RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 EFCAB6Q5THR3 1501 aa26.62■■□□□ 1.85
CCDC47-202ENST00000403162 RALBP1Q15311 655 aa26.62■■□□□ 1.85
CCDC47-202ENST00000403162 ST20-MTHFSA0A0A6YYL1 179 aa26.6■■□□□ 1.85
CCDC47-202ENST00000403162 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
CCDC47-202ENST00000403162 PLA2R1Q13018 1463 aa26.59■■□□□ 1.85
CCDC47-202ENST00000403162 ZC3H13Q5T200 1668 aaKnown RBP26.59■■□□□ 1.85
CCDC47-202ENST00000403162 NOP58Q9Y2X3 529 aaKnown RBP26.57■■□□□ 1.84
CCDC47-202ENST00000403162 CAMSAP1Q5T5Y3 1602 aa26.57■■□□□ 1.84
CCDC47-202ENST00000403162 TRPM1Q7Z4N2 1603 aa26.56■■□□□ 1.84
CCDC47-202ENST00000403162 NPATQ14207 1427 aa26.55■■□□□ 1.84
CCDC47-202ENST00000403162 CCDC144AA2RUR9 1427 aa26.55■■□□□ 1.84
CCDC47-202ENST00000403162 DCAF11Q8TEB1 546 aa26.54■■□□□ 1.84
CCDC47-202ENST00000403162 ESF1Q9H501 851 aaKnown RBP26.53■■□□□ 1.84
CCDC47-202ENST00000403162 PTPRTO14522 1441 aa26.52■■□□□ 1.84
CCDC47-202ENST00000403162 SPHKAPQ2M3C7 1700 aa26.52■■□□□ 1.84
CCDC47-202ENST00000403162 KDM2AQ9Y2K7 1162 aa26.52■■□□□ 1.84
CCDC47-202ENST00000403162 CLTCQ00610 1675 aaKnown RBP26.51■■□□□ 1.83
CCDC47-202ENST00000403162 PRAG1Q86YV5 1406 aa26.5■■□□□ 1.83
CCDC47-202ENST00000403162 TRPM2O94759 1503 aa26.5■■□□□ 1.83
CCDC47-202ENST00000403162 PARD3Q8TEW0 1356 aa26.49■■□□□ 1.83
CCDC47-202ENST00000403162 ARHGAP31Q2M1Z3 1444 aa26.49■■□□□ 1.83
CCDC47-202ENST00000403162 LAMC1P11047 1609 aa26.48■■□□□ 1.83
CCDC47-202ENST00000403162 CFAP65Q6ZU64 1925 aaKnown RBP26.48■■□□□ 1.83
CCDC47-202ENST00000403162 RRP1P56182 461 aaKnown RBP26.46■■□□□ 1.83
CCDC47-202ENST00000403162 NLRP13Q86W25 1043 aa26.46■■□□□ 1.83
CCDC47-202ENST00000403162 ANP32AP39687 249 aaKnown RBP26.46■■□□□ 1.83
CCDC47-202ENST00000403162 GPRASP1Q5JY77 1395 aa26.45■■□□□ 1.82
CCDC47-202ENST00000403162 PDE3BQ13370 1112 aa26.44■■□□□ 1.82
CCDC47-202ENST00000403162 IPO9Q96P70 1041 aaKnown RBP26.43■■□□□ 1.82
CCDC47-202ENST00000403162 SENP3-EIF4A1A0A087X0R7 540 aa26.43■■□□□ 1.82
CCDC47-202ENST00000403162 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
CCDC47-202ENST00000403162 CLTCL1P53675 1640 aa26.42■■□□□ 1.82
CCDC47-202ENST00000403162 INSRP06213 1382 aa26.41■■□□□ 1.82
CCDC47-202ENST00000403162 NOS1P29475 1434 aa26.41■■□□□ 1.82
CCDC47-202ENST00000403162 UGGT1Q9NYU2 1555 aa26.41■■□□□ 1.82
CCDC47-202ENST00000403162 FBXO31Q5XUX0 539 aaPredicted RBP26.4■■□□□ 1.82
CCDC47-202ENST00000403162 ZMYM3Q14202 1370 aa26.4■■□□□ 1.82
CCDC47-202ENST00000403162 RCAN3Q9UKA8 241 aa26.4■■□□□ 1.82
CCDC47-202ENST00000403162 RGL3Q3MIN7 710 aa26.39■■□□□ 1.81
CCDC47-202ENST00000403162 PER1O15534 1290 aaPredicted RBP26.38■■□□□ 1.81
CCDC47-202ENST00000403162 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
CCDC47-202ENST00000403162 SYNMO15061 1565 aa26.36■■□□□ 1.81
CCDC47-202ENST00000403162 DEKP35659 375 aaKnown RBP26.36■■□□□ 1.81
CCDC47-202ENST00000403162 ERVK-7P63135 1459 aa26.35■■□□□ 1.81
CCDC47-202ENST00000403162 FER1L4A9Z1Z3 1794 aa26.35■■□□□ 1.81
CCDC47-202ENST00000403162 EXOC6Q8TAG9 804 aa26.34■■□□□ 1.81
CCDC47-202ENST00000403162 BLMP54132 1417 aaPredicted RBP26.32■■□□□ 1.8
CCDC47-202ENST00000403162 TCERG1O14776 1098 aaKnown RBP26.32■■□□□ 1.8
CCDC47-202ENST00000403162 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
CCDC47-202ENST00000403162 CHGAP10645 457 aaKnown RBP26.31■■□□□ 1.8
CCDC47-202ENST00000403162 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
CCDC47-202ENST00000403162 ZBTB47Q9UFB7 747 aaPredicted RBP26.3■■□□□ 1.8
CCDC47-202ENST00000403162 TESK2Q96S53 571 aa26.29■■□□□ 1.8
CCDC47-202ENST00000403162 SLC52A1Q9NWF4 448 aa26.29■■□□□ 1.8
CCDC47-202ENST00000403162 SPATA31D1Q6ZQQ2 1576 aa26.29■■□□□ 1.8
CCDC47-202ENST00000403162 KIF1BO60333 1816 aa26.29■■□□□ 1.8
CCDC47-202ENST00000403162 IDI1Q13907 227 aa26.29■■□□□ 1.8
CCDC47-202ENST00000403162 DISP3Q9P2K9 1392 aa26.28■■□□□ 1.8
CCDC47-202ENST00000403162 PIK3C2BO00750 1634 aa26.28■■□□□ 1.8
CCDC47-202ENST00000403162 CEBPAP49715 358 aaPredicted RBP26.28■■□□□ 1.8
CCDC47-202ENST00000403162 PLPPR3Q6T4P5 718 aa26.27■■□□□ 1.8
CCDC47-202ENST00000403162 MADDQ8WXG6 1647 aa26.27■■□□□ 1.8
CCDC47-202ENST00000403162 NBR1Q14596 966 aa26.26■■□□□ 1.79
CCDC47-202ENST00000403162 MS4A1P11836 297 aa26.24■■□□□ 1.79
CCDC47-202ENST00000403162 ADAMTSL3P82987 1691 aa26.23■■□□□ 1.79
CCDC47-202ENST00000403162 C3P01024 1663 aa26.23■■□□□ 1.79
CCDC47-202ENST00000403162 NEURL4Q96JN8 1562 aa26.23■■□□□ 1.79
CCDC47-202ENST00000403162 SALL2Q9Y467 1007 aaPredicted RBP26.23■■□□□ 1.79
CCDC47-202ENST00000403162 ADGRB3O60242 1522 aa26.23■■□□□ 1.79
CCDC47-202ENST00000403162 RIMS1Q86UR5 1692 aaKnown RBP26.22■■□□□ 1.79
CCDC47-202ENST00000403162 TNRQ92752 1358 aa26.22■■□□□ 1.79
CCDC47-202ENST00000403162 CDCA7LQ96GN5 454 aa26.2■■□□□ 1.79
CCDC47-202ENST00000403162 TMF1P82094 1093 aa26.19■■□□□ 1.78
CCDC47-202ENST00000403162 PANK3Q9H999 370 aa26.19■■□□□ 1.78
CCDC47-202ENST00000403162 PDE4AP27815 886 aa26.18■■□□□ 1.78
CCDC47-202ENST00000403162 CC2D1BQ5T0F9 858 aaKnown RBP26.18■■□□□ 1.78
CCDC47-202ENST00000403162 STAG3Q9UJ98 1225 aa26.17■■□□□ 1.78
CCDC47-202ENST00000403162 BACH2Q9BYV9 841 aa26.17■■□□□ 1.78
CCDC47-202ENST00000403162 TMEM131LA2VDJ0 1609 aa26.14■■□□□ 1.78
CCDC47-202ENST00000403162 RTL5Q5HYW3 569 aaPredicted RBP26.13■■□□□ 1.77
CCDC47-202ENST00000403162 STAC3Q96MF2 364 aa26.12■■□□□ 1.77
CCDC47-202ENST00000403162 RPGRIP1LQ68CZ1 1315 aa26.11■■□□□ 1.77
CCDC47-202ENST00000403162 MYO5BQ9ULV0 1848 aa26.11■■□□□ 1.77
CCDC47-202ENST00000403162 IQGAP1P46940 1657 aa26.11■■□□□ 1.77
CCDC47-202ENST00000403162 IFT172Q9UG01 1749 aa26.09■■□□□ 1.77
CCDC47-202ENST00000403162 A2ML1A8K2U0 1454 aa26.07■■□□□ 1.76
CCDC47-202ENST00000403162 MYOM2P54296 1465 aa26.07■■□□□ 1.76
CCDC47-202ENST00000403162 NLRP1Q9C000 1473 aa26.07■■□□□ 1.76
CCDC47-202ENST00000403162 PLIN1O60240 522 aa26.07■■□□□ 1.76
CCDC47-202ENST00000403162 NUTM2DQ5VT03 806 aaPredicted RBP26.07■■□□□ 1.76
CCDC47-202ENST00000403162 NPM2Q86SE8 214 aaKnown RBP26.07■■□□□ 1.76
CCDC47-202ENST00000403162 CRBNQ96SW2 442 aa26.07■■□□□ 1.76
CCDC47-202ENST00000403162 ADGRF5Q8IZF2 1346 aa26.07■■□□□ 1.76
CCDC47-202ENST00000403162 PPLO60437 1756 aa26.06■■□□□ 1.76
CCDC47-202ENST00000403162 NEXMIFQ5QGS0 1516 aa26.05■■□□□ 1.76
CCDC47-202ENST00000403162 PTPRMP28827 1452 aa26.04■■□□□ 1.76
CCDC47-202ENST00000403162 VGFO15240 615 aaPredicted RBP26.02■■□□□ 1.76
CCDC47-202ENST00000403162 ADAMTS8Q9UP79 889 aa26.02■■□□□ 1.76
CCDC47-202ENST00000403162 UBR1Q8IWV7 1749 aa26■■□□□ 1.75
CCDC47-202ENST00000403162 MYO3AQ8NEV4 1616 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms