RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 IGF1RP08069 1367 aa5.54□□□□□ -1.52
CLHC1-201ENST00000401408 SIGLEC1Q9BZZ2 1709 aa5.54□□□□□ -1.52
CLHC1-201ENST00000401408 HSPA2P54652 639 aa5.54□□□□□ -1.52
CLHC1-201ENST00000401408 CCDC27Q2M243 656 aa5.54□□□□□ -1.52
CLHC1-201ENST00000401408 CARMIL2Q6F5E8 1435 aa5.53□□□□□ -1.52
CLHC1-201ENST00000401408 PRDM16Q9HAZ2 1276 aa5.53□□□□□ -1.52
CLHC1-201ENST00000401408 GPBP1L1Q9HC44 474 aaPredicted RBP5.53□□□□□ -1.52
CLHC1-201ENST00000401408 IQGAP2Q13576 1575 aa5.52□□□□□ -1.52
CLHC1-201ENST00000401408 ZNF316A6NFI3 1004 aaPredicted RBP5.52□□□□□ -1.53
CLHC1-201ENST00000401408 HS6ST3Q8IZP7 471 aa5.52□□□□□ -1.53
CLHC1-201ENST00000401408 SEC24BO95487 1268 aa5.52□□□□□ -1.53
CLHC1-201ENST00000401408 TTC37Q6PGP7 1564 aa5.52□□□□□ -1.53
CLHC1-201ENST00000401408 PHLDB1Q86UU1 1377 aa5.52□□□□□ -1.53
CLHC1-201ENST00000401408 UGGT2Q9NYU1 1516 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 SNPHO15079 494 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 KDM4AO75164 1064 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 MYT1LQ9UL68 1186 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 ARHGEF40Q8TER5 1519 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 PREX1Q8TCU6 1659 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 FAM205CA6NFA0 338 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 YEATS2Q9ULM3 1422 aa5.51□□□□□ -1.53
CLHC1-201ENST00000401408 NCLP19338 710 aaKnown RBP5.5□□□□□ -1.53
CLHC1-201ENST00000401408 ABCA9Q8IUA7 1624 aa5.5□□□□□ -1.53
CLHC1-201ENST00000401408 KCNV2Q8TDN2 545 aa5.5□□□□□ -1.53
CLHC1-201ENST00000401408 KIAA0556O60303 1618 aa5.49□□□□□ -1.53
CLHC1-201ENST00000401408 RICTORQ6R327 1708 aa5.49□□□□□ -1.53
CLHC1-201ENST00000401408 ABCA8O94911 1581 aa5.49□□□□□ -1.53
CLHC1-201ENST00000401408 SETD1BQ9UPS6 1966 aaKnown RBP5.49□□□□□ -1.53
CLHC1-201ENST00000401408 GTPBP6O43824 516 aaPredicted RBP5.49□□□□□ -1.53
CLHC1-201ENST00000401408 TRAK2O60296 914 aa5.49□□□□□ -1.53
CLHC1-201ENST00000401408 TEX2Q8IWB9 1127 aa5.49□□□□□ -1.53
CLHC1-201ENST00000401408 RETREG2Q8NC44 543 aa5.49□□□□□ -1.53
CLHC1-201ENST00000401408 PTPRTO14522 1441 aa5.49□□□□□ -1.53
CLHC1-201ENST00000401408 IRF5Q13568 498 aa5.48□□□□□ -1.53
CLHC1-201ENST00000401408 NKX1-1Q15270 411 aaPredicted RBP5.48□□□□□ -1.53
CLHC1-201ENST00000401408 NEO1Q92859 1461 aa5.48□□□□□ -1.53
CLHC1-201ENST00000401408 FLIIQ13045 1269 aa5.48□□□□□ -1.53
CLHC1-201ENST00000401408 FER1L4A9Z1Z3 1794 aa5.47□□□□□ -1.53
CLHC1-201ENST00000401408 MED1Q15648 1581 aaPredicted RBP5.47□□□□□ -1.53
CLHC1-201ENST00000401408 BARGINQ6ZT62 677 aa5.47□□□□□ -1.53
CLHC1-201ENST00000401408 CANXP27824 592 aaKnown RBP5.47□□□□□ -1.53
CLHC1-201ENST00000401408 CLUAP1Q96AJ1 413 aa5.47□□□□□ -1.53
CLHC1-201ENST00000401408 ZMYM4Q5VZL5 1548 aa5.47□□□□□ -1.53
CLHC1-201ENST00000401408 SETQ01105 290 aaPredicted RBP5.46□□□□□ -1.54
CLHC1-201ENST00000401408 PLCD4Q9BRC7 762 aa5.46□□□□□ -1.54
CLHC1-201ENST00000401408 BMP2KQ9NSY1 1161 aaPredicted RBP5.46□□□□□ -1.54
CLHC1-201ENST00000401408 ARHGEF12Q9NZN5 1544 aa5.46□□□□□ -1.54
CLHC1-201ENST00000401408 ZMYND10O75800 440 aa5.46□□□□□ -1.54
CLHC1-201ENST00000401408 RAPGEF3O95398 923 aa5.46□□□□□ -1.54
CLHC1-201ENST00000401408 AAMPQ13685 434 aa5.46□□□□□ -1.54
CLHC1-201ENST00000401408 PRDM10Q9NQV6 1147 aa5.46□□□□□ -1.54
CLHC1-201ENST00000401408 AMOTL2Q9Y2J4 779 aa5.46□□□□□ -1.54
CLHC1-201ENST00000401408 FHOD3Q2V2M9 1422 aa5.45□□□□□ -1.54
CLHC1-201ENST00000401408 SMARCA5O60264 1052 aaPredicted RBP5.45□□□□□ -1.54
CLHC1-201ENST00000401408 PTMSP20962 102 aa5.45□□□□□ -1.54
CLHC1-201ENST00000401408 KDM4CQ9H3R0 1056 aa5.45□□□□□ -1.54
CLHC1-201ENST00000401408 CARMIL1Q5VZK9 1371 aa5.45□□□□□ -1.54
CLHC1-201ENST00000401408 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
CLHC1-201ENST00000401408 A6NJR5 290 aa5.44□□□□□ -1.54
CLHC1-201ENST00000401408 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
CLHC1-201ENST00000401408 KIF27Q86VH2 1401 aa5.44□□□□□ -1.54
CLHC1-201ENST00000401408 CREBZFQ9NS37 354 aa5.44□□□□□ -1.54
CLHC1-201ENST00000401408 PLA2G2EQ9NZK7 142 aa5.44□□□□□ -1.54
CLHC1-201ENST00000401408 ANKRD13AQ8IZ07 590 aa5.43□□□□□ -1.54
CLHC1-201ENST00000401408 CCDC97Q96F63 343 aaPredicted RBP5.43□□□□□ -1.54
CLHC1-201ENST00000401408 FANCAO15360 1455 aa5.43□□□□□ -1.54
CLHC1-201ENST00000401408 NOL8Q76FK4 1167 aaKnown RBP5.43□□□□□ -1.54
CLHC1-201ENST00000401408 ZNF777Q9ULD5 760 aaPredicted RBP5.43□□□□□ -1.54
CLHC1-201ENST00000401408 ATP10BO94823 1461 aa5.42□□□□□ -1.54
CLHC1-201ENST00000401408 KCNH8Q96L42 1107 aa5.42□□□□□ -1.54
CLHC1-201ENST00000401408 SERPINA10Q9UK55 444 aa5.42□□□□□ -1.54
CLHC1-201ENST00000401408 POGZQ7Z3K3 1410 aa5.41□□□□□ -1.54
CLHC1-201ENST00000401408 MAGI2Q86UL8 1455 aa5.41□□□□□ -1.54
CLHC1-201ENST00000401408 LOC102724159A0A0B4J2E5 919 aa5.41□□□□□ -1.54
CLHC1-201ENST00000401408 ANAPC15P60006 121 aa5.41□□□□□ -1.54
CLHC1-201ENST00000401408 PWP2Q15269 919 aaKnown RBP5.41□□□□□ -1.54
CLHC1-201ENST00000401408 EXOC8Q8IYI6 725 aa5.41□□□□□ -1.54
CLHC1-201ENST00000401408 SPATA32Q96LK8 384 aa5.41□□□□□ -1.54
CLHC1-201ENST00000401408 NCOA1Q15788 1441 aa5.4□□□□□ -1.54
CLHC1-201ENST00000401408 MAFGO15525 162 aa5.4□□□□□ -1.54
CLHC1-201ENST00000401408 CIZ1Q9ULV3 898 aaPredicted RBP5.4□□□□□ -1.54
CLHC1-201ENST00000401408 EFCAB5A4FU69 1503 aa5.4□□□□□ -1.55
CLHC1-201ENST00000401408 AKNAQ7Z591 1439 aa5.4□□□□□ -1.55
CLHC1-201ENST00000401408 CNPY4Q8N129 248 aa5.4□□□□□ -1.55
CLHC1-201ENST00000401408 RIPOR2Q9Y4F9 1068 aa5.4□□□□□ -1.55
CLHC1-201ENST00000401408 C3P01024 1663 aa5.4□□□□□ -1.55
CLHC1-201ENST00000401408 ALKQ9UM73 1620 aa5.4□□□□□ -1.55
CLHC1-201ENST00000401408 ZFYVE16Q7Z3T8 1539 aa5.39□□□□□ -1.55
CLHC1-201ENST00000401408 DENND4BO75064 1496 aaPredicted RBP5.39□□□□□ -1.55
CLHC1-201ENST00000401408 PLEKHD1A6NEE1 506 aa5.39□□□□□ -1.55
CLHC1-201ENST00000401408 UNCXA6NJT0 531 aa5.39□□□□□ -1.55
CLHC1-201ENST00000401408 HSP90AB4PQ58FF6 505 aa5.39□□□□□ -1.55
CLHC1-201ENST00000401408 AK7Q96M32 723 aa5.39□□□□□ -1.55
CLHC1-201ENST00000401408 TRPC6Q9Y210 931 aa5.39□□□□□ -1.55
CLHC1-201ENST00000401408 UHRF1BP1Q6BDS2 1440 aa5.38□□□□□ -1.55
CLHC1-201ENST00000401408 CTTNBP2Q8WZ74 1663 aa5.38□□□□□ -1.55
CLHC1-201ENST00000401408 HECW1Q76N89 1606 aa5.38□□□□□ -1.55
CLHC1-201ENST00000401408 CENPBP07199 599 aaPredicted RBP5.38□□□□□ -1.55
CLHC1-201ENST00000401408 IRX2Q9BZI1 471 aaPredicted RBP5.38□□□□□ -1.55
CLHC1-201ENST00000401408 ANO8Q9HCE9 1232 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms