RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 KDM5AP29375 1690 aaKnown RBP12.04□□□□□ -0.48
GIN1-201ENST00000399004 BRD4O60885 1362 aaPredicted RBP12.04□□□□□ -0.48
GIN1-201ENST00000399004 PPP4R2Q9NY27 417 aa12.04□□□□□ -0.48
GIN1-201ENST00000399004 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
GIN1-201ENST00000399004 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
GIN1-201ENST00000399004 NOP58Q9Y2X3 529 aaKnown RBP12.03□□□□□ -0.48
GIN1-201ENST00000399004 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
GIN1-201ENST00000399004 FANCAO15360 1455 aa12.03□□□□□ -0.48
GIN1-201ENST00000399004 RICTORQ6R327 1708 aa12.02□□□□□ -0.48
GIN1-201ENST00000399004 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.49
GIN1-201ENST00000399004 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
GIN1-201ENST00000399004 SIGLEC1Q9BZZ2 1709 aa12□□□□□ -0.49
GIN1-201ENST00000399004 CAMSAP1Q5T5Y3 1602 aa12□□□□□ -0.49
GIN1-201ENST00000399004 GLI2P10070 1586 aa12□□□□□ -0.49
GIN1-201ENST00000399004 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
GIN1-201ENST00000399004 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
GIN1-201ENST00000399004 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
GIN1-201ENST00000399004 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
GIN1-201ENST00000399004 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
GIN1-201ENST00000399004 TSPY4P0CV99 314 aa11.98□□□□□ -0.49
GIN1-201ENST00000399004 TSPY10P0CW01 314 aa11.98□□□□□ -0.49
GIN1-201ENST00000399004 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
GIN1-201ENST00000399004 FANCIQ9NVI1 1328 aa11.97□□□□□ -0.49
GIN1-201ENST00000399004 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
GIN1-201ENST00000399004 ZBTB47Q9UFB7 747 aaPredicted RBP11.97□□□□□ -0.49
GIN1-201ENST00000399004 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
GIN1-201ENST00000399004 SHPRHQ149N8 1683 aa11.97□□□□□ -0.49
GIN1-201ENST00000399004 HNRNPMP52272 730 aaKnown RBP eCLIP11.96□□□□□ -0.49
GIN1-201ENST00000399004 TESK2Q96S53 571 aa11.96□□□□□ -0.49
GIN1-201ENST00000399004 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
GIN1-201ENST00000399004 ADGRB1O14514 1584 aa11.95□□□□□ -0.5
GIN1-201ENST00000399004 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
GIN1-201ENST00000399004 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
GIN1-201ENST00000399004 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
GIN1-201ENST00000399004 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
GIN1-201ENST00000399004 RALBP1Q15311 655 aa11.94□□□□□ -0.5
GIN1-201ENST00000399004 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
GIN1-201ENST00000399004 ZNF777Q9ULD5 760 aaPredicted RBP11.93□□□□□ -0.5
GIN1-201ENST00000399004 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
GIN1-201ENST00000399004 EIF5BO60841 1220 aaKnown RBP11.92□□□□□ -0.5
GIN1-201ENST00000399004 MYBBP1AQ9BQG0 1328 aaKnown RBP11.92□□□□□ -0.5
GIN1-201ENST00000399004 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
GIN1-201ENST00000399004 VIRMAQ69YN4 1812 aaKnown RBP11.91□□□□□ -0.5
GIN1-201ENST00000399004 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
GIN1-201ENST00000399004 NEO1Q92859 1461 aa11.91□□□□□ -0.5
GIN1-201ENST00000399004 ARXQ96QS3 562 aa11.91□□□□□ -0.5
GIN1-201ENST00000399004 SETD1AO15047 1707 aaKnown RBP11.91□□□□□ -0.5
GIN1-201ENST00000399004 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
GIN1-201ENST00000399004 PIK3C2GO75747 1445 aa11.9□□□□□ -0.5
GIN1-201ENST00000399004 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
GIN1-201ENST00000399004 DISP3Q9P2K9 1392 aa11.9□□□□□ -0.5
GIN1-201ENST00000399004 ABCC3O15438 1527 aa11.9□□□□□ -0.51
GIN1-201ENST00000399004 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.51
GIN1-201ENST00000399004 TMC1Q8TDI8 760 aa11.9□□□□□ -0.51
GIN1-201ENST00000399004 ASXL1Q8IXJ9 1541 aa11.89□□□□□ -0.51
GIN1-201ENST00000399004 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
GIN1-201ENST00000399004 NEFMP07197 916 aa11.89□□□□□ -0.51
GIN1-201ENST00000399004 ARHGAP31Q2M1Z3 1444 aa11.89□□□□□ -0.51
GIN1-201ENST00000399004 ASXL2Q76L83 1435 aa11.89□□□□□ -0.51
GIN1-201ENST00000399004 EFCAB2Q5VUJ9 269 aa11.88□□□□□ -0.51
GIN1-201ENST00000399004 NEXMIFQ5QGS0 1516 aa11.88□□□□□ -0.51
GIN1-201ENST00000399004 ERVK-7P63135 1459 aa11.87□□□□□ -0.51
GIN1-201ENST00000399004 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
GIN1-201ENST00000399004 NOS1P29475 1434 aa11.86□□□□□ -0.51
GIN1-201ENST00000399004 PLIN1O60240 522 aa11.86□□□□□ -0.51
GIN1-201ENST00000399004 FBLN2P98095 1184 aa11.85□□□□□ -0.51
GIN1-201ENST00000399004 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
GIN1-201ENST00000399004 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
GIN1-201ENST00000399004 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
GIN1-201ENST00000399004 ZFYVE9O95405 1425 aa11.85□□□□□ -0.51
GIN1-201ENST00000399004 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
GIN1-201ENST00000399004 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
GIN1-201ENST00000399004 TMEM131LA2VDJ0 1609 aa11.84□□□□□ -0.51
GIN1-201ENST00000399004 EXOC6Q8TAG9 804 aa11.83□□□□□ -0.52
GIN1-201ENST00000399004 IPO9Q96P70 1041 aaKnown RBP11.83□□□□□ -0.52
GIN1-201ENST00000399004 ADGRB2O60241 1585 aa11.83□□□□□ -0.52
GIN1-201ENST00000399004 MYO5BQ9ULV0 1848 aa11.82□□□□□ -0.52
GIN1-201ENST00000399004 PDE3BQ13370 1112 aa11.82□□□□□ -0.52
GIN1-201ENST00000399004 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
GIN1-201ENST00000399004 DCAF11Q8TEB1 546 aa11.81□□□□□ -0.52
GIN1-201ENST00000399004 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
GIN1-201ENST00000399004 ZNF521Q96K83 1311 aa11.8□□□□□ -0.52
GIN1-201ENST00000399004 NLRP13Q86W25 1043 aa11.8□□□□□ -0.52
GIN1-201ENST00000399004 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
GIN1-201ENST00000399004 AGLP35573 1532 aa11.79□□□□□ -0.52
GIN1-201ENST00000399004 SPAG9O60271 1321 aaKnown RBP11.78□□□□□ -0.52
GIN1-201ENST00000399004 CDC42BPGQ6DT37 1551 aa11.78□□□□□ -0.52
GIN1-201ENST00000399004 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
GIN1-201ENST00000399004 NPATQ14207 1427 aa11.78□□□□□ -0.52
GIN1-201ENST00000399004 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.52
GIN1-201ENST00000399004 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.53
GIN1-201ENST00000399004 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
GIN1-201ENST00000399004 CC2D1BQ5T0F9 858 aaKnown RBP11.77□□□□□ -0.53
GIN1-201ENST00000399004 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
GIN1-201ENST00000399004 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
GIN1-201ENST00000399004 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
GIN1-201ENST00000399004 KANK1Q14678 1352 aa11.76□□□□□ -0.53
GIN1-201ENST00000399004 MED14O60244 1454 aa11.76□□□□□ -0.53
GIN1-201ENST00000399004 CDCA7LQ96GN5 454 aa11.75□□□□□ -0.53
GIN1-201ENST00000399004 DIP2BQ9P265 1576 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms