RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NUTM2BA6NNL0 878 aaPredicted RBP14.86□□□□□ -0.03
SNX13-202ENST00000409604 NUTM2EB1AL46 878 aaPredicted RBP14.86□□□□□ -0.03
SNX13-202ENST00000409604 APAF1O14727 1248 aa14.86□□□□□ -0.03
SNX13-202ENST00000409604 NUTM2AQ8IVF1 878 aaPredicted RBP14.86□□□□□ -0.03
SNX13-202ENST00000409604 FTSJ3Q8IY81 847 aaKnown RBP14.86□□□□□ -0.03
SNX13-202ENST00000409604 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.86□□□□□ -0.03
SNX13-202ENST00000409604 CGNL1Q0VF96 1302 aa14.86□□□□□ -0.03
SNX13-202ENST00000409604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.86□□□□□ -0.03
SNX13-202ENST00000409604 POGZQ7Z3K3 1410 aa14.86□□□□□ -0.03
SNX13-202ENST00000409604 FOXO3O43524 673 aa14.85□□□□□ -0.03
SNX13-202ENST00000409604 AMOTL2Q9Y2J4 779 aa14.85□□□□□ -0.03
SNX13-202ENST00000409604 MAP3K1Q13233 1512 aa14.85□□□□□ -0.03
SNX13-202ENST00000409604 NECTIN2Q92692 538 aa14.85□□□□□ -0.03
SNX13-202ENST00000409604 APBB1O00213 710 aa14.84□□□□□ -0.03
SNX13-202ENST00000409604 EVA1CP58658 441 aa14.84□□□□□ -0.03
SNX13-202ENST00000409604 MTHFSP49914 203 aa14.84□□□□□ -0.03
SNX13-202ENST00000409604 CCER2I3L3R5 266 aa14.83□□□□□ -0.04
SNX13-202ENST00000409604 ZNF428Q96B54 188 aa14.83□□□□□ -0.04
SNX13-202ENST00000409604 A2MP01023 1474 aa14.82□□□□□ -0.04
SNX13-202ENST00000409604 ZC3H6P61129 1189 aaKnown RBP14.82□□□□□ -0.04
SNX13-202ENST00000409604 RRS1Q15050 365 aaKnown RBP14.82□□□□□ -0.04
SNX13-202ENST00000409604 SYTL4Q96C24 671 aaPredicted RBP14.82□□□□□ -0.04
SNX13-202ENST00000409604 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
SNX13-202ENST00000409604 NOS1P29475 1434 aa14.82□□□□□ -0.04
SNX13-202ENST00000409604 NPHP1O15259 732 aa14.81□□□□□ -0.04
SNX13-202ENST00000409604 RGS3P49796 1198 aa14.81□□□□□ -0.04
SNX13-202ENST00000409604 STRN4Q9NRL3 753 aa14.81□□□□□ -0.04
SNX13-202ENST00000409604 NCKAP5LQ9HCH0 1330 aa14.8□□□□□ -0.04
SNX13-202ENST00000409604 PLIN1O60240 522 aa14.8□□□□□ -0.04
SNX13-202ENST00000409604 NGEFQ8N5V2 710 aa14.8□□□□□ -0.04
SNX13-202ENST00000409604 NLRP2Q9NX02 1062 aa14.8□□□□□ -0.04
SNX13-202ENST00000409604 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
SNX13-202ENST00000409604 MYBBP1AQ9BQG0 1328 aaKnown RBP14.79□□□□□ -0.04
SNX13-202ENST00000409604 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
SNX13-202ENST00000409604 TSPOAP1O95153 1857 aa14.78□□□□□ -0.04
SNX13-202ENST00000409604 ZNF518AQ6AHZ1 1483 aa14.78□□□□□ -0.04
SNX13-202ENST00000409604 NUDT16Q96DE0 195 aaKnown RBP14.77□□□□□ -0.04
SNX13-202ENST00000409604 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.05
SNX13-202ENST00000409604 SAMD9Q5K651 1589 aa14.76□□□□□ -0.05
SNX13-202ENST00000409604 DIAPH1O60610 1272 aaKnown RBP14.75□□□□□ -0.05
SNX13-202ENST00000409604 ZMYM3Q14202 1370 aa14.75□□□□□ -0.05
SNX13-202ENST00000409604 SLC4A10Q6U841 1118 aa14.74□□□□□ -0.05
SNX13-202ENST00000409604 TNRQ92752 1358 aa14.73□□□□□ -0.05
SNX13-202ENST00000409604 RTEL1-TNFRSF6BF6WH68 1400 aa14.73□□□□□ -0.05
SNX13-202ENST00000409604 NME9Q86XW9 330 aa14.73□□□□□ -0.05
SNX13-202ENST00000409604 MEX3CQ5U5Q3 659 aaKnown RBP14.72□□□□□ -0.05
SNX13-202ENST00000409604 EIF2S2P20042 333 aaKnown RBP14.72□□□□□ -0.05
SNX13-202ENST00000409604 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
SNX13-202ENST00000409604 MYH16Q9H6N6 1097 aa14.72□□□□□ -0.05
SNX13-202ENST00000409604 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
SNX13-202ENST00000409604 CDCA7LQ96GN5 454 aa14.72□□□□□ -0.05
SNX13-202ENST00000409604 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
SNX13-202ENST00000409604 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
SNX13-202ENST00000409604 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.05
SNX13-202ENST00000409604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNX13-202ENST00000409604 RIPK4P57078 832 aa14.71□□□□□ -0.05
SNX13-202ENST00000409604 ADAMTS2O95450 1211 aa14.71□□□□□ -0.06
SNX13-202ENST00000409604 STAC3Q96MF2 364 aa14.7□□□□□ -0.06
SNX13-202ENST00000409604 PPP2R1AP30153 589 aa14.7□□□□□ -0.06
SNX13-202ENST00000409604 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
SNX13-202ENST00000409604 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
SNX13-202ENST00000409604 ABCC10Q5T3U5 1492 aa14.7□□□□□ -0.06
SNX13-202ENST00000409604 ZRANB1Q9UGI0 708 aa14.68□□□□□ -0.06
SNX13-202ENST00000409604 RPGRIP1LQ68CZ1 1315 aa14.68□□□□□ -0.06
SNX13-202ENST00000409604 KCNA6P17658 529 aa14.68□□□□□ -0.06
SNX13-202ENST00000409604 USHBP1Q8N6Y0 703 aa14.68□□□□□ -0.06
SNX13-202ENST00000409604 C14orf93Q9H972 538 aaKnown RBP14.68□□□□□ -0.06
SNX13-202ENST00000409604 SULT6B1Q6IMI4 303 aa14.67□□□□□ -0.06
SNX13-202ENST00000409604 ITPRIPQ8IWB1 547 aa14.67□□□□□ -0.06
SNX13-202ENST00000409604 GPRASP1Q5JY77 1395 aa14.67□□□□□ -0.06
SNX13-202ENST00000409604 PRKAR2BP31323 418 aa14.66□□□□□ -0.06
SNX13-202ENST00000409604 TEFQ10587 303 aa14.66□□□□□ -0.06
SNX13-202ENST00000409604 TAOK2Q9UL54 1235 aa14.66□□□□□ -0.06
SNX13-202ENST00000409604 ABCA8O94911 1581 aa14.66□□□□□ -0.06
SNX13-202ENST00000409604 RPRD2Q5VT52 1461 aaKnown RBP14.66□□□□□ -0.06
SNX13-202ENST00000409604 CABLES1Q8TDN4 633 aa14.66□□□□□ -0.06
SNX13-202ENST00000409604 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
SNX13-202ENST00000409604 OS9Q13438 667 aaPredicted RBP14.65□□□□□ -0.06
SNX13-202ENST00000409604 PRDM11Q9NQV5 511 aa14.65□□□□□ -0.06
SNX13-202ENST00000409604 EMILIN1Q9Y6C2 1016 aa14.65□□□□□ -0.06
SNX13-202ENST00000409604 DDX17Q92841 729 aaKnown RBP14.65□□□□□ -0.06
SNX13-202ENST00000409604 MAPKBP1O60336 1514 aa14.65□□□□□ -0.06
SNX13-202ENST00000409604 FAM135AQ9P2D6 1515 aa14.65□□□□□ -0.06
SNX13-202ENST00000409604 THUMPD2Q9BTF0 503 aaKnown RBP14.64□□□□□ -0.07
SNX13-202ENST00000409604 CHRNA2Q15822 529 aa14.64□□□□□ -0.07
SNX13-202ENST00000409604 C1orf141Q5JVX7 400 aa14.64□□□□□ -0.07
SNX13-202ENST00000409604 TCP11L2Q8N4U5 519 aa14.64□□□□□ -0.07
SNX13-202ENST00000409604 WASLO00401 505 aaPredicted RBP14.64□□□□□ -0.07
SNX13-202ENST00000409604 LTKP29376 864 aa14.64□□□□□ -0.07
SNX13-202ENST00000409604 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
SNX13-202ENST00000409604 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
SNX13-202ENST00000409604 RAPGEF4Q8WZA2 1011 aa14.63□□□□□ -0.07
SNX13-202ENST00000409604 CFAP43Q8NDM7 1665 aa14.63□□□□□ -0.07
SNX13-202ENST00000409604 DUOX2Q9NRD8 1548 aa14.63□□□□□ -0.07
SNX13-202ENST00000409604 TTC37Q6PGP7 1564 aa14.63□□□□□ -0.07
SNX13-202ENST00000409604 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
SNX13-202ENST00000409604 TCOF1Q13428 1488 aaKnown RBP14.62□□□□□ -0.07
SNX13-202ENST00000409604 PHF8Q9UPP1 1060 aa14.62□□□□□ -0.07
SNX13-202ENST00000409604 CHMP3Q9Y3E7 222 aa14.62□□□□□ -0.07
SNX13-202ENST00000409604 KAT6BQ8WYB5 2073 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms