RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 SASS6Q6UVJ0 657 aa19.65■□□□□ 0.74
ITSN1-209ENST00000399352 FRAT2O75474 233 aaPredicted RBP19.65■□□□□ 0.74
ITSN1-209ENST00000399352 NOM1Q5C9Z4 860 aaKnown RBP19.65■□□□□ 0.74
ITSN1-209ENST00000399352 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.74
ITSN1-209ENST00000399352 MAP7D2Q96T17 732 aa19.64■□□□□ 0.73
ITSN1-209ENST00000399352 AMPHP49418 695 aa19.63■□□□□ 0.73
ITSN1-209ENST00000399352 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
ITSN1-209ENST00000399352 CHMP4CQ96CF2 233 aa19.62■□□□□ 0.73
ITSN1-209ENST00000399352 TRAK1Q9UPV9 953 aa19.62■□□□□ 0.73
ITSN1-209ENST00000399352 DZIP1LQ8IYY4 767 aaKnown RBP19.62■□□□□ 0.73
ITSN1-209ENST00000399352 SMC3Q9UQE7 1217 aa19.62■□□□□ 0.73
ITSN1-209ENST00000399352 TRAK2O60296 914 aa19.62■□□□□ 0.73
ITSN1-209ENST00000399352 HSP90B2PQ58FF3 399 aa19.62■□□□□ 0.73
ITSN1-209ENST00000399352 MTERF4Q7Z6M4 381 aaKnown RBP19.62■□□□□ 0.73
ITSN1-209ENST00000399352 LNPKQ9C0E8 428 aa19.62■□□□□ 0.73
ITSN1-209ENST00000399352 RUFY1Q96T51 708 aa19.61■□□□□ 0.73
ITSN1-209ENST00000399352 RUFY2Q8WXA3 655 aa19.61■□□□□ 0.73
ITSN1-209ENST00000399352 FOSBP53539 338 aa19.6■□□□□ 0.73
ITSN1-209ENST00000399352 CPLX2Q6PUV4 134 aaKnown RBP19.6■□□□□ 0.73
ITSN1-209ENST00000399352 ANKRD20A12PQ8NF67 263 aa19.6■□□□□ 0.73
ITSN1-209ENST00000399352 FBXO3Q9UK99 471 aa19.6■□□□□ 0.73
ITSN1-209ENST00000399352 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
ITSN1-209ENST00000399352 SYNE3Q6ZMZ3 975 aa19.59■□□□□ 0.73
ITSN1-209ENST00000399352 CPLX1O14810 134 aa19.59■□□□□ 0.73
ITSN1-209ENST00000399352 TRIM29Q14134 588 aa19.59■□□□□ 0.73
ITSN1-209ENST00000399352 RRP12Q5JTH9 1297 aaKnown RBP19.58■□□□□ 0.73
ITSN1-209ENST00000399352 AK7Q96M32 723 aa19.58■□□□□ 0.72
ITSN1-209ENST00000399352 CAVIN1Q6NZI2 390 aaKnown RBP19.58■□□□□ 0.72
ITSN1-209ENST00000399352 ACBD3Q9H3P7 528 aa19.58■□□□□ 0.72
ITSN1-209ENST00000399352 INTS3Q68E01 1043 aaKnown RBP19.57■□□□□ 0.72
ITSN1-209ENST00000399352 NGDNQ8NEJ9 315 aaKnown RBP19.57■□□□□ 0.72
ITSN1-209ENST00000399352 CCDC73Q6ZRK6 1079 aa19.56■□□□□ 0.72
ITSN1-209ENST00000399352 KIF3BO15066 747 aa19.56■□□□□ 0.72
ITSN1-209ENST00000399352 CCDC66A2RUB6 948 aa19.55■□□□□ 0.72
ITSN1-209ENST00000399352 H0YHG0 523 aa19.55■□□□□ 0.72
ITSN1-209ENST00000399352 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.72
ITSN1-209ENST00000399352 IFIT2P09913 472 aaKnown RBP19.54■□□□□ 0.72
ITSN1-209ENST00000399352 PANK1Q8TE04 598 aa19.54■□□□□ 0.72
ITSN1-209ENST00000399352 NECTIN2Q92692 538 aa19.54■□□□□ 0.72
ITSN1-209ENST00000399352 USP47Q96K76 1375 aa19.53■□□□□ 0.72
ITSN1-209ENST00000399352 NAP1L1P55209 391 aaKnown RBP19.53■□□□□ 0.72
ITSN1-209ENST00000399352 TMX4Q9H1E5 349 aaPredicted RBP19.53■□□□□ 0.72
ITSN1-209ENST00000399352 HOOK1Q9UJC3 728 aaKnown RBP19.53■□□□□ 0.72
ITSN1-209ENST00000399352 CWC15Q9P013 229 aaKnown RBP19.53■□□□□ 0.72
ITSN1-209ENST00000399352 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
ITSN1-209ENST00000399352 APPP05067 770 aa19.52■□□□□ 0.72
ITSN1-209ENST00000399352 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.71
ITSN1-209ENST00000399352 PDILTQ8N807 584 aa19.52■□□□□ 0.71
ITSN1-209ENST00000399352 RNF20Q5VTR2 975 aa19.51■□□□□ 0.71
ITSN1-209ENST00000399352 C9orf78Q9NZ63 289 aaPredicted RBP19.51■□□□□ 0.71
ITSN1-209ENST00000399352 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
ITSN1-209ENST00000399352 CCDC47Q96A33 483 aaKnown RBP19.51■□□□□ 0.71
ITSN1-209ENST00000399352 TRIM5Q9C035 493 aa19.51■□□□□ 0.71
ITSN1-209ENST00000399352 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
ITSN1-209ENST00000399352 G3V3G9 751 aa19.51■□□□□ 0.71
ITSN1-209ENST00000399352 CDR1P51861 262 aa19.51■□□□□ 0.71
ITSN1-209ENST00000399352 DCAF8Q5TAQ9 597 aa19.51■□□□□ 0.71
ITSN1-209ENST00000399352 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
ITSN1-209ENST00000399352 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
ITSN1-209ENST00000399352 TTLL5Q6EMB2 1281 aa19.5■□□□□ 0.71
ITSN1-209ENST00000399352 PRPF40AO75400 957 aaKnown RBP19.48■□□□□ 0.71
ITSN1-209ENST00000399352 RIPK4P57078 832 aa19.48■□□□□ 0.71
ITSN1-209ENST00000399352 CCDC27Q2M243 656 aa19.48■□□□□ 0.71
ITSN1-209ENST00000399352 EFCAB2Q5VUJ9 269 aa19.48■□□□□ 0.71
ITSN1-209ENST00000399352 MPNDQ8N594 471 aa19.48■□□□□ 0.71
ITSN1-209ENST00000399352 CCDC173Q0VFZ6 552 aa19.47■□□□□ 0.71
ITSN1-209ENST00000399352 SDF4Q9BRK5 362 aa19.47■□□□□ 0.71
ITSN1-209ENST00000399352 CDC45O75419 566 aa19.46■□□□□ 0.71
ITSN1-209ENST00000399352 HMGN5P82970 282 aaKnown RBP19.46■□□□□ 0.71
ITSN1-209ENST00000399352 LRRFIP1Q32MZ4 808 aaKnown RBP19.46■□□□□ 0.71
ITSN1-209ENST00000399352 NFXL1Q6ZNB6 911 aa19.46■□□□□ 0.71
ITSN1-209ENST00000399352 TSPY26PQ9H489 355 aa19.46■□□□□ 0.71
ITSN1-209ENST00000399352 SKIDA1Q1XH10 827 aa19.46■□□□□ 0.71
ITSN1-209ENST00000399352 CAGE1Q8TC20 777 aa19.46■□□□□ 0.71
ITSN1-209ENST00000399352 RDXP35241 583 aaKnown RBP19.45■□□□□ 0.7
ITSN1-209ENST00000399352 TRDNQ13061 729 aa19.45■□□□□ 0.7
ITSN1-209ENST00000399352 RAD21O60216 631 aa19.45■□□□□ 0.7
ITSN1-209ENST00000399352 SPC24Q8NBT2 197 aa19.45■□□□□ 0.7
ITSN1-209ENST00000399352 NAT10Q9H0A0 1025 aaKnown RBP19.45■□□□□ 0.7
ITSN1-209ENST00000399352 PRKCSHP14314 528 aaPredicted RBP19.45■□□□□ 0.7
ITSN1-209ENST00000399352 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
ITSN1-209ENST00000399352 NEXNQ0ZGT2 675 aa19.44■□□□□ 0.7
ITSN1-209ENST00000399352 TEFQ10587 303 aa19.44■□□□□ 0.7
ITSN1-209ENST00000399352 CCDC191Q8NCU4 936 aa19.44■□□□□ 0.7
ITSN1-209ENST00000399352 COG3Q96JB2 828 aa19.44■□□□□ 0.7
ITSN1-209ENST00000399352 PODXL2Q9NZ53 605 aa19.44■□□□□ 0.7
ITSN1-209ENST00000399352 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
ITSN1-209ENST00000399352 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
ITSN1-209ENST00000399352 MBD3O95983 291 aa19.43■□□□□ 0.7
ITSN1-209ENST00000399352 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.43■□□□□ 0.7
ITSN1-209ENST00000399352 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
ITSN1-209ENST00000399352 OLFM4Q6UX06 510 aa19.42■□□□□ 0.7
ITSN1-209ENST00000399352 SMC2O95347 1197 aa19.42■□□□□ 0.7
ITSN1-209ENST00000399352 TSPYL1Q9H0U9 437 aa19.42■□□□□ 0.7
ITSN1-209ENST00000399352 G3BP1Q13283 466 aaKnown RBP eCLIP19.42■□□□□ 0.7
ITSN1-209ENST00000399352 DHX16O60231 1041 aaKnown RBP19.41■□□□□ 0.7
ITSN1-209ENST00000399352 DIAPH1O60610 1272 aaKnown RBP19.41■□□□□ 0.7
ITSN1-209ENST00000399352 ERCC4Q92889 916 aaPredicted RBP19.41■□□□□ 0.7
ITSN1-209ENST00000399352 LEKR1Q6ZMV7 388 aa19.41■□□□□ 0.7
ITSN1-209ENST00000399352 C1orf141Q5JVX7 400 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms