RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CDC42BPBQ9Y5S2 1711 aa10.03□□□□□ -0.8
HDAC9-201ENST00000401921 KCNA4P22459 653 aa10.03□□□□□ -0.8
HDAC9-201ENST00000401921 STAG3Q9UJ98 1225 aa10.03□□□□□ -0.8
HDAC9-201ENST00000401921 RRP7AQ9Y3A4 280 aaKnown RBP10.03□□□□□ -0.8
HDAC9-201ENST00000401921 DUOX2Q9NRD8 1548 aa10.03□□□□□ -0.8
HDAC9-201ENST00000401921 ADGRF5Q8IZF2 1346 aa10.02□□□□□ -0.8
HDAC9-201ENST00000401921 C20orf194Q5TEA3 1177 aa10.02□□□□□ -0.8
HDAC9-201ENST00000401921 CHD1O14646 1710 aa10.02□□□□□ -0.81
HDAC9-201ENST00000401921 ABCC2Q92887 1545 aa10.02□□□□□ -0.81
HDAC9-201ENST00000401921 PREX2Q70Z35 1606 aa10.02□□□□□ -0.81
HDAC9-201ENST00000401921 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
HDAC9-201ENST00000401921 KDM5DQ9BY66 1539 aa10.01□□□□□ -0.81
HDAC9-201ENST00000401921 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
HDAC9-201ENST00000401921 SLC12A5Q9H2X9 1139 aa10□□□□□ -0.81
HDAC9-201ENST00000401921 COL17A1Q9UMD9 1497 aaPredicted RBP10□□□□□ -0.81
HDAC9-201ENST00000401921 POLR1AO95602 1720 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-201ENST00000401921 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-201ENST00000401921 GPRASP1Q5JY77 1395 aa9.99□□□□□ -0.81
HDAC9-201ENST00000401921 STAC3Q96MF2 364 aa9.99□□□□□ -0.81
HDAC9-201ENST00000401921 CENPJQ9HC77 1338 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-201ENST00000401921 FANCAO15360 1455 aa9.98□□□□□ -0.81
HDAC9-201ENST00000401921 MYO5CQ9NQX4 1742 aa9.98□□□□□ -0.81
HDAC9-201ENST00000401921 U2SURPO15042 1029 aaKnown RBP9.98□□□□□ -0.81
HDAC9-201ENST00000401921 SRPK2P78362 688 aaKnown RBP9.98□□□□□ -0.81
HDAC9-201ENST00000401921 CFAP53Q96M91 514 aa9.98□□□□□ -0.81
HDAC9-201ENST00000401921 BCAR3O75815 825 aa9.97□□□□□ -0.81
HDAC9-201ENST00000401921 RAPGEF3O95398 923 aa9.97□□□□□ -0.81
HDAC9-201ENST00000401921 BCL2L13Q9BXK5 485 aa9.97□□□□□ -0.81
HDAC9-201ENST00000401921 ADGRL1O94910 1474 aa9.97□□□□□ -0.81
HDAC9-201ENST00000401921 PPM1GO15355 546 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-201ENST00000401921 U2AF1L5P0DN76 240 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-201ENST00000401921 U2AF1Q01081 240 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDAC9-201ENST00000401921 SLC4A3P48751 1232 aa9.97□□□□□ -0.81
HDAC9-201ENST00000401921 IL27Q8NEV9 243 aa9.97□□□□□ -0.81
HDAC9-201ENST00000401921 POGKQ9P215 609 aa9.97□□□□□ -0.81
HDAC9-201ENST00000401921 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.81
HDAC9-201ENST00000401921 CFAP65Q6ZU64 1925 aaKnown RBP9.96□□□□□ -0.81
HDAC9-201ENST00000401921 NEFMP07197 916 aa9.96□□□□□ -0.81
HDAC9-201ENST00000401921 DUSP27Q5VZP5 1158 aa9.96□□□□□ -0.81
HDAC9-201ENST00000401921 OSCARQ8IYS5 282 aa9.96□□□□□ -0.81
HDAC9-201ENST00000401921 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
HDAC9-201ENST00000401921 TRPM1Q7Z4N2 1603 aa9.95□□□□□ -0.82
HDAC9-201ENST00000401921 BACH2Q9BYV9 841 aa9.95□□□□□ -0.82
HDAC9-201ENST00000401921 PLEKHH1Q9ULM0 1364 aa9.95□□□□□ -0.82
HDAC9-201ENST00000401921 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
HDAC9-201ENST00000401921 MAST1Q9Y2H9 1570 aa9.95□□□□□ -0.82
HDAC9-201ENST00000401921 E9PSI1 815 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 MLECQ14165 292 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 MTHFSP49914 203 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 SLFN5Q08AF3 891 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 CABP2Q9NPB3 220 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 MAGI2Q86UL8 1455 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 MS4A1P11836 297 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-201ENST00000401921 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
HDAC9-201ENST00000401921 EIF2AK4Q9P2K8 1649 aaKnown RBP9.93□□□□□ -0.82
HDAC9-201ENST00000401921 PANK1Q8TE04 598 aa9.93□□□□□ -0.82
HDAC9-201ENST00000401921 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
HDAC9-201ENST00000401921 SPINK5Q9NQ38 1064 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-201ENST00000401921 ZCCHC11Q5TAX3 1644 aaKnown RBP9.92□□□□□ -0.82
HDAC9-201ENST00000401921 ATP10AO60312 1499 aa9.92□□□□□ -0.82
HDAC9-201ENST00000401921 NOS1P29475 1434 aa9.92□□□□□ -0.82
HDAC9-201ENST00000401921 MINK1Q8N4C8 1332 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-201ENST00000401921 VGFO15240 615 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-201ENST00000401921 WDR7Q9Y4E6 1490 aa9.92□□□□□ -0.82
HDAC9-201ENST00000401921 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
HDAC9-201ENST00000401921 CGNL1Q0VF96 1302 aa9.91□□□□□ -0.82
HDAC9-201ENST00000401921 PRDM15P57071 1507 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-201ENST00000401921 ASXL2Q76L83 1435 aa9.91□□□□□ -0.82
HDAC9-201ENST00000401921 IQGAP3Q86VI3 1631 aa9.91□□□□□ -0.82
HDAC9-201ENST00000401921 UNC13BO14795 1591 aa9.91□□□□□ -0.82
HDAC9-201ENST00000401921 CYB5RLQ6IPT4 315 aa9.91□□□□□ -0.82
HDAC9-201ENST00000401921 EVC2Q86UK5 1308 aa9.91□□□□□ -0.82
HDAC9-201ENST00000401921 ABCC1P33527 1531 aa9.9□□□□□ -0.82
HDAC9-201ENST00000401921 GGNBP2Q9H3C7 697 aa9.9□□□□□ -0.82
HDAC9-201ENST00000401921 RTEL1-TNFRSF6BF6WH68 1400 aa9.9□□□□□ -0.82
HDAC9-201ENST00000401921 MAPK8IP3Q9UPT6 1336 aa9.9□□□□□ -0.82
HDAC9-201ENST00000401921 FTSJ3Q8IY81 847 aaKnown RBP9.9□□□□□ -0.82
HDAC9-201ENST00000401921 UGGT1Q9NYU2 1555 aa9.9□□□□□ -0.82
HDAC9-201ENST00000401921 PLEKHG5O94827 1062 aa9.9□□□□□ -0.83
HDAC9-201ENST00000401921 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.83
HDAC9-201ENST00000401921 ASXL1Q8IXJ9 1541 aa9.89□□□□□ -0.83
HDAC9-201ENST00000401921 PLXNC1O60486 1568 aa9.89□□□□□ -0.83
HDAC9-201ENST00000401921 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
HDAC9-201ENST00000401921 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
HDAC9-201ENST00000401921 RUNDC1Q96C34 613 aa9.89□□□□□ -0.83
HDAC9-201ENST00000401921 DMRT2Q9Y5R5 561 aa9.89□□□□□ -0.83
HDAC9-201ENST00000401921 ESF1Q9H501 851 aaKnown RBP9.89□□□□□ -0.83
HDAC9-201ENST00000401921 ATP7AQ04656 1500 aa9.89□□□□□ -0.83
HDAC9-201ENST00000401921 FAM161AQ3B820 660 aa9.88□□□□□ -0.83
HDAC9-201ENST00000401921 BLMP54132 1417 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-201ENST00000401921 PODXL2Q9NZ53 605 aa9.88□□□□□ -0.83
HDAC9-201ENST00000401921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC9-201ENST00000401921 C14orf93Q9H972 538 aaKnown RBP9.87□□□□□ -0.83
HDAC9-201ENST00000401921 IDI1Q13907 227 aa9.87□□□□□ -0.83
HDAC9-201ENST00000401921 UPF2Q9HAU5 1272 aaKnown RBP9.87□□□□□ -0.83
HDAC9-201ENST00000401921 ZMYM4Q5VZL5 1548 aa9.86□□□□□ -0.83
HDAC9-201ENST00000401921 MYH16Q9H6N6 1097 aa9.85□□□□□ -0.83
HDAC9-201ENST00000401921 SMC4Q9NTJ3 1288 aa9.85□□□□□ -0.83
HDAC9-201ENST00000401921 UHRF1BP1LA0JNW5 1464 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms