RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TPM3P06753 285 aa13.49□□□□□ -0.25
CACNA1C-216ENST00000399638 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
CACNA1C-216ENST00000399638 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-216ENST00000399638 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
CACNA1C-216ENST00000399638 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-216ENST00000399638 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-216ENST00000399638 LRRFIP1Q32MZ4 808 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-216ENST00000399638 H3BQV1 296 aa13.48□□□□□ -0.25
CACNA1C-216ENST00000399638 ODF2Q5BJF6 829 aa13.48□□□□□ -0.25
CACNA1C-216ENST00000399638 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
CACNA1C-216ENST00000399638 IPO9Q96P70 1041 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-216ENST00000399638 CHMP4BP1P59074 171 aa13.47□□□□□ -0.25
CACNA1C-216ENST00000399638 ERICH2A1L162 156 aa13.47□□□□□ -0.25
CACNA1C-216ENST00000399638 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-216ENST00000399638 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CACNA1C-216ENST00000399638 NUP155O75694 1391 aa13.47□□□□□ -0.25
CACNA1C-216ENST00000399638 KIF21BO75037 1637 aa13.47□□□□□ -0.25
CACNA1C-216ENST00000399638 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
CACNA1C-216ENST00000399638 TRIM29Q14134 588 aa13.46□□□□□ -0.25
CACNA1C-216ENST00000399638 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.26
CACNA1C-216ENST00000399638 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.26
CACNA1C-216ENST00000399638 RILPL2Q969X0 211 aa13.46□□□□□ -0.26
CACNA1C-216ENST00000399638 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
CACNA1C-216ENST00000399638 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-216ENST00000399638 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-216ENST00000399638 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-216ENST00000399638 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
CACNA1C-216ENST00000399638 ZFYVE27Q5T4F4 411 aa13.45□□□□□ -0.26
CACNA1C-216ENST00000399638 CT47A1Q5JQC4 288 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-216ENST00000399638 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
CACNA1C-216ENST00000399638 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
CACNA1C-216ENST00000399638 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-216ENST00000399638 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
CACNA1C-216ENST00000399638 WIZO95785 1651 aa13.44□□□□□ -0.26
CACNA1C-216ENST00000399638 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
CACNA1C-216ENST00000399638 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-216ENST00000399638 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
CACNA1C-216ENST00000399638 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-216ENST00000399638 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-216ENST00000399638 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNA1C-216ENST00000399638 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
CACNA1C-216ENST00000399638 ANKRD30AQ9BXX3 1397 aa13.41□□□□□ -0.26
CACNA1C-216ENST00000399638 TRDNQ13061 729 aa13.4□□□□□ -0.26
CACNA1C-216ENST00000399638 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
CACNA1C-216ENST00000399638 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-216ENST00000399638 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 CSPP1Q1MSJ5 1256 aa13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-216ENST00000399638 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-216ENST00000399638 CA8P35219 290 aa13.38□□□□□ -0.27
CACNA1C-216ENST00000399638 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-216ENST00000399638 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
CACNA1C-216ENST00000399638 FOXD4L6Q3SYB3 417 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-216ENST00000399638 FOXD4L3Q6VB84 417 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-216ENST00000399638 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
CACNA1C-216ENST00000399638 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
CACNA1C-216ENST00000399638 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
CACNA1C-216ENST00000399638 KDM4AO75164 1064 aa13.37□□□□□ -0.27
CACNA1C-216ENST00000399638 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
CACNA1C-216ENST00000399638 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
CACNA1C-216ENST00000399638 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
CACNA1C-216ENST00000399638 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
CACNA1C-216ENST00000399638 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
CACNA1C-216ENST00000399638 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-216ENST00000399638 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-216ENST00000399638 BCCIPQ9P287 314 aaKnown RBP eCLIP13.36□□□□□ -0.27
CACNA1C-216ENST00000399638 RRP7AQ9Y3A4 280 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-216ENST00000399638 CPLX1O14810 134 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 EPS15P42566 896 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 TPM1P09493 284 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
CACNA1C-216ENST00000399638 G3BP1Q13283 466 aaKnown RBP eCLIP13.34□□□□□ -0.27
CACNA1C-216ENST00000399638 EVC2Q86UK5 1308 aa13.34□□□□□ -0.27
CACNA1C-216ENST00000399638 FOSBP53539 338 aa13.34□□□□□ -0.27
CACNA1C-216ENST00000399638 ADAMTS2O95450 1211 aa13.34□□□□□ -0.27
CACNA1C-216ENST00000399638 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-216ENST00000399638 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
CACNA1C-216ENST00000399638 SMARCA4P51532 1647 aa13.33□□□□□ -0.27
CACNA1C-216ENST00000399638 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
CACNA1C-216ENST00000399638 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-216ENST00000399638 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
CACNA1C-216ENST00000399638 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CACNA1C-216ENST00000399638 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNA1C-216ENST00000399638 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
CACNA1C-216ENST00000399638 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
CACNA1C-216ENST00000399638 CHMP4CQ96CF2 233 aa13.3□□□□□ -0.28
CACNA1C-216ENST00000399638 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
CACNA1C-216ENST00000399638 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms