516 aa31.5■■■□□ 2.63
PMS1-205ENST00000409985 RPGRIP1LQ68CZ1 1315 aa31.48■■■□□ 2.63
PMS1-205ENST00000409985 ADGRF5Q8IZF2 1346 aa31.48■■■□□ 2.63
PMS1-205ENST00000409985 NUTM2DQ5VT03 806 aaPredicted RBP31.48■■■□□ 2.63
PMS1-205ENST00000409985 CFAP70Q5T0N1 1121 aa31.47■■■□□ 2.63
PMS1-205ENST00000409985 PPLO60437 1756 aa31.47■■■□□ 2.63
PMS1-205ENST00000409985 ADAMTS8Q9UP79 889 aa31.46■■■□□ 2.63
PMS1-205ENST00000409985 ZFYVE9O95405 1425 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms