RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 RNF123Q5XPI4 1314 aa31.73■■■□□ 2.67
PABPN1-202ENST00000397276 RAPGEF3O95398 923 aa31.72■■■□□ 2.67
PABPN1-202ENST00000397276 CDCA8Q53HL2 280 aa31.72■■■□□ 2.67
PABPN1-202ENST00000397276 CDCA7LQ96GN5 454 aa31.72■■■□□ 2.67
PABPN1-202ENST00000397276 IQGAP1P46940 1657 aa31.71■■■□□ 2.67
PABPN1-202ENST00000397276 EFCAB6Q5THR3 1501 aa31.67■■■□□ 2.66
PABPN1-202ENST00000397276 EIF3AQ14152 1382 aaKnown RBP31.67■■■□□ 2.66
PABPN1-202ENST00000397276 CCDC136Q96JN2 1154 aa31.67■■■□□ 2.66
PABPN1-202ENST00000397276 AMER1Q5JTC6 1135 aaPredicted RBP31.67■■■□□ 2.66
PABPN1-202ENST00000397276 POGZQ7Z3K3 1410 aa31.65■■■□□ 2.66
PABPN1-202ENST00000397276 ADAMTS8Q9UP79 889 aa31.65■■■□□ 2.66
PABPN1-202ENST00000397276 PPRC1Q5VV67 1664 aaKnown RBP31.65■■■□□ 2.66
PABPN1-202ENST00000397276 PPP2R1AP30153 589 aa31.65■■■□□ 2.66
PABPN1-202ENST00000397276 RCAN3Q9UKA8 241 aa31.63■■■□□ 2.65
PABPN1-202ENST00000397276 CFAP65Q6ZU64 1925 aaKnown RBP31.62■■■□□ 2.65
PABPN1-202ENST00000397276 NOS1P29475 1434 aa31.6■■■□□ 2.65
PABPN1-202ENST00000397276 MAP3K4Q9Y6R4 1608 aa31.59■■■□□ 2.65
PABPN1-202ENST00000397276 NPATQ14207 1427 aa31.59■■■□□ 2.65
PABPN1-202ENST00000397276 NUTM2DQ5VT03 806 aaPredicted RBP31.59■■■□□ 2.65
PABPN1-202ENST00000397276 RRP1P56182 461 aaKnown RBP31.58■■■□□ 2.65
PABPN1-202ENST00000397276 TRAK1Q9UPV9 953 aa31.58■■■□□ 2.65
PABPN1-202ENST00000397276 PDE3BQ13370 1112 aa31.57■■■□□ 2.65
PABPN1-202ENST00000397276 KIF1BO60333 1816 aa31.57■■■□□ 2.64
PABPN1-202ENST00000397276 ABCA6Q8N139 1617 aa31.57■■■□□ 2.64
PABPN1-202ENST00000397276 WDR43Q15061 677 aaKnown RBP eCLIP31.56■■■□□ 2.644e-6■■■□□ 16.5
PABPN1-202ENST00000397276 SENP3Q9H4L4 574 aaPredicted RBP31.56■■■□□ 2.64
PABPN1-202ENST00000397276 MYOM2P54296 1465 aa31.55■■■□□ 2.64
PABPN1-202ENST00000397276 FRMPD1Q5SYB0 1578 aa31.55■■■□□ 2.64
PABPN1-202ENST00000397276 TMEM132EQ6IEE7 984 aa31.55■■■□□ 2.64
PABPN1-202ENST00000397276 MLH3Q9UHC1 1453 aa31.55■■■□□ 2.64
PABPN1-202ENST00000397276 MROH2AA6NES4 1674 aa31.55■■■□□ 2.64
PABPN1-202ENST00000397276 BLMP54132 1417 aaPredicted RBP31.53■■■□□ 2.64
PABPN1-202ENST00000397276 LMTK2Q8IWU2 1503 aa31.53■■■□□ 2.64
PABPN1-202ENST00000397276 PAK3O75914 559 aaPredicted RBP31.52■■■□□ 2.64
PABPN1-202ENST00000397276 DEKP35659 375 aaKnown RBP31.52■■■□□ 2.64
PABPN1-202ENST00000397276 EXOC6Q8TAG9 804 aa31.52■■■□□ 2.64
PABPN1-202ENST00000397276 SYNMO15061 1565 aa31.52■■■□□ 2.64
PABPN1-202ENST00000397276 HECW2Q9P2P5 1572 aa31.5■■■□□ 2.63
PABPN1-202ENST00000397276 ASXL1Q8IXJ9 1541 aa31.5■■■□□ 2.63
PABPN1-202ENST00000397276 ERVK-7P63135 1459 aa31.49■■■□□ 2.63
PABPN1-202ENST00000397276 NBR1Q14596 966 aa31.49■■■□□ 2.63
PABPN1-202ENST00000397276 NEURL4Q96JN8 1562 aa31.49■■■□□ 2.63
PABPN1-202ENST00000397276 CYB5RLQ6IPT4 315 aa31.49■■■□□ 2.63
PABPN1-202ENST00000397276 CARD14Q9BXL6 1004 aa31.49■■■□□ 2.63
PABPN1-202ENST00000397276 KIAA1210Q9ULL0 1709 aa31.48■■■□□ 2.63
PABPN1-202ENST00000397276 PLIN1O60240 522 aa31.48■■■□□ 2.63
PABPN1-202ENST00000397276 CFAP74Q9C0B2 1584 aa31.48■■■□□ 2.63
PABPN1-202ENST00000397276 CENPJQ9HC77 1338 aaPredicted RBP31.47■■■□□ 2.63
PABPN1-202ENST00000397276 MYOM1P52179 1685 aa31.45■■■□□ 2.62
PABPN1-202ENST00000397276 ADGRB3O60242 1522 aa31.44■■■□□ 2.62
PABPN1-202ENST00000397276 CCDC146Q8IYE0 955 aa31.44■■■□□ 2.62
PABPN1-202ENST00000397276 KDM5AP29375 1690 aaKnown RBP31.43■■■□□ 2.62
PABPN1-202ENST00000397276 SLC24A1O60721 1099 aa31.43■■■□□ 2.62
PABPN1-202ENST00000397276 C14orf93Q9H972 538 aaKnown RBP31.43■■■□□ 2.62
PABPN1-202ENST00000397276 NOP58Q9Y2X3 529 aaKnown RBP31.42■■■□□ 2.62
PABPN1-202ENST00000397276 NRXN1Q9ULB1 1477 aa31.42■■■□□ 2.62
PABPN1-202ENST00000397276 IFT172Q9UG01 1749 aa31.41■■■□□ 2.62
PABPN1-202ENST00000397276 ABCC3O15438 1527 aa31.4■■■□□ 2.62
PABPN1-202ENST00000397276 INSRP06213 1382 aa31.4■■■□□ 2.62
PABPN1-202ENST00000397276 PLEKHH1Q9ULM0 1364 aa31.38■■■□□ 2.61
PABPN1-202ENST00000397276 SLC12A5Q9H2X9 1139 aa31.38■■■□□ 2.61
PABPN1-202ENST00000397276 NEO1Q92859 1461 aa31.38■■■□□ 2.61
PABPN1-202ENST00000397276 PIK3C2GO75747 1445 aa31.37■■■□□ 2.61
PABPN1-202ENST00000397276 TNNT2P45379 298 aaPredicted RBP31.36■■■□□ 2.61
PABPN1-202ENST00000397276 ZMYM4Q5VZL5 1548 aa31.35■■■□□ 2.61
PABPN1-202ENST00000397276 NPC1L1Q9UHC9 1359 aa31.35■■■□□ 2.61
PABPN1-202ENST00000397276 YEATS2Q9ULM3 1422 aa31.34■■■□□ 2.61
PABPN1-202ENST00000397276 IDI1Q13907 227 aa31.34■■■□□ 2.61
PABPN1-202ENST00000397276 SAFB2Q14151 953 aaKnown RBP eCLIP31.33■■■□□ 2.61
PABPN1-202ENST00000397276 RPGRIP1LQ68CZ1 1315 aa31.32■■■□□ 2.6
PABPN1-202ENST00000397276 APAF1O14727 1248 aa31.3■■■□□ 2.6
PABPN1-202ENST00000397276 VGFO15240 615 aaPredicted RBP31.29■■■□□ 2.6
PABPN1-202ENST00000397276 DIP2CQ9Y2E4 1556 aa31.29■■■□□ 2.6
PABPN1-202ENST00000397276 SBNO2Q9Y2G9 1366 aa31.28■■■□□ 2.6
PABPN1-202ENST00000397276 GOLGA2Q08379 1002 aa31.28■■■□□ 2.6
PABPN1-202ENST00000397276 PPLO60437 1756 aa31.28■■■□□ 2.6
PABPN1-202ENST00000397276 DUSP27Q5VZP5 1158 aa31.28■■■□□ 2.6
PABPN1-202ENST00000397276 SIGLEC1Q9BZZ2 1709 aa31.27■■■□□ 2.6
PABPN1-202ENST00000397276 CAMSAP1Q5T5Y3 1602 aa31.27■■■□□ 2.6
PABPN1-202ENST00000397276 CRBNQ96SW2 442 aa31.26■■■□□ 2.6
PABPN1-202ENST00000397276 STK26Q9P289 416 aa31.26■■■□□ 2.6
PABPN1-202ENST00000397276 NSD3Q9BZ95 1437 aa31.26■■■□□ 2.59
PABPN1-202ENST00000397276 SETBP1Q9Y6X0 1596 aa31.25■■■□□ 2.59
PABPN1-202ENST00000397276 C20orf194Q5TEA3 1177 aa31.25■■■□□ 2.59
PABPN1-202ENST00000397276 FAM69CQ0P6D2 419 aa31.25■■■□□ 2.59
PABPN1-202ENST00000397276 MORC1Q86VD1 984 aa31.25■■■□□ 2.59
PABPN1-202ENST00000397276 ADGRB1O14514 1584 aa31.25■■■□□ 2.59
PABPN1-202ENST00000397276 ZNF521Q96K83 1311 aa31.23■■■□□ 2.59
PABPN1-202ENST00000397276 MYO3AQ8NEV4 1616 aa31.21■■■□□ 2.59
PABPN1-202ENST00000397276 SPINK5Q9NQ38 1064 aaPredicted RBP31.21■■■□□ 2.59
PABPN1-202ENST00000397276 FBXO31Q5XUX0 539 aaPredicted RBP31.2■■■□□ 2.59
PABPN1-202ENST00000397276 CABP2Q9NPB3 220 aa31.19■■■□□ 2.58
PABPN1-202ENST00000397276 QRICH2Q9H0J4 1663 aa31.17■■■□□ 2.58
PABPN1-202ENST00000397276 RICTORQ6R327 1708 aa31.17■■■□□ 2.58
PABPN1-202ENST00000397276 SLFN5Q08AF3 891 aa31.17■■■□□ 2.58
PABPN1-202ENST00000397276 SLC52A1Q9NWF4 448 aa31.16■■■□□ 2.58
PABPN1-202ENST00000397276 IPO9Q96P70 1041 aaKnown RBP31.15■■■□□ 2.58
PABPN1-202ENST00000397276 EVC2Q86UK5 1308 aa31.15■■■□□ 2.58
PABPN1-202ENST00000397276 NEXMIFQ5QGS0 1516 aa31.14■■■□□ 2.58
PABPN1-202ENST00000397276 ANP32AP39687 249 aaKnown RBP31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms