RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 MROH1Q8NDA8 1641 aa10.42□□□□□ -0.74
EPHA4-203ENST00000409938 TMF1P82094 1093 aa10.42□□□□□ -0.74
EPHA4-203ENST00000409938 ASXL1Q8IXJ9 1541 aa10.41□□□□□ -0.74
EPHA4-203ENST00000409938 ABCA9Q8IUA7 1624 aa10.41□□□□□ -0.74
EPHA4-203ENST00000409938 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
EPHA4-203ENST00000409938 KDM2BQ8NHM5 1336 aa10.41□□□□□ -0.74
EPHA4-203ENST00000409938 RGL3Q3MIN7 710 aa10.4□□□□□ -0.74
EPHA4-203ENST00000409938 AMER1Q5JTC6 1135 aaPredicted RBP10.4□□□□□ -0.74
EPHA4-203ENST00000409938 STAC3Q96MF2 364 aa10.4□□□□□ -0.74
EPHA4-203ENST00000409938 PLEKHH1Q9ULM0 1364 aa10.4□□□□□ -0.75
EPHA4-203ENST00000409938 PDE4AP27815 886 aa10.4□□□□□ -0.75
EPHA4-203ENST00000409938 MAP3K4Q9Y6R4 1608 aa10.39□□□□□ -0.75
EPHA4-203ENST00000409938 MYOM2P54296 1465 aa10.39□□□□□ -0.75
EPHA4-203ENST00000409938 ABCA6Q8N139 1617 aa10.39□□□□□ -0.75
EPHA4-203ENST00000409938 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
EPHA4-203ENST00000409938 TRMT2AQ8IZ69 625 aaKnown RBP10.38□□□□□ -0.75
EPHA4-203ENST00000409938 NRXN1Q9ULB1 1477 aa10.38□□□□□ -0.75
EPHA4-203ENST00000409938 VIRMAQ69YN4 1812 aaKnown RBP10.38□□□□□ -0.75
EPHA4-203ENST00000409938 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
EPHA4-203ENST00000409938 PPP2R1AP30153 589 aa10.37□□□□□ -0.75
EPHA4-203ENST00000409938 ZC3H13Q5T200 1668 aaKnown RBP10.37□□□□□ -0.75
EPHA4-203ENST00000409938 DUSP27Q5VZP5 1158 aa10.37□□□□□ -0.75
EPHA4-203ENST00000409938 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
EPHA4-203ENST00000409938 CRBNQ96SW2 442 aa10.36□□□□□ -0.75
EPHA4-203ENST00000409938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.36□□□□□ -0.75
EPHA4-203ENST00000409938 ATP7AQ04656 1500 aa10.36□□□□□ -0.75
EPHA4-203ENST00000409938 MROH2AA6NES4 1674 aa10.36□□□□□ -0.75
EPHA4-203ENST00000409938 ERVK-7P63135 1459 aa10.35□□□□□ -0.75
EPHA4-203ENST00000409938 PLIN1O60240 522 aa10.35□□□□□ -0.75
EPHA4-203ENST00000409938 SHPRHQ149N8 1683 aa10.35□□□□□ -0.75
EPHA4-203ENST00000409938 KIF1BO60333 1816 aa10.35□□□□□ -0.75
EPHA4-203ENST00000409938 EFCAB2Q5VUJ9 269 aa10.34□□□□□ -0.75
EPHA4-203ENST00000409938 C20orf194Q5TEA3 1177 aa10.34□□□□□ -0.75
EPHA4-203ENST00000409938 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
EPHA4-203ENST00000409938 EFCAB6Q5THR3 1501 aa10.34□□□□□ -0.75
EPHA4-203ENST00000409938 LMTK2Q8IWU2 1503 aa10.34□□□□□ -0.75
EPHA4-203ENST00000409938 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
EPHA4-203ENST00000409938 NBR1Q14596 966 aa10.34□□□□□ -0.75
EPHA4-203ENST00000409938 USP32Q8NFA0 1604 aa10.33□□□□□ -0.76
EPHA4-203ENST00000409938 PPRC1Q5VV67 1664 aaKnown RBP10.32□□□□□ -0.76
EPHA4-203ENST00000409938 USP35Q9P2H5 1018 aa10.32□□□□□ -0.76
EPHA4-203ENST00000409938 SLFN5Q08AF3 891 aa10.32□□□□□ -0.76
EPHA4-203ENST00000409938 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
EPHA4-203ENST00000409938 SBNO2Q9Y2G9 1366 aa10.32□□□□□ -0.76
EPHA4-203ENST00000409938 EIF3AQ14152 1382 aaKnown RBP10.31□□□□□ -0.76
EPHA4-203ENST00000409938 ADGRB3O60242 1522 aa10.31□□□□□ -0.76
EPHA4-203ENST00000409938 KIDINS220Q9ULH0 1771 aa10.31□□□□□ -0.76
EPHA4-203ENST00000409938 CENPQQ7L2Z9 268 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-203ENST00000409938 KNSTRNQ9Y448 316 aa10.31□□□□□ -0.76
EPHA4-203ENST00000409938 NKTRP30414 1462 aaKnown RBP10.3□□□□□ -0.76
EPHA4-203ENST00000409938 PPLO60437 1756 aa10.3□□□□□ -0.76
EPHA4-203ENST00000409938 UGGT1Q9NYU2 1555 aa10.3□□□□□ -0.76
EPHA4-203ENST00000409938 SPAG9O60271 1321 aaKnown RBP10.3□□□□□ -0.76
EPHA4-203ENST00000409938 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
EPHA4-203ENST00000409938 IQSEC2Q5JU85 1478 aa10.28□□□□□ -0.76
EPHA4-203ENST00000409938 SKAP1Q86WV1 359 aa10.28□□□□□ -0.76
EPHA4-203ENST00000409938 FANCAO15360 1455 aa10.28□□□□□ -0.76
EPHA4-203ENST00000409938 C8orf34Q49A92 452 aa10.28□□□□□ -0.76
EPHA4-203ENST00000409938 ADGRB1O14514 1584 aa10.28□□□□□ -0.76
EPHA4-203ENST00000409938 QRICH2Q9H0J4 1663 aa10.27□□□□□ -0.77
EPHA4-203ENST00000409938 POLR3AO14802 1390 aaPredicted RBP10.27□□□□□ -0.77
EPHA4-203ENST00000409938 WDR43Q15061 677 aaKnown RBP eCLIP10.27□□□□□ -0.77
EPHA4-203ENST00000409938 NGEFQ8N5V2 710 aa10.27□□□□□ -0.77
EPHA4-203ENST00000409938 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.77
EPHA4-203ENST00000409938 AFAP1Q8N556 730 aa10.26□□□□□ -0.77
EPHA4-203ENST00000409938 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
EPHA4-203ENST00000409938 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
EPHA4-203ENST00000409938 DDRGK1Q96HY6 314 aa10.26□□□□□ -0.77
EPHA4-203ENST00000409938 KANK1Q14678 1352 aa10.25□□□□□ -0.77
EPHA4-203ENST00000409938 PPM1GO15355 546 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-203ENST00000409938 RTL5Q5HYW3 569 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-203ENST00000409938 NPM2Q86SE8 214 aaKnown RBP10.25□□□□□ -0.77
EPHA4-203ENST00000409938 NINLQ9Y2I6 1382 aa10.25□□□□□ -0.77
EPHA4-203ENST00000409938 FRMPD1Q5SYB0 1578 aa10.24□□□□□ -0.77
EPHA4-203ENST00000409938 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
EPHA4-203ENST00000409938 ADGRL1O94910 1474 aa10.24□□□□□ -0.77
EPHA4-203ENST00000409938 ADGRF5Q8IZF2 1346 aa10.24□□□□□ -0.77
EPHA4-203ENST00000409938 ZNF518AQ6AHZ1 1483 aa10.23□□□□□ -0.77
EPHA4-203ENST00000409938 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.23□□□□□ -0.77
EPHA4-203ENST00000409938 PHF23Q9BUL5 403 aaPredicted RBP10.23□□□□□ -0.77
EPHA4-203ENST00000409938 PIK3C2BO00750 1634 aa10.23□□□□□ -0.77
EPHA4-203ENST00000409938 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
EPHA4-203ENST00000409938 E9PSI1 815 aa10.23□□□□□ -0.77
EPHA4-203ENST00000409938 DMRT2Q9Y5R5 561 aa10.23□□□□□ -0.77
EPHA4-203ENST00000409938 ADGRB2O60241 1585 aa10.22□□□□□ -0.77
EPHA4-203ENST00000409938 NLRP1Q9C000 1473 aa10.22□□□□□ -0.77
EPHA4-203ENST00000409938 ARHGEF28Q8N1W1 1705 aaKnown RBP10.22□□□□□ -0.77
EPHA4-203ENST00000409938 NEFMP07197 916 aa10.22□□□□□ -0.77
EPHA4-203ENST00000409938 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
EPHA4-203ENST00000409938 APAF1O14727 1248 aa10.21□□□□□ -0.77
EPHA4-203ENST00000409938 ZMYM3Q14202 1370 aa10.21□□□□□ -0.78
EPHA4-203ENST00000409938 PDE3AQ14432 1141 aa10.21□□□□□ -0.78
EPHA4-203ENST00000409938 LAS1LQ9Y4W2 734 aaKnown RBP10.21□□□□□ -0.78
EPHA4-203ENST00000409938 SIGLEC1Q9BZZ2 1709 aa10.2□□□□□ -0.78
EPHA4-203ENST00000409938 USP19O94966 1318 aa10.2□□□□□ -0.78
EPHA4-203ENST00000409938 NCBP3Q53F19 620 aaKnown RBP10.2□□□□□ -0.78
EPHA4-203ENST00000409938 CCDC146Q8IYE0 955 aa10.2□□□□□ -0.78
EPHA4-203ENST00000409938 CFAP74Q9C0B2 1584 aa10.2□□□□□ -0.78
EPHA4-203ENST00000409938 BCAR3O75815 825 aa10.2□□□□□ -0.78
EPHA4-203ENST00000409938 CAMSAP1Q5T5Y3 1602 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms