RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
CACNA1C-206ENST00000399595 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
CACNA1C-206ENST00000399595 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-206ENST00000399595 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
CACNA1C-206ENST00000399595 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-206ENST00000399595 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
CACNA1C-206ENST00000399595 FAM43AQ8N2R8 423 aa13.67□□□□□ -0.22
CACNA1C-206ENST00000399595 HSP90B2PQ58FF3 399 aa13.67□□□□□ -0.22
CACNA1C-206ENST00000399595 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-206ENST00000399595 KIF3AQ9Y496 699 aa13.66□□□□□ -0.22
CACNA1C-206ENST00000399595 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-206ENST00000399595 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
CACNA1C-206ENST00000399595 NACADO15069 1562 aa13.66□□□□□ -0.22
CACNA1C-206ENST00000399595 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
CACNA1C-206ENST00000399595 ST18O60284 1047 aa13.65□□□□□ -0.22
CACNA1C-206ENST00000399595 NEFHP12036 1026 aa13.65□□□□□ -0.22
CACNA1C-206ENST00000399595 MTMR7Q9Y216 660 aa13.64□□□□□ -0.23
CACNA1C-206ENST00000399595 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-206ENST00000399595 TEFQ10587 303 aa13.64□□□□□ -0.23
CACNA1C-206ENST00000399595 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
CACNA1C-206ENST00000399595 CUX2O14529 1486 aa13.64□□□□□ -0.23
CACNA1C-206ENST00000399595 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-206ENST00000399595 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
CACNA1C-206ENST00000399595 LEKR1Q6ZMV7 388 aa13.63□□□□□ -0.23
CACNA1C-206ENST00000399595 TSPYL1Q9H0U9 437 aa13.63□□□□□ -0.23
CACNA1C-206ENST00000399595 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
CACNA1C-206ENST00000399595 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-206ENST00000399595 STRN4Q9NRL3 753 aa13.62□□□□□ -0.23
CACNA1C-206ENST00000399595 PROSER2Q86WR7 435 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-206ENST00000399595 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
CACNA1C-206ENST00000399595 MTERF4Q7Z6M4 381 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-206ENST00000399595 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
CACNA1C-206ENST00000399595 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-206ENST00000399595 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-206ENST00000399595 IPO7O95373 1038 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-206ENST00000399595 SEPT11Q9NVA2 429 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-206ENST00000399595 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-206ENST00000399595 HMGN5P82970 282 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 RBM10P98175 930 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 DYDC1Q8WWB3 177 aa13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 PKD2Q13563 968 aa13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 COG3Q96JB2 828 aa13.6□□□□□ -0.23
CACNA1C-206ENST00000399595 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-206ENST00000399595 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-206ENST00000399595 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
CACNA1C-206ENST00000399595 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.23
CACNA1C-206ENST00000399595 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.24
CACNA1C-206ENST00000399595 SOGA1O94964 1423 aa13.58□□□□□ -0.24
CACNA1C-206ENST00000399595 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
CACNA1C-206ENST00000399595 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-206ENST00000399595 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
CACNA1C-206ENST00000399595 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.24
CACNA1C-206ENST00000399595 IKQ13123 557 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-206ENST00000399595 ERCC4Q92889 916 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-206ENST00000399595 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
CACNA1C-206ENST00000399595 FYB1O15117 783 aa13.57□□□□□ -0.24
CACNA1C-206ENST00000399595 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
CACNA1C-206ENST00000399595 EPS15P42566 896 aa13.56□□□□□ -0.24
CACNA1C-206ENST00000399595 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
CACNA1C-206ENST00000399595 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
CACNA1C-206ENST00000399595 C16orf71Q8IYS4 520 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-206ENST00000399595 NF2P35240 595 aa13.56□□□□□ -0.24
CACNA1C-206ENST00000399595 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 PDILTQ8N807 584 aa13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 PSMD1Q99460 953 aa13.55□□□□□ -0.24
CACNA1C-206ENST00000399595 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
CACNA1C-206ENST00000399595 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
CACNA1C-206ENST00000399595 GIMAP7Q8NHV1 300 aa13.54□□□□□ -0.24
CACNA1C-206ENST00000399595 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-206ENST00000399595 KIAA0754O94854 1291 aa13.54□□□□□ -0.24
CACNA1C-206ENST00000399595 ATP6V1DQ9Y5K8 247 aa13.54□□□□□ -0.24
CACNA1C-206ENST00000399595 TAF3Q5VWG9 929 aa13.53□□□□□ -0.24
CACNA1C-206ENST00000399595 NUP155O75694 1391 aa13.53□□□□□ -0.24
CACNA1C-206ENST00000399595 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
CACNA1C-206ENST00000399595 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-206ENST00000399595 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
CACNA1C-206ENST00000399595 CEP164Q9UPV0 1460 aa13.53□□□□□ -0.24
CACNA1C-206ENST00000399595 AXDND1Q5T1B0 1012 aaPredicted RBP13.52□□□□□ -0.24
CACNA1C-206ENST00000399595 INCENPQ9NQS7 918 aa13.52□□□□□ -0.24
CACNA1C-206ENST00000399595 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
CACNA1C-206ENST00000399595 SEPT7Q16181 437 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-206ENST00000399595 CCDC27Q2M243 656 aa13.52□□□□□ -0.25
CACNA1C-206ENST00000399595 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
CACNA1C-206ENST00000399595 ESCO1Q5FWF5 840 aa13.51□□□□□ -0.25
CACNA1C-206ENST00000399595 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-206ENST00000399595 SMC4Q9NTJ3 1288 aa13.51□□□□□ -0.25
CACNA1C-206ENST00000399595 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
CACNA1C-206ENST00000399595 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
CACNA1C-206ENST00000399595 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
CACNA1C-206ENST00000399595 EEA1Q15075 1411 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms