RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 C20orf194Q5TEA3 1177 aa19.59■□□□□ 0.73
ATG4B-206ENST00000405546 WASHC2CQ9Y4E1 1318 aa19.59■□□□□ 0.73
ATG4B-206ENST00000405546 APAF1O14727 1248 aa19.58■□□□□ 0.73
ATG4B-206ENST00000405546 SAFB2Q14151 953 aaKnown RBP eCLIP19.58■□□□□ 0.73
ATG4B-206ENST00000405546 RGS3P49796 1198 aa19.58■□□□□ 0.72
ATG4B-206ENST00000405546 DUOX2Q9NRD8 1548 aa19.58■□□□□ 0.72
ATG4B-206ENST00000405546 USP35Q9P2H5 1018 aa19.57■□□□□ 0.72
ATG4B-206ENST00000405546 GOLGA2Q08379 1002 aa19.56■□□□□ 0.72
ATG4B-206ENST00000405546 ADGRF5Q8IZF2 1346 aa19.56■□□□□ 0.72
ATG4B-206ENST00000405546 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
ATG4B-206ENST00000405546 TMEM132EQ6IEE7 984 aa19.56■□□□□ 0.72
ATG4B-206ENST00000405546 COL17A1Q9UMD9 1497 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-206ENST00000405546 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
ATG4B-206ENST00000405546 AMER1Q5JTC6 1135 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-206ENST00000405546 RRP7AQ9Y3A4 280 aaKnown RBP19.51■□□□□ 0.71
ATG4B-206ENST00000405546 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.5■□□□□ 0.71
ATG4B-206ENST00000405546 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
ATG4B-206ENST00000405546 MYO5CQ9NQX4 1742 aa19.5■□□□□ 0.71
ATG4B-206ENST00000405546 EIF3AQ14152 1382 aaKnown RBP19.49■□□□□ 0.71
ATG4B-206ENST00000405546 MORC1Q86VD1 984 aa19.49■□□□□ 0.71
ATG4B-206ENST00000405546 SLC12A5Q9H2X9 1139 aa19.48■□□□□ 0.71
ATG4B-206ENST00000405546 STK26Q9P289 416 aa19.48■□□□□ 0.71
ATG4B-206ENST00000405546 FANCAO15360 1455 aa19.47■□□□□ 0.71
ATG4B-206ENST00000405546 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
ATG4B-206ENST00000405546 DDRGK1Q96HY6 314 aa19.46■□□□□ 0.71
ATG4B-206ENST00000405546 PLEKHH1Q9ULM0 1364 aa19.45■□□□□ 0.7
ATG4B-206ENST00000405546 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
ATG4B-206ENST00000405546 BCAR3O75815 825 aa19.45■□□□□ 0.7
ATG4B-206ENST00000405546 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
ATG4B-206ENST00000405546 SCAF11Q99590 1463 aaKnown RBP19.44■□□□□ 0.7
ATG4B-206ENST00000405546 CARD14Q9BXL6 1004 aa19.43■□□□□ 0.7
ATG4B-206ENST00000405546 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-206ENST00000405546 ADGRL1O94910 1474 aa19.43■□□□□ 0.7
ATG4B-206ENST00000405546 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-206ENST00000405546 UNC13BO14795 1591 aa19.42■□□□□ 0.7
ATG4B-206ENST00000405546 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
ATG4B-206ENST00000405546 PRDM15P57071 1507 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-206ENST00000405546 STAC3Q96MF2 364 aa19.42■□□□□ 0.7
ATG4B-206ENST00000405546 CENPJQ9HC77 1338 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-206ENST00000405546 ZCCHC11Q5TAX3 1644 aaKnown RBP19.42■□□□□ 0.7
ATG4B-206ENST00000405546 ATP10AO60312 1499 aa19.41■□□□□ 0.7
ATG4B-206ENST00000405546 POGKQ9P215 609 aa19.41■□□□□ 0.7
ATG4B-206ENST00000405546 IQGAP3Q86VI3 1631 aa19.41■□□□□ 0.7
ATG4B-206ENST00000405546 MS4A1P11836 297 aa19.4■□□□□ 0.7
ATG4B-206ENST00000405546 SPRYD3Q8NCJ5 442 aa19.4■□□□□ 0.7
ATG4B-206ENST00000405546 WDR7Q9Y4E6 1490 aa19.39■□□□□ 0.69
ATG4B-206ENST00000405546 BCL2L13Q9BXK5 485 aa19.39■□□□□ 0.69
ATG4B-206ENST00000405546 ABCC1P33527 1531 aa19.39■□□□□ 0.69
ATG4B-206ENST00000405546 UGGT1Q9NYU2 1555 aa19.39■□□□□ 0.69
ATG4B-206ENST00000405546 EIF2AK4Q9P2K8 1649 aaKnown RBP19.38■□□□□ 0.69
ATG4B-206ENST00000405546 SLFN5Q08AF3 891 aa19.38■□□□□ 0.69
ATG4B-206ENST00000405546 PLXNC1O60486 1568 aa19.38■□□□□ 0.69
ATG4B-206ENST00000405546 SLC24A1O60721 1099 aa19.37■□□□□ 0.69
ATG4B-206ENST00000405546 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
ATG4B-206ENST00000405546 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
ATG4B-206ENST00000405546 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
ATG4B-206ENST00000405546 GZF1Q9H116 711 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-206ENST00000405546 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
ATG4B-206ENST00000405546 BLMP54132 1417 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-206ENST00000405546 RTEL1-TNFRSF6BF6WH68 1400 aa19.35■□□□□ 0.69
ATG4B-206ENST00000405546 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
ATG4B-206ENST00000405546 CABP2Q9NPB3 220 aa19.35■□□□□ 0.69
ATG4B-206ENST00000405546 COG6Q9Y2V7 657 aa19.35■□□□□ 0.69
ATG4B-206ENST00000405546 ASXL2Q76L83 1435 aa19.34■□□□□ 0.69
ATG4B-206ENST00000405546 U2SURPO15042 1029 aaKnown RBP19.34■□□□□ 0.69
ATG4B-206ENST00000405546 U2AF1L5P0DN76 240 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-206ENST00000405546 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
ATG4B-206ENST00000405546 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
ATG4B-206ENST00000405546 NOS1P29475 1434 aa19.34■□□□□ 0.69
ATG4B-206ENST00000405546 MTHFSP49914 203 aa19.34■□□□□ 0.69
ATG4B-206ENST00000405546 E9PSI1 815 aa19.33■□□□□ 0.68
ATG4B-206ENST00000405546 PANK1Q8TE04 598 aa19.33■□□□□ 0.68
ATG4B-206ENST00000405546 RRAGDQ9NQL2 400 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-206ENST00000405546 SHROOM2Q13796 1616 aa19.32■□□□□ 0.68
ATG4B-206ENST00000405546 CENPQQ7L2Z9 268 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-206ENST00000405546 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-206ENST00000405546 VSIG10Q8N0Z9 540 aa19.31■□□□□ 0.68
ATG4B-206ENST00000405546 CFAP53Q96M91 514 aa19.31■□□□□ 0.68
ATG4B-206ENST00000405546 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
ATG4B-206ENST00000405546 E9PCH4 1651 aa19.31■□□□□ 0.68
ATG4B-206ENST00000405546 ATP7AQ04656 1500 aa19.31■□□□□ 0.68
ATG4B-206ENST00000405546 TCP11L2Q8N4U5 519 aa19.3■□□□□ 0.68
ATG4B-206ENST00000405546 PKNOX2Q96KN3 472 aa19.29■□□□□ 0.68
ATG4B-206ENST00000405546 PTPRTO14522 1441 aa19.29■□□□□ 0.68
ATG4B-206ENST00000405546 C8orf34Q49A92 452 aa19.29■□□□□ 0.68
ATG4B-206ENST00000405546 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
ATG4B-206ENST00000405546 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
ATG4B-206ENST00000405546 WWC1Q8IX03 1113 aa19.28■□□□□ 0.68
ATG4B-206ENST00000405546 RSPH6AQ9H0K4 717 aa19.28■□□□□ 0.68
ATG4B-206ENST00000405546 NSD3Q9BZ95 1437 aa19.28■□□□□ 0.68
ATG4B-206ENST00000405546 FAM161AQ3B820 660 aa19.28■□□□□ 0.68
ATG4B-206ENST00000405546 CLTCL1P53675 1640 aa19.27■□□□□ 0.68
ATG4B-206ENST00000405546 ZMYM4Q5VZL5 1548 aa19.27■□□□□ 0.68
ATG4B-206ENST00000405546 TRPM2O94759 1503 aa19.27■□□□□ 0.67
ATG4B-206ENST00000405546 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-206ENST00000405546 CD109Q6YHK3 1445 aa19.26■□□□□ 0.67
ATG4B-206ENST00000405546 GGNBP2Q9H3C7 697 aa19.26■□□□□ 0.67
ATG4B-206ENST00000405546 VGFO15240 615 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-206ENST00000405546 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
ATG4B-206ENST00000405546 MLECQ14165 292 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms