RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
CSGALNACT1-202ENST00000397998 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
CSGALNACT1-202ENST00000397998 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
CSGALNACT1-202ENST00000397998 PER1O15534 1290 aaPredicted RBP13.98□□□□□ -0.17
CSGALNACT1-202ENST00000397998 RALGAPBQ86X10 1494 aa13.98□□□□□ -0.17
CSGALNACT1-202ENST00000397998 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
CSGALNACT1-202ENST00000397998 KIAA0586Q9BVV6 1533 aa13.98□□□□□ -0.17
CSGALNACT1-202ENST00000397998 PZPP20742 1482 aa13.98□□□□□ -0.17
CSGALNACT1-202ENST00000397998 IGHDP01880 384 aa13.98□□□□□ -0.17
CSGALNACT1-202ENST00000397998 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
CSGALNACT1-202ENST00000397998 PTMAP06454 111 aaKnown RBP13.97□□□□□ -0.17
CSGALNACT1-202ENST00000397998 DDX11L8A8MPP1 907 aa13.97□□□□□ -0.17
CSGALNACT1-202ENST00000397998 HSP90AA2PQ14568 343 aaPredicted RBP13.96□□□□□ -0.17
CSGALNACT1-202ENST00000397998 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
CSGALNACT1-202ENST00000397998 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.17
CSGALNACT1-202ENST00000397998 MTHFSP49914 203 aa13.96□□□□□ -0.18
CSGALNACT1-202ENST00000397998 TRAK2O60296 914 aa13.95□□□□□ -0.18
CSGALNACT1-202ENST00000397998 LNPKQ9C0E8 428 aa13.95□□□□□ -0.18
CSGALNACT1-202ENST00000397998 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
CSGALNACT1-202ENST00000397998 ANKRD45Q5TZF3 282 aa13.94□□□□□ -0.18
CSGALNACT1-202ENST00000397998 CHMP4BQ9H444 224 aaKnown RBP13.94□□□□□ -0.18
CSGALNACT1-202ENST00000397998 WWC1Q8IX03 1113 aa13.94□□□□□ -0.18
CSGALNACT1-202ENST00000397998 DNTTIP2Q5QJE6 756 aaKnown RBP13.94□□□□□ -0.18
CSGALNACT1-202ENST00000397998 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
CSGALNACT1-202ENST00000397998 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
CSGALNACT1-202ENST00000397998 TESK2Q96S53 571 aa13.93□□□□□ -0.18
CSGALNACT1-202ENST00000397998 ZBTB7CA1YPR0 619 aa13.93□□□□□ -0.18
CSGALNACT1-202ENST00000397998 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
CSGALNACT1-202ENST00000397998 PLEKHH1Q9ULM0 1364 aa13.93□□□□□ -0.18
CSGALNACT1-202ENST00000397998 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
CSGALNACT1-202ENST00000397998 ARID3AQ99856 593 aa13.92□□□□□ -0.18
CSGALNACT1-202ENST00000397998 SLC12A5Q9H2X9 1139 aa13.92□□□□□ -0.18
CSGALNACT1-202ENST00000397998 DDX19BQ9UMR2 479 aa13.92□□□□□ -0.18
CSGALNACT1-202ENST00000397998 TSR2Q969E8 191 aaKnown RBP13.92□□□□□ -0.18
CSGALNACT1-202ENST00000397998 DENND4BO75064 1496 aaPredicted RBP13.91□□□□□ -0.18
CSGALNACT1-202ENST00000397998 KDM5BQ9UGL1 1544 aa13.91□□□□□ -0.18
CSGALNACT1-202ENST00000397998 TMEM132EQ6IEE7 984 aa13.91□□□□□ -0.18
CSGALNACT1-202ENST00000397998 DDX49Q9Y6V7 483 aaKnown RBP13.91□□□□□ -0.18
CSGALNACT1-202ENST00000397998 MCM4P33991 863 aa13.9□□□□□ -0.18
CSGALNACT1-202ENST00000397998 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
CSGALNACT1-202ENST00000397998 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
CSGALNACT1-202ENST00000397998 SEC24BO95487 1268 aa13.9□□□□□ -0.19
CSGALNACT1-202ENST00000397998 MRE11P49959 708 aa13.9□□□□□ -0.19
CSGALNACT1-202ENST00000397998 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.19
CSGALNACT1-202ENST00000397998 NKTRP30414 1462 aaKnown RBP13.89□□□□□ -0.19
CSGALNACT1-202ENST00000397998 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
CSGALNACT1-202ENST00000397998 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
CSGALNACT1-202ENST00000397998 EXOSC9Q06265 439 aaKnown RBP13.89□□□□□ -0.19
CSGALNACT1-202ENST00000397998 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
CSGALNACT1-202ENST00000397998 ARHGAP5Q13017 1502 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 RARSP54136 660 aaKnown RBP13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 AAMPQ13685 434 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 RIPK4P57078 832 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 GCC2Q8IWJ2 1684 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 WDR62O43379 1518 aa13.88□□□□□ -0.19
CSGALNACT1-202ENST00000397998 PRAG1Q86YV5 1406 aa13.87□□□□□ -0.19
CSGALNACT1-202ENST00000397998 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
CSGALNACT1-202ENST00000397998 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
CSGALNACT1-202ENST00000397998 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
CSGALNACT1-202ENST00000397998 PTMSP20962 102 aa13.87□□□□□ -0.19
CSGALNACT1-202ENST00000397998 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
CSGALNACT1-202ENST00000397998 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
CSGALNACT1-202ENST00000397998 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
CSGALNACT1-202ENST00000397998 HDGFL2Q7Z4V5 671 aaPredicted RBP13.86□□□□□ -0.19
CSGALNACT1-202ENST00000397998 UHRF1BP1Q6BDS2 1440 aa13.86□□□□□ -0.19
CSGALNACT1-202ENST00000397998 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
CSGALNACT1-202ENST00000397998 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
CSGALNACT1-202ENST00000397998 DNMT1P26358 1616 aaKnown RBP13.85□□□□□ -0.19
CSGALNACT1-202ENST00000397998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.85□□□□□ -0.194e-6■■■■□ 20.3
CSGALNACT1-202ENST00000397998 CCDC141Q6ZP82 1450 aa13.85□□□□□ -0.19
CSGALNACT1-202ENST00000397998 PCDHB15Q9Y5E8 787 aa13.85□□□□□ -0.19
CSGALNACT1-202ENST00000397998 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
CSGALNACT1-202ENST00000397998 SKOR2Q2VWA4 1001 aaPredicted RBP13.84□□□□□ -0.19
CSGALNACT1-202ENST00000397998 TERF2IPQ9NYB0 399 aa13.84□□□□□ -0.19
CSGALNACT1-202ENST00000397998 TNNQ9UQP3 1299 aa13.84□□□□□ -0.19
CSGALNACT1-202ENST00000397998 SOX12O15370 315 aa13.84□□□□□ -0.19
CSGALNACT1-202ENST00000397998 EVC2Q86UK5 1308 aa13.83□□□□□ -0.19
CSGALNACT1-202ENST00000397998 NOL8Q76FK4 1167 aaKnown RBP13.83□□□□□ -0.2
CSGALNACT1-202ENST00000397998 CABP2Q9NPB3 220 aa13.83□□□□□ -0.2
CSGALNACT1-202ENST00000397998 WDR63Q8IWG1 891 aa13.83□□□□□ -0.2
CSGALNACT1-202ENST00000397998 GRPEL1Q9HAV7 217 aa13.82□□□□□ -0.2
CSGALNACT1-202ENST00000397998 NOB1Q9ULX3 412 aaKnown RBP13.82□□□□□ -0.2
CSGALNACT1-202ENST00000397998 GRIN2AQ12879 1464 aa13.82□□□□□ -0.2
CSGALNACT1-202ENST00000397998 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
CSGALNACT1-202ENST00000397998 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
CSGALNACT1-202ENST00000397998 C1orf115Q9H7X2 142 aa13.81□□□□□ -0.2
CSGALNACT1-202ENST00000397998 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
CSGALNACT1-202ENST00000397998 MINK1Q8N4C8 1332 aaPredicted RBP13.81□□□□□ -0.2
CSGALNACT1-202ENST00000397998 PANK2Q9BZ23 570 aa13.81□□□□□ -0.2
CSGALNACT1-202ENST00000397998 KIF14Q15058 1648 aa13.81□□□□□ -0.2
CSGALNACT1-202ENST00000397998 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
CSGALNACT1-202ENST00000397998 RAPGEF6Q8TEU7 1601 aa13.8□□□□□ -0.2
CSGALNACT1-202ENST00000397998 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
CSGALNACT1-202ENST00000397998 KIF16BQ96L93 1317 aa13.8□□□□□ -0.2
CSGALNACT1-202ENST00000397998 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
CSGALNACT1-202ENST00000397998 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms