RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ANKRD30AQ9BXX3 1397 aa15.89■□□□□ 0.13
RPAIN-204ENST00000405578 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
RPAIN-204ENST00000405578 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
RPAIN-204ENST00000405578 CROCC2H7BZ55 1655 aa15.89■□□□□ 0.13
RPAIN-204ENST00000405578 MYO5BQ9ULV0 1848 aa15.87■□□□□ 0.13
RPAIN-204ENST00000405578 ADGRB3O60242 1522 aa15.86■□□□□ 0.13
RPAIN-204ENST00000405578 MEX3CQ5U5Q3 659 aaKnown RBP15.86■□□□□ 0.13
RPAIN-204ENST00000405578 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
RPAIN-204ENST00000405578 SLAIN2Q9P270 581 aa15.86■□□□□ 0.13
RPAIN-204ENST00000405578 ZNF772Q68DY9 489 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-204ENST00000405578 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
RPAIN-204ENST00000405578 SPATA31A6Q5VVP1 1343 aa15.84■□□□□ 0.13
RPAIN-204ENST00000405578 ROCK1Q13464 1354 aa15.84■□□□□ 0.13
RPAIN-204ENST00000405578 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.13
RPAIN-204ENST00000405578 ERBINQ96RT1 1412 aa15.83■□□□□ 0.12
RPAIN-204ENST00000405578 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-204ENST00000405578 ADGRL2O95490 1459 aa15.81■□□□□ 0.12
RPAIN-204ENST00000405578 IDI1Q13907 227 aa15.81■□□□□ 0.12
RPAIN-204ENST00000405578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■□□□□ 10.3
RPAIN-204ENST00000405578 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
RPAIN-204ENST00000405578 CDK12Q9NYV4 1490 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-204ENST00000405578 BCANQ96GW7 911 aa15.8■□□□□ 0.12
RPAIN-204ENST00000405578 RXRBP28702 533 aa15.79■□□□□ 0.12
RPAIN-204ENST00000405578 DIP2AQ14689 1571 aa15.79■□□□□ 0.12
RPAIN-204ENST00000405578 LMTK2Q8IWU2 1503 aa15.78■□□□□ 0.12
RPAIN-204ENST00000405578 KANK1Q14678 1352 aa15.78■□□□□ 0.12
RPAIN-204ENST00000405578 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.12
RPAIN-204ENST00000405578 NOS1P29475 1434 aa15.77■□□□□ 0.11
RPAIN-204ENST00000405578 ANKRD50Q9ULJ7 1429 aa15.76■□□□□ 0.11
RPAIN-204ENST00000405578 NUTM2BA6NNL0 878 aaPredicted RBP15.74■□□□□ 0.11
RPAIN-204ENST00000405578 NUTM2EB1AL46 878 aaPredicted RBP15.74■□□□□ 0.11
RPAIN-204ENST00000405578 C14orf37Q86TY3 774 aa15.74■□□□□ 0.11
RPAIN-204ENST00000405578 NUTM2AQ8IVF1 878 aaPredicted RBP15.74■□□□□ 0.11
RPAIN-204ENST00000405578 ZFYVE9O95405 1425 aa15.74■□□□□ 0.11
RPAIN-204ENST00000405578 PLEKHG1Q9ULL1 1385 aa15.74■□□□□ 0.11
RPAIN-204ENST00000405578 RGS12O14924 1447 aa15.73■□□□□ 0.11
RPAIN-204ENST00000405578 NCOA3Q9Y6Q9 1424 aa15.73■□□□□ 0.11
RPAIN-204ENST00000405578 AFF2P51816 1311 aa15.72■□□□□ 0.11
RPAIN-204ENST00000405578 ACIN1Q9UKV3 1341 aaKnown RBP15.72■□□□□ 0.11
RPAIN-204ENST00000405578 HFM1A2PYH4 1435 aa15.72■□□□□ 0.11
RPAIN-204ENST00000405578 TMEM131LA2VDJ0 1609 aa15.72■□□□□ 0.11
RPAIN-204ENST00000405578 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
RPAIN-204ENST00000405578 RIMS2Q9UQ26 1411 aa15.71■□□□□ 0.11
RPAIN-204ENST00000405578 SRCAPQ6ZRS2 3230 aa15.71■□□□□ 0.11
RPAIN-204ENST00000405578 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
RPAIN-204ENST00000405578 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
RPAIN-204ENST00000405578 NAIPQ13075 1403 aa15.69■□□□□ 0.1
RPAIN-204ENST00000405578 ASXL1Q8IXJ9 1541 aa15.68■□□□□ 0.1
RPAIN-204ENST00000405578 ATF3P18847 181 aa15.68■□□□□ 0.1
RPAIN-204ENST00000405578 SLC52A1Q9NWF4 448 aa15.68■□□□□ 0.1
RPAIN-204ENST00000405578 BRINP3Q76B58 766 aa15.66■□□□□ 0.1
RPAIN-204ENST00000405578 C19orf44Q9H6X5 657 aa15.66■□□□□ 0.1
RPAIN-204ENST00000405578 TBX22Q9Y458 520 aa15.66■□□□□ 0.1
RPAIN-204ENST00000405578 ADAMTS13Q76LX8 1427 aa15.66■□□□□ 0.1
RPAIN-204ENST00000405578 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
RPAIN-204ENST00000405578 RPRD2Q5VT52 1461 aaKnown RBP15.65■□□□□ 0.1
RPAIN-204ENST00000405578 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-204ENST00000405578 TRPM2O94759 1503 aa15.64■□□□□ 0.09
RPAIN-204ENST00000405578 RBM6P78332 1123 aaKnown RBP15.64■□□□□ 0.09
RPAIN-204ENST00000405578 C8orf37Q96NL8 207 aa15.63■□□□□ 0.09
RPAIN-204ENST00000405578 NUP155O75694 1391 aa15.62■□□□□ 0.09
RPAIN-204ENST00000405578 PIK3R4Q99570 1358 aa15.62■□□□□ 0.09
RPAIN-204ENST00000405578 SETBP1Q9Y6X0 1596 aa15.62■□□□□ 0.09
RPAIN-204ENST00000405578 HDGFP51858 240 aaKnown RBP15.62■□□□□ 0.09
RPAIN-204ENST00000405578 QTRT2Q9H974 415 aaKnown RBP15.62■□□□□ 0.09
RPAIN-204ENST00000405578 XRN1Q8IZH2 1706 aaKnown RBP15.62■□□□□ 0.09
RPAIN-204ENST00000405578 UNC13BO14795 1591 aa15.62■□□□□ 0.09
RPAIN-204ENST00000405578 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
RPAIN-204ENST00000405578 DCCP43146 1447 aa15.61■□□□□ 0.09
RPAIN-204ENST00000405578 HRCP23327 699 aa15.61■□□□□ 0.09
RPAIN-204ENST00000405578 MST1RQ04912 1400 aa15.6■□□□□ 0.09
RPAIN-204ENST00000405578 PTPRUQ92729 1446 aa15.6■□□□□ 0.09
RPAIN-204ENST00000405578 CHGAP10645 457 aaKnown RBP15.59■□□□□ 0.09
RPAIN-204ENST00000405578 E9PCH4 1651 aa15.59■□□□□ 0.09
RPAIN-204ENST00000405578 PNPLA6Q8IY17 1366 aa15.59■□□□□ 0.09
RPAIN-204ENST00000405578 RAB3GAP2Q9H2M9 1393 aa15.59■□□□□ 0.09
RPAIN-204ENST00000405578 NALCNQ8IZF0 1738 aa15.58■□□□□ 0.08
RPAIN-204ENST00000405578 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.58■□□□□ 0.08
RPAIN-204ENST00000405578 NRXN3Q9Y4C0 1643 aa15.57■□□□□ 0.08
RPAIN-204ENST00000405578 LRRC59Q96AG4 307 aaKnown RBP15.57■□□□□ 0.08
RPAIN-204ENST00000405578 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
RPAIN-204ENST00000405578 ZRANB1Q9UGI0 708 aa15.57■□□□□ 0.08
RPAIN-204ENST00000405578 AMOTL2Q9Y2J4 779 aa15.57■□□□□ 0.08
RPAIN-204ENST00000405578 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
RPAIN-204ENST00000405578 ADAMTS2O95450 1211 aa15.55■□□□□ 0.08
RPAIN-204ENST00000405578 DDX17Q92841 729 aaKnown RBP15.55■□□□□ 0.08
RPAIN-204ENST00000405578 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
RPAIN-204ENST00000405578 EP400Q96L91 3159 aa15.55■□□□□ 0.08
RPAIN-204ENST00000405578 FOXD1Q16676 465 aa15.54■□□□□ 0.08
RPAIN-204ENST00000405578 LAMC1P11047 1609 aa15.52■□□□□ 0.08
RPAIN-204ENST00000405578 MARF1Q9Y4F3 1742 aaKnown RBP15.51■□□□□ 0.07
RPAIN-204ENST00000405578 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
RPAIN-204ENST00000405578 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
RPAIN-204ENST00000405578 MPHOSPH9Q99550 1183 aa15.5■□□□□ 0.07
RPAIN-204ENST00000405578 USP21Q9UK80 565 aa15.5■□□□□ 0.07
RPAIN-204ENST00000405578 ATRNO75882 1429 aa15.49■□□□□ 0.07
RPAIN-204ENST00000405578 COL22A1Q8NFW1 1626 aaPredicted RBP15.48■□□□□ 0.07
RPAIN-204ENST00000405578 TRPC5Q9UL62 973 aaPredicted RBP15.48■□□□□ 0.07
RPAIN-204ENST00000405578 PTCH1Q13635 1447 aa15.46■□□□□ 0.07
RPAIN-204ENST00000405578 LRP5O75197 1615 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms