RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 LRRC7Q96NW7 1537 aa7.34□□□□□ -1.23
R3HDM1-203ENST00000409606 MON2Q7Z3U7 1717 aa7.34□□□□□ -1.23
R3HDM1-203ENST00000409606 MPHOSPH9Q99550 1183 aa7.34□□□□□ -1.23
R3HDM1-203ENST00000409606 NALCNQ8IZF0 1738 aa7.34□□□□□ -1.23
R3HDM1-203ENST00000409606 DISP3Q9P2K9 1392 aa7.33□□□□□ -1.24
R3HDM1-203ENST00000409606 STAC3Q96MF2 364 aa7.33□□□□□ -1.24
R3HDM1-203ENST00000409606 FMN2Q9NZ56 1722 aa7.33□□□□□ -1.24
R3HDM1-203ENST00000409606 PHRF1Q9P1Y6 1649 aaKnown RBP7.32□□□□□ -1.24
R3HDM1-203ENST00000409606 ITSN1Q15811 1721 aa7.32□□□□□ -1.24
R3HDM1-203ENST00000409606 SLC24A1O60721 1099 aa7.31□□□□□ -1.24
R3HDM1-203ENST00000409606 KCNH8Q96L42 1107 aa7.31□□□□□ -1.24
R3HDM1-203ENST00000409606 TSPY4P0CV99 314 aa7.31□□□□□ -1.24
R3HDM1-203ENST00000409606 TSPY10P0CW01 314 aa7.31□□□□□ -1.24
R3HDM1-203ENST00000409606 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.31□□□□□ -1.24
R3HDM1-203ENST00000409606 RAPGEF3O95398 923 aa7.31□□□□□ -1.24
R3HDM1-203ENST00000409606 SBNO2Q9Y2G9 1366 aa7.31□□□□□ -1.24
R3HDM1-203ENST00000409606 PCGF6Q9BYE7 350 aa7.3□□□□□ -1.24
R3HDM1-203ENST00000409606 PPARGC1BQ86YN6 1023 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-203ENST00000409606 ARID3CA6NKF2 412 aa7.29□□□□□ -1.24
R3HDM1-203ENST00000409606 FAM50AQ14320 339 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-203ENST00000409606 KANK1Q14678 1352 aa7.29□□□□□ -1.24
R3HDM1-203ENST00000409606 CFAP65Q6ZU64 1925 aaKnown RBP7.28□□□□□ -1.24
R3HDM1-203ENST00000409606 ZMYM3Q14202 1370 aa7.28□□□□□ -1.24
R3HDM1-203ENST00000409606 RRP7BPQ9NSQ0 103 aa7.28□□□□□ -1.24
R3HDM1-203ENST00000409606 RPGRIP1LQ68CZ1 1315 aa7.27□□□□□ -1.24
R3HDM1-203ENST00000409606 ADAMTS13Q76LX8 1427 aa7.27□□□□□ -1.25
R3HDM1-203ENST00000409606 TRPM3Q9HCF6 1732 aaPredicted RBP7.27□□□□□ -1.25
R3HDM1-203ENST00000409606 CDC42BPGQ6DT37 1551 aa7.27□□□□□ -1.25
R3HDM1-203ENST00000409606 KIF20BQ96Q89 1820 aa7.27□□□□□ -1.25
R3HDM1-203ENST00000409606 MST1RQ04912 1400 aa7.27□□□□□ -1.25
R3HDM1-203ENST00000409606 CCDC144AA2RUR9 1427 aa7.26□□□□□ -1.25
R3HDM1-203ENST00000409606 PTCH1Q13635 1447 aa7.26□□□□□ -1.25
R3HDM1-203ENST00000409606 TULP4Q9NRJ4 1543 aa7.26□□□□□ -1.25
R3HDM1-203ENST00000409606 SHPRHQ149N8 1683 aa7.25□□□□□ -1.25
R3HDM1-203ENST00000409606 ZEB1P37275 1124 aaPredicted RBP7.25□□□□□ -1.25
R3HDM1-203ENST00000409606 ATP1B4Q9UN42 357 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-203ENST00000409606 CAMTA1Q9Y6Y1 1673 aa7.24□□□□□ -1.25
R3HDM1-203ENST00000409606 ABCA3Q99758 1704 aa7.24□□□□□ -1.25
R3HDM1-203ENST00000409606 PLEKHG1Q9ULL1 1385 aa7.24□□□□□ -1.25
R3HDM1-203ENST00000409606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-203ENST00000409606 HNRNPUL2Q1KMD3 747 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-203ENST00000409606 PPP1R15AO75807 674 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-203ENST00000409606 FAM135BQ49AJ0 1406 aa7.23□□□□□ -1.25
R3HDM1-203ENST00000409606 PIK3R4Q99570 1358 aa7.23□□□□□ -1.25
R3HDM1-203ENST00000409606 NHSL1Q5SYE7 1610 aa7.23□□□□□ -1.25
R3HDM1-203ENST00000409606 KIF1AQ12756 1690 aa7.23□□□□□ -1.25
R3HDM1-203ENST00000409606 SCAF11Q99590 1463 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-203ENST00000409606 ALS2Q96Q42 1657 aa7.22□□□□□ -1.25
R3HDM1-203ENST00000409606 NKTRP30414 1462 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-203ENST00000409606 SLC52A1Q9NWF4 448 aa7.22□□□□□ -1.25
R3HDM1-203ENST00000409606 TNRQ92752 1358 aa7.21□□□□□ -1.25
R3HDM1-203ENST00000409606 RGPD8O14715 1765 aaPredicted RBP7.21□□□□□ -1.25
R3HDM1-203ENST00000409606 NCOA3Q9Y6Q9 1424 aa7.21□□□□□ -1.26
R3HDM1-203ENST00000409606 LTBP4Q8N2S1 1624 aa7.21□□□□□ -1.26
R3HDM1-203ENST00000409606 TMEM2Q9UHN6 1383 aa7.21□□□□□ -1.26
R3HDM1-203ENST00000409606 PKD2Q13563 968 aa7.21□□□□□ -1.26
R3HDM1-203ENST00000409606 CHIC2Q9UKJ5 165 aa7.21□□□□□ -1.26
R3HDM1-203ENST00000409606 ZNF777Q9ULD5 760 aaPredicted RBP7.21□□□□□ -1.26
R3HDM1-203ENST00000409606 COL22A1Q8NFW1 1626 aaPredicted RBP7.21□□□□□ -1.26
R3HDM1-203ENST00000409606 SIRT1Q96EB6 747 aa7.2□□□□□ -1.26
R3HDM1-203ENST00000409606 RGPD1P0DJD0 1748 aa7.2□□□□□ -1.26
R3HDM1-203ENST00000409606 ARID4BQ4LE39 1312 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-203ENST00000409606 TTBK1Q5TCY1 1321 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-203ENST00000409606 CD163L1Q9NR16 1453 aa7.19□□□□□ -1.26
R3HDM1-203ENST00000409606 MED1Q15648 1581 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-203ENST00000409606 LMO7Q8WWI1 1683 aa7.19□□□□□ -1.26
R3HDM1-203ENST00000409606 PTPRUQ92729 1446 aa7.18□□□□□ -1.26
R3HDM1-203ENST00000409606 RIMS2Q9UQ26 1411 aa7.18□□□□□ -1.26
R3HDM1-203ENST00000409606 KIF3BO15066 747 aa7.18□□□□□ -1.26
R3HDM1-203ENST00000409606 PUS7Q96PZ0 661 aaKnown RBP7.18□□□□□ -1.26
R3HDM1-203ENST00000409606 PIK3C2AO00443 1686 aa7.18□□□□□ -1.26
R3HDM1-203ENST00000409606 WNK3Q9BYP7 1800 aa7.17□□□□□ -1.26
R3HDM1-203ENST00000409606 NBPF8Q3BBV2 869 aa7.17□□□□□ -1.26
R3HDM1-203ENST00000409606 ABCC6O95255 1503 aa7.17□□□□□ -1.26
R3HDM1-203ENST00000409606 SLC4A1APQ9BWU0 796 aaKnown RBP7.16□□□□□ -1.26
R3HDM1-203ENST00000409606 ILDR2Q71H61 639 aa7.16□□□□□ -1.26
R3HDM1-203ENST00000409606 ABCC11Q96J66 1382 aa7.16□□□□□ -1.26
R3HDM1-203ENST00000409606 C14orf93Q9H972 538 aaKnown RBP7.15□□□□□ -1.26
R3HDM1-203ENST00000409606 DCCP43146 1447 aa7.15□□□□□ -1.27
R3HDM1-203ENST00000409606 LRPPRCP42704 1394 aaKnown RBP7.15□□□□□ -1.27
R3HDM1-203ENST00000409606 L3MBTL2Q969R5 705 aa7.14□□□□□ -1.27
R3HDM1-203ENST00000409606 SSH2Q76I76 1423 aa7.14□□□□□ -1.27
R3HDM1-203ENST00000409606 YTHDC2Q9H6S0 1430 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-203ENST00000409606 COL18A1P39060 1754 aa7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 ADAMTS7Q9UKP4 1686 aa7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 NPC1L1Q9UHC9 1359 aa7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 TESK2Q96S53 571 aa7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 SIN3AQ96ST3 1273 aa7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 ATP7BP35670 1465 aa7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 SMG6Q86US8 1419 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 IDI1Q13907 227 aa7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 FAM208AQ9UK61 1670 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-203ENST00000409606 WASHC2CQ9Y4E1 1318 aa7.12□□□□□ -1.27
R3HDM1-203ENST00000409606 PLCH1Q4KWH8 1693 aa7.12□□□□□ -1.27
R3HDM1-203ENST00000409606 INSRP06213 1382 aa7.12□□□□□ -1.27
R3HDM1-203ENST00000409606 AHDC1Q5TGY3 1603 aaPredicted RBP7.11□□□□□ -1.27
R3HDM1-203ENST00000409606 ANKARQ7Z5J8 1434 aa7.11□□□□□ -1.27
R3HDM1-203ENST00000409606 SLIT3O75094 1523 aa7.1□□□□□ -1.27
R3HDM1-203ENST00000409606 CPSF1Q10570 1443 aaKnown RBP7.1□□□□□ -1.27
R3HDM1-203ENST00000409606 VIRMAQ69YN4 1812 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms