RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
DUSP28-202ENST00000405954 MPNDQ8N594 471 aa17.54■□□□□ 0.4
DUSP28-202ENST00000405954 ABCC5O15440 1437 aa17.54■□□□□ 0.4
DUSP28-202ENST00000405954 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
DUSP28-202ENST00000405954 ABCA5Q8WWZ7 1642 aa17.53■□□□□ 0.4
DUSP28-202ENST00000405954 GOLGA2Q08379 1002 aa17.52■□□□□ 0.4
DUSP28-202ENST00000405954 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
DUSP28-202ENST00000405954 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.4
DUSP28-202ENST00000405954 STAC3Q96MF2 364 aa17.52■□□□□ 0.4
DUSP28-202ENST00000405954 DYNC1I1O14576 645 aa17.52■□□□□ 0.39
DUSP28-202ENST00000405954 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
DUSP28-202ENST00000405954 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
DUSP28-202ENST00000405954 CCDC94Q9BW85 323 aaPredicted RBP17.5■□□□□ 0.39
DUSP28-202ENST00000405954 GAS2L3Q86XJ1 694 aa17.49■□□□□ 0.39
DUSP28-202ENST00000405954 HECW1Q76N89 1606 aa17.49■□□□□ 0.39
DUSP28-202ENST00000405954 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
DUSP28-202ENST00000405954 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
DUSP28-202ENST00000405954 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
DUSP28-202ENST00000405954 TEX14Q8IWB6 1497 aa17.48■□□□□ 0.39
DUSP28-202ENST00000405954 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
DUSP28-202ENST00000405954 RPRD2Q5VT52 1461 aaKnown RBP17.48■□□□□ 0.39
DUSP28-202ENST00000405954 DMTNQ08495 405 aa17.48■□□□□ 0.39
DUSP28-202ENST00000405954 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
DUSP28-202ENST00000405954 PTMSP20962 102 aa17.47■□□□□ 0.39
DUSP28-202ENST00000405954 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
DUSP28-202ENST00000405954 RNF214Q8ND24 703 aa17.47■□□□□ 0.39
DUSP28-202ENST00000405954 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
DUSP28-202ENST00000405954 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
DUSP28-202ENST00000405954 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
DUSP28-202ENST00000405954 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
DUSP28-202ENST00000405954 SASS6Q6UVJ0 657 aa17.46■□□□□ 0.39
DUSP28-202ENST00000405954 IPO4Q8TEX9 1081 aaKnown RBP17.46■□□□□ 0.39
DUSP28-202ENST00000405954 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
DUSP28-202ENST00000405954 PANK1Q8TE04 598 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 TSC1Q92574 1164 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 NUP155O75694 1391 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 BCAR3O75815 825 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 IGHDP01880 384 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 DHX29Q7Z478 1369 aaKnown RBP17.45■□□□□ 0.38
DUSP28-202ENST00000405954 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
DUSP28-202ENST00000405954 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
DUSP28-202ENST00000405954 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
DUSP28-202ENST00000405954 ANTXR1Q9H6X2 564 aa17.44■□□□□ 0.38
DUSP28-202ENST00000405954 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
DUSP28-202ENST00000405954 LETM1O95202 739 aaPredicted RBP17.43■□□□□ 0.38
DUSP28-202ENST00000405954 TBC1D32Q96NH3 1257 aa17.43■□□□□ 0.38
DUSP28-202ENST00000405954 KIF20AO95235 890 aa17.42■□□□□ 0.38
DUSP28-202ENST00000405954 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
DUSP28-202ENST00000405954 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
DUSP28-202ENST00000405954 WDR62O43379 1518 aa17.42■□□□□ 0.38
DUSP28-202ENST00000405954 KCNJ4P48050 445 aa17.42■□□□□ 0.38
DUSP28-202ENST00000405954 MCTP1Q6DN14 999 aa17.42■□□□□ 0.38
DUSP28-202ENST00000405954 GTPBP4Q9BZE4 634 aaKnown RBP17.41■□□□□ 0.38
DUSP28-202ENST00000405954 PMFBP1Q8TBY8 1022 aa17.41■□□□□ 0.38
DUSP28-202ENST00000405954 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
DUSP28-202ENST00000405954 NUP153P49790 1475 aaKnown RBP17.41■□□□□ 0.38
DUSP28-202ENST00000405954 PZPP20742 1482 aa17.4■□□□□ 0.38
DUSP28-202ENST00000405954 ZBTB22O15209 634 aa17.4■□□□□ 0.38
DUSP28-202ENST00000405954 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
DUSP28-202ENST00000405954 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
DUSP28-202ENST00000405954 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
DUSP28-202ENST00000405954 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
DUSP28-202ENST00000405954 UTP14CQ5TAP6 766 aaKnown RBP17.39■□□□□ 0.37
DUSP28-202ENST00000405954 FOXD4L5Q5VV16 416 aaPredicted RBP17.39■□□□□ 0.37
DUSP28-202ENST00000405954 FOXD4L4Q8WXT5 416 aaPredicted RBP17.39■□□□□ 0.37
DUSP28-202ENST00000405954 CCDC39Q9UFE4 941 aa17.39■□□□□ 0.37
DUSP28-202ENST00000405954 TERF1P54274 439 aa17.38■□□□□ 0.37
DUSP28-202ENST00000405954 TRERF1Q96PN7 1200 aa17.38■□□□□ 0.37
DUSP28-202ENST00000405954 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
DUSP28-202ENST00000405954 FTSJ3Q8IY81 847 aaKnown RBP17.38■□□□□ 0.37
DUSP28-202ENST00000405954 PDCL2Q8N4E4 241 aa17.38■□□□□ 0.37
DUSP28-202ENST00000405954 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
DUSP28-202ENST00000405954 MIA2Q96PC5 1412 aa17.37■□□□□ 0.37
DUSP28-202ENST00000405954 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
DUSP28-202ENST00000405954 TAF3Q5VWG9 929 aa17.37■□□□□ 0.37
DUSP28-202ENST00000405954 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
DUSP28-202ENST00000405954 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
DUSP28-202ENST00000405954 USP19O94966 1318 aa17.36■□□□□ 0.37
DUSP28-202ENST00000405954 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
DUSP28-202ENST00000405954 KIF14Q15058 1648 aa17.35■□□□□ 0.37
DUSP28-202ENST00000405954 HMGN5P82970 282 aaKnown RBP17.34■□□□□ 0.37
DUSP28-202ENST00000405954 ZSCAN20P17040 1043 aaPredicted RBP17.34■□□□□ 0.37
DUSP28-202ENST00000405954 ERICH4A6NGS2 130 aa17.34■□□□□ 0.37
DUSP28-202ENST00000405954 ZKSCAN5Q9Y2L8 839 aa17.34■□□□□ 0.37
DUSP28-202ENST00000405954 CERS3Q8IU89 383 aa17.33■□□□□ 0.37
DUSP28-202ENST00000405954 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.37
DUSP28-202ENST00000405954 IFT140Q96RY7 1462 aa17.33■□□□□ 0.36
DUSP28-202ENST00000405954 DISP1Q96F81 1524 aa17.33■□□□□ 0.36
DUSP28-202ENST00000405954 PANK3Q9H999 370 aa17.33■□□□□ 0.36
DUSP28-202ENST00000405954 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
DUSP28-202ENST00000405954 ZNF830Q96NB3 372 aaPredicted RBP17.32■□□□□ 0.36
DUSP28-202ENST00000405954 NOL7Q9UMY1 257 aaKnown RBP17.32■□□□□ 0.36
DUSP28-202ENST00000405954 ANKRD50Q9ULJ7 1429 aa17.32■□□□□ 0.36
DUSP28-202ENST00000405954 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
DUSP28-202ENST00000405954 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
DUSP28-202ENST00000405954 APAF1O14727 1248 aa17.31■□□□□ 0.36
DUSP28-202ENST00000405954 SSFA2P28290 1259 aa17.31■□□□□ 0.36
DUSP28-202ENST00000405954 KIAA1107Q9UPP5 1409 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms