RNA–Protein interactions for RNA: ENST00000403915.5

KCNS3-202, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-202ENST00000403915 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
KCNS3-202ENST00000403915 RAI14Q9P0K7 980 aa11.7□□□□□ -0.54
KCNS3-202ENST00000403915 R3HCC1Q9Y3T6 440 aaKnown RBP11.7□□□□□ -0.54
KCNS3-202ENST00000403915 OTUD6BQ8N6M0 293 aa11.69□□□□□ -0.54
KCNS3-202ENST00000403915 MYCBPQ99417 103 aaPredicted RBP11.69□□□□□ -0.54
KCNS3-202ENST00000403915 TSPYL1Q9H0U9 437 aa11.69□□□□□ -0.54
KCNS3-202ENST00000403915 CAPN2P17655 700 aa11.68□□□□□ -0.54
KCNS3-202ENST00000403915 ZNF771Q7L3S4 317 aaPredicted RBP11.68□□□□□ -0.54
KCNS3-202ENST00000403915 DIP2BQ9P265 1576 aa11.68□□□□□ -0.54
KCNS3-202ENST00000403915 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
KCNS3-202ENST00000403915 TMTC2Q8N394 836 aa11.68□□□□□ -0.54
KCNS3-202ENST00000403915 TULP2O00295 520 aa11.67□□□□□ -0.54
KCNS3-202ENST00000403915 CCDC172P0C7W6 258 aa11.67□□□□□ -0.54
KCNS3-202ENST00000403915 MRE11P49959 708 aa11.67□□□□□ -0.54
KCNS3-202ENST00000403915 DDX10Q13206 875 aaKnown RBP11.67□□□□□ -0.54
KCNS3-202ENST00000403915 TIGD1Q96MW7 591 aa11.67□□□□□ -0.54
KCNS3-202ENST00000403915 SIN3AQ96ST3 1273 aa11.67□□□□□ -0.54
KCNS3-202ENST00000403915 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
KCNS3-202ENST00000403915 ZBED9Q6R2W3 1325 aa11.66□□□□□ -0.54
KCNS3-202ENST00000403915 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
KCNS3-202ENST00000403915 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
KCNS3-202ENST00000403915 CCDC88BA6NC98 1476 aa11.66□□□□□ -0.54
KCNS3-202ENST00000403915 FBLN2P98095 1184 aa11.65□□□□□ -0.54
KCNS3-202ENST00000403915 ZNF513Q8N8E2 541 aaPredicted RBP11.65□□□□□ -0.54
KCNS3-202ENST00000403915 AQRO60306 1485 aaKnown RBP eCLIP11.65□□□□□ -0.54
KCNS3-202ENST00000403915 ANP32CO43423 234 aa11.65□□□□□ -0.54
KCNS3-202ENST00000403915 SGSM3Q96HU1 749 aa11.65□□□□□ -0.54
KCNS3-202ENST00000403915 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
KCNS3-202ENST00000403915 CCDC66A2RUB6 948 aa11.64□□□□□ -0.55
KCNS3-202ENST00000403915 SSR1P43307 286 aaKnown RBP11.64□□□□□ -0.55
KCNS3-202ENST00000403915 CASC1Q6TDU7 716 aa11.64□□□□□ -0.55
KCNS3-202ENST00000403915 CHMP7Q8WUX9 453 aaPredicted RBP11.64□□□□□ -0.55
KCNS3-202ENST00000403915 NCAPGQ9BPX3 1015 aa11.64□□□□□ -0.55
KCNS3-202ENST00000403915 NBPF6Q5VWK0 638 aa11.63□□□□□ -0.55
KCNS3-202ENST00000403915 NBPF5PQ86XG9 351 aaPredicted RBP11.63□□□□□ -0.55
KCNS3-202ENST00000403915 NBPF4Q96M43 638 aa11.63□□□□□ -0.55
KCNS3-202ENST00000403915 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
KCNS3-202ENST00000403915 MS4A1P11836 297 aa11.63□□□□□ -0.55
KCNS3-202ENST00000403915 BORCS6Q96GS4 357 aa11.62□□□□□ -0.55
KCNS3-202ENST00000403915 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
KCNS3-202ENST00000403915 FAM69CQ0P6D2 419 aa11.61□□□□□ -0.55
KCNS3-202ENST00000403915 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
KCNS3-202ENST00000403915 TNNT3P45378 269 aaPredicted RBP11.61□□□□□ -0.55
KCNS3-202ENST00000403915 GTF2A1P52655 376 aaPredicted RBP11.61□□□□□ -0.55
KCNS3-202ENST00000403915 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
KCNS3-202ENST00000403915 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
KCNS3-202ENST00000403915 ZSCAN30Q86W11 494 aa11.6□□□□□ -0.55
KCNS3-202ENST00000403915 ZNF428Q96B54 188 aa11.6□□□□□ -0.55
KCNS3-202ENST00000403915 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
KCNS3-202ENST00000403915 SHROOM2Q13796 1616 aa11.59□□□□□ -0.55
KCNS3-202ENST00000403915 KDM4AO75164 1064 aa11.59□□□□□ -0.55
KCNS3-202ENST00000403915 ZKSCAN8Q15776 578 aaPredicted RBP11.59□□□□□ -0.55
KCNS3-202ENST00000403915 MSNP26038 577 aaKnown RBP11.58□□□□□ -0.56
KCNS3-202ENST00000403915 ARMCX6Q7L4S7 300 aa11.58□□□□□ -0.56
KCNS3-202ENST00000403915 GRPEL1Q9HAV7 217 aa11.58□□□□□ -0.56
KCNS3-202ENST00000403915 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
KCNS3-202ENST00000403915 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
KCNS3-202ENST00000403915 BSDC1Q9NW68 430 aaPredicted RBP11.57□□□□□ -0.56
KCNS3-202ENST00000403915 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
KCNS3-202ENST00000403915 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
KCNS3-202ENST00000403915 DNAJC14Q6Y2X3 702 aaPredicted RBP11.56□□□□□ -0.56
KCNS3-202ENST00000403915 RINLQ6ZS11 566 aa11.56□□□□□ -0.56
KCNS3-202ENST00000403915 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
KCNS3-202ENST00000403915 MRVI1Q9Y6F6 885 aa11.56□□□□□ -0.56
KCNS3-202ENST00000403915 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
KCNS3-202ENST00000403915 CT47B1P0C2W7 299 aaPredicted RBP11.55□□□□□ -0.56
KCNS3-202ENST00000403915 HSP90AB4PQ58FF6 505 aa11.55□□□□□ -0.56
KCNS3-202ENST00000403915 FAM177A1Q8N128 213 aaPredicted RBP11.55□□□□□ -0.56
KCNS3-202ENST00000403915 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
KCNS3-202ENST00000403915 FEZ2Q9UHY8 353 aaPredicted RBP11.55□□□□□ -0.56
KCNS3-202ENST00000403915 GLI2P10070 1586 aa11.55□□□□□ -0.56
KCNS3-202ENST00000403915 DONSONQ9NYP3 566 aa11.55□□□□□ -0.56
KCNS3-202ENST00000403915 ZNF853P0CG23 659 aa11.54□□□□□ -0.56
KCNS3-202ENST00000403915 SASS6Q6UVJ0 657 aa11.54□□□□□ -0.56
KCNS3-202ENST00000403915 CALCOCO1Q9P1Z2 691 aa11.54□□□□□ -0.56
KCNS3-202ENST00000403915 NOP2P46087 812 aaKnown RBP11.54□□□□□ -0.56
KCNS3-202ENST00000403915 TDO2P48775 406 aa11.54□□□□□ -0.56
KCNS3-202ENST00000403915 MFAP1P55081 439 aaKnown RBP11.54□□□□□ -0.56
KCNS3-202ENST00000403915 TSHZ1Q6ZSZ6 1077 aa11.54□□□□□ -0.56
KCNS3-202ENST00000403915 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
KCNS3-202ENST00000403915 CEP170Q5SW79 1584 aa11.53□□□□□ -0.56
KCNS3-202ENST00000403915 FOXD4L6Q3SYB3 417 aaPredicted RBP11.53□□□□□ -0.56
KCNS3-202ENST00000403915 DNAJC21Q5F1R6 531 aaKnown RBP11.53□□□□□ -0.56
KCNS3-202ENST00000403915 FOXD4L3Q6VB84 417 aaPredicted RBP11.53□□□□□ -0.56
KCNS3-202ENST00000403915 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
KCNS3-202ENST00000403915 GZF1Q9H116 711 aaPredicted RBP11.53□□□□□ -0.56
KCNS3-202ENST00000403915 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.56
KCNS3-202ENST00000403915 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
KCNS3-202ENST00000403915 MPHOSPH10O00566 681 aaKnown RBP11.52□□□□□ -0.57
KCNS3-202ENST00000403915 TNNT1P13805 278 aa11.52□□□□□ -0.57
KCNS3-202ENST00000403915 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.57
KCNS3-202ENST00000403915 IPO8O15397 1037 aaKnown RBP11.51□□□□□ -0.57
KCNS3-202ENST00000403915 POLD1P28340 1107 aa11.51□□□□□ -0.57
KCNS3-202ENST00000403915 ITFG2Q969R8 447 aa11.51□□□□□ -0.57
KCNS3-202ENST00000403915 RSPH14Q9UHP6 348 aa11.51□□□□□ -0.57
KCNS3-202ENST00000403915 MTA1Q13330 715 aa11.5□□□□□ -0.57
KCNS3-202ENST00000403915 CTR9Q6PD62 1173 aa11.5□□□□□ -0.57
KCNS3-202ENST00000403915 KIF1CO43896 1103 aaKnown RBP11.5□□□□□ -0.57
KCNS3-202ENST00000403915 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
KCNS3-202ENST00000403915 GABPB1Q06547 395 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms