RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 C8orf34Q49A92 452 aa10.63□□□□□ -0.71
SNX13-201ENST00000409076 TESK2Q96S53 571 aa10.63□□□□□ -0.71
SNX13-201ENST00000409076 LNPKQ9C0E8 428 aa10.63□□□□□ -0.71
SNX13-201ENST00000409076 PDZRN3Q9UPQ7 1066 aa10.63□□□□□ -0.71
SNX13-201ENST00000409076 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
SNX13-201ENST00000409076 ERBINQ96RT1 1412 aa10.63□□□□□ -0.71
SNX13-201ENST00000409076 THUMPD2Q9BTF0 503 aaKnown RBP10.62□□□□□ -0.71
SNX13-201ENST00000409076 RLBP1P12271 317 aa10.62□□□□□ -0.71
SNX13-201ENST00000409076 MINK1Q8N4C8 1332 aaPredicted RBP10.61□□□□□ -0.71
SNX13-201ENST00000409076 KIF14Q15058 1648 aa10.61□□□□□ -0.71
SNX13-201ENST00000409076 HMOX1P09601 288 aa10.61□□□□□ -0.71
SNX13-201ENST00000409076 PLEKHH2Q8IVE3 1493 aa10.61□□□□□ -0.71
SNX13-201ENST00000409076 MAPK8IP3Q9UPT6 1336 aa10.6□□□□□ -0.71
SNX13-201ENST00000409076 KIAA0586Q9BVV6 1533 aa10.6□□□□□ -0.71
SNX13-201ENST00000409076 HSP90AB1P08238 724 aaKnown RBP10.6□□□□□ -0.71
SNX13-201ENST00000409076 SLFN5Q08AF3 891 aa10.6□□□□□ -0.71
SNX13-201ENST00000409076 ROCK1Q13464 1354 aa10.6□□□□□ -0.71
SNX13-201ENST00000409076 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
SNX13-201ENST00000409076 PANK2Q9BZ23 570 aa10.6□□□□□ -0.71
SNX13-201ENST00000409076 PCDHB15Q9Y5E8 787 aa10.59□□□□□ -0.71
SNX13-201ENST00000409076 RNF123Q5XPI4 1314 aa10.59□□□□□ -0.71
SNX13-201ENST00000409076 ADGRF5Q8IZF2 1346 aa10.59□□□□□ -0.71
SNX13-201ENST00000409076 MPNDQ8N594 471 aa10.59□□□□□ -0.71
SNX13-201ENST00000409076 CFAP53Q96M91 514 aa10.59□□□□□ -0.71
SNX13-201ENST00000409076 EFCAB2Q5VUJ9 269 aa10.58□□□□□ -0.72
SNX13-201ENST00000409076 KIF21AQ7Z4S6 1674 aa10.58□□□□□ -0.72
SNX13-201ENST00000409076 EXOSC9Q06265 439 aaKnown RBP10.58□□□□□ -0.72
SNX13-201ENST00000409076 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
SNX13-201ENST00000409076 TCOF1Q13428 1488 aaKnown RBP10.58□□□□□ -0.72
SNX13-201ENST00000409076 E9PSI1 815 aa10.58□□□□□ -0.72
SNX13-201ENST00000409076 WDR62O43379 1518 aa10.58□□□□□ -0.72
SNX13-201ENST00000409076 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
SNX13-201ENST00000409076 LRPPRCP42704 1394 aaKnown RBP10.56□□□□□ -0.72
SNX13-201ENST00000409076 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
SNX13-201ENST00000409076 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
SNX13-201ENST00000409076 ANKRD45Q5TZF3 282 aa10.56□□□□□ -0.72
SNX13-201ENST00000409076 CARD14Q9BXL6 1004 aa10.56□□□□□ -0.72
SNX13-201ENST00000409076 PARD3Q8TEW0 1356 aa10.56□□□□□ -0.72
SNX13-201ENST00000409076 HSCBQ8IWL3 235 aa10.56□□□□□ -0.72
SNX13-201ENST00000409076 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
SNX13-201ENST00000409076 SAMD9Q5K651 1589 aa10.56□□□□□ -0.72
SNX13-201ENST00000409076 CFAP65Q6ZU64 1925 aaKnown RBP10.55□□□□□ -0.72
SNX13-201ENST00000409076 DTNBO60941 627 aa10.55□□□□□ -0.72
SNX13-201ENST00000409076 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
SNX13-201ENST00000409076 RWDD1Q9H446 243 aaPredicted RBP10.54□□□□□ -0.72
SNX13-201ENST00000409076 TRIM44Q96DX7 344 aaPredicted RBP10.54□□□□□ -0.72
SNX13-201ENST00000409076 DISP1Q96F81 1524 aa10.54□□□□□ -0.72
SNX13-201ENST00000409076 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
SNX13-201ENST00000409076 GCC2Q8IWJ2 1684 aa10.53□□□□□ -0.72
SNX13-201ENST00000409076 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
SNX13-201ENST00000409076 RIPK4P57078 832 aa10.53□□□□□ -0.72
SNX13-201ENST00000409076 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
SNX13-201ENST00000409076 GRIN2AQ12879 1464 aa10.53□□□□□ -0.72
SNX13-201ENST00000409076 RALGAPBQ86X10 1494 aa10.53□□□□□ -0.72
SNX13-201ENST00000409076 MAGI1Q96QZ7 1491 aaPredicted RBP10.53□□□□□ -0.72
SNX13-201ENST00000409076 C22orf23Q9BZE7 217 aa10.52□□□□□ -0.72
SNX13-201ENST00000409076 PRAG1Q86YV5 1406 aa10.52□□□□□ -0.73
SNX13-201ENST00000409076 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
SNX13-201ENST00000409076 DZIP1LQ8IYY4 767 aaKnown RBP10.52□□□□□ -0.73
SNX13-201ENST00000409076 RBM42Q9BTD8 480 aaKnown RBP10.52□□□□□ -0.73
SNX13-201ENST00000409076 NOB1Q9ULX3 412 aaKnown RBP10.52□□□□□ -0.73
SNX13-201ENST00000409076 DNMT1P26358 1616 aaKnown RBP10.51□□□□□ -0.73
SNX13-201ENST00000409076 RAPGEF6Q8TEU7 1601 aa10.51□□□□□ -0.73
SNX13-201ENST00000409076 DCTN1Q14203 1278 aa10.51□□□□□ -0.73
SNX13-201ENST00000409076 ATP10BO94823 1461 aa10.51□□□□□ -0.73
SNX13-201ENST00000409076 RARSP54136 660 aaKnown RBP10.51□□□□□ -0.73
SNX13-201ENST00000409076 ZKSCAN2Q63HK3 967 aa10.51□□□□□ -0.73
SNX13-201ENST00000409076 CGNL1Q0VF96 1302 aa10.51□□□□□ -0.73
SNX13-201ENST00000409076 SLC4A10Q6U841 1118 aa10.51□□□□□ -0.73
SNX13-201ENST00000409076 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
SNX13-201ENST00000409076 PNNQ9H307 717 aaKnown RBP10.51□□□□□ -0.73
SNX13-201ENST00000409076 KDM5CP41229 1560 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 KDM2BQ8NHM5 1336 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 WASHC2CQ9Y4E1 1318 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 PMFBP1Q8TBY8 1022 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 MRC2Q9UBG0 1479 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 SCAPERQ9BY12 1400 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 RUNDC1Q96C34 613 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 ABCA5Q8WWZ7 1642 aa10.5□□□□□ -0.73
SNX13-201ENST00000409076 A2MP01023 1474 aa10.49□□□□□ -0.73
SNX13-201ENST00000409076 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNX13-201ENST00000409076 TMEM57Q8N5G2 664 aa10.49□□□□□ -0.73
SNX13-201ENST00000409076 NSD3Q9BZ95 1437 aa10.49□□□□□ -0.73
SNX13-201ENST00000409076 CHAMP1Q96JM3 812 aa10.49□□□□□ -0.73
SNX13-201ENST00000409076 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
SNX13-201ENST00000409076 SSH1Q8WYL5 1049 aa10.48□□□□□ -0.73
SNX13-201ENST00000409076 SYCP2Q9BX26 1530 aa10.48□□□□□ -0.73
SNX13-201ENST00000409076 KIAA0556O60303 1618 aa10.48□□□□□ -0.73
SNX13-201ENST00000409076 MAGI2Q86UL8 1455 aa10.48□□□□□ -0.73
SNX13-201ENST00000409076 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
SNX13-201ENST00000409076 TRAK2O60296 914 aa10.48□□□□□ -0.73
SNX13-201ENST00000409076 VSIG10Q8N0Z9 540 aa10.48□□□□□ -0.73
SNX13-201ENST00000409076 MYH16Q9H6N6 1097 aa10.48□□□□□ -0.73
SNX13-201ENST00000409076 FAM135AQ9P2D6 1515 aa10.47□□□□□ -0.73
SNX13-201ENST00000409076 KANK1Q14678 1352 aa10.47□□□□□ -0.73
SNX13-201ENST00000409076 RAPGEF3O95398 923 aa10.47□□□□□ -0.73
SNX13-201ENST00000409076 ATAD2Q6PL18 1390 aa10.46□□□□□ -0.73
SNX13-201ENST00000409076 MIS18AQ9NYP9 233 aa10.46□□□□□ -0.73
SNX13-201ENST00000409076 TSHZ3Q63HK5 1081 aa10.46□□□□□ -0.74
SNX13-201ENST00000409076 ADAMTS12P58397 1594 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms