RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 E9PSI1 815 aa10.92□□□□□ -0.66
NDE1-202ENST00000396355 SLC4A1APQ9BWU0 796 aaKnown RBP10.92□□□□□ -0.66
NDE1-202ENST00000396355 CHMP4AQ9BY43 222 aa10.92□□□□□ -0.66
NDE1-202ENST00000396355 BCORL1Q5H9F3 1711 aa10.91□□□□□ -0.66
NDE1-202ENST00000396355 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
NDE1-202ENST00000396355 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
NDE1-202ENST00000396355 ADGRL2O95490 1459 aa10.91□□□□□ -0.66
NDE1-202ENST00000396355 YEATS2Q9ULM3 1422 aa10.91□□□□□ -0.66
NDE1-202ENST00000396355 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
NDE1-202ENST00000396355 FRAT2O75474 233 aaPredicted RBP10.9□□□□□ -0.66
NDE1-202ENST00000396355 DHX37Q8IY37 1157 aaKnown RBP10.9□□□□□ -0.66
NDE1-202ENST00000396355 AEBP1Q8IUX7 1158 aa10.9□□□□□ -0.66
NDE1-202ENST00000396355 KIF7Q2M1P5 1343 aa10.9□□□□□ -0.67
NDE1-202ENST00000396355 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.67
NDE1-202ENST00000396355 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.67
NDE1-202ENST00000396355 TOM1O60784 492 aa10.89□□□□□ -0.67
NDE1-202ENST00000396355 KIF3BO15066 747 aa10.89□□□□□ -0.67
NDE1-202ENST00000396355 GOLGA6L3A6NEY3 463 aa10.89□□□□□ -0.67
NDE1-202ENST00000396355 SOCS7O14512 581 aa10.89□□□□□ -0.67
NDE1-202ENST00000396355 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
NDE1-202ENST00000396355 ABCA8O94911 1581 aa10.88□□□□□ -0.67
NDE1-202ENST00000396355 ARHGAP5Q13017 1502 aa10.88□□□□□ -0.67
NDE1-202ENST00000396355 ARAP3Q8WWN8 1544 aa10.88□□□□□ -0.67
NDE1-202ENST00000396355 MSNP26038 577 aaKnown RBP10.88□□□□□ -0.67
NDE1-202ENST00000396355 APPP05067 770 aa10.88□□□□□ -0.67
NDE1-202ENST00000396355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.671e-8■■□□□ 13.1
NDE1-202ENST00000396355 MYH16Q9H6N6 1097 aa10.87□□□□□ -0.67
NDE1-202ENST00000396355 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
NDE1-202ENST00000396355 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
NDE1-202ENST00000396355 KIAA1107Q9UPP5 1409 aa10.86□□□□□ -0.67
NDE1-202ENST00000396355 PDE4AP27815 886 aa10.86□□□□□ -0.67
NDE1-202ENST00000396355 ILDR2Q71H61 639 aa10.86□□□□□ -0.67
NDE1-202ENST00000396355 C14orf37Q86TY3 774 aa10.86□□□□□ -0.67
NDE1-202ENST00000396355 KDM5CP41229 1560 aa10.86□□□□□ -0.67
NDE1-202ENST00000396355 TNNT3P45378 269 aaPredicted RBP10.85□□□□□ -0.67
NDE1-202ENST00000396355 ATP10AO60312 1499 aa10.84□□□□□ -0.67
NDE1-202ENST00000396355 ANKRD50Q9ULJ7 1429 aa10.84□□□□□ -0.67
NDE1-202ENST00000396355 DHX29Q7Z478 1369 aaKnown RBP10.84□□□□□ -0.67
NDE1-202ENST00000396355 ZFYVE16Q7Z3T8 1539 aa10.84□□□□□ -0.67
NDE1-202ENST00000396355 PKD2Q13563 968 aa10.83□□□□□ -0.68
NDE1-202ENST00000396355 ZNF335Q9H4Z2 1342 aaPredicted RBP10.83□□□□□ -0.68
NDE1-202ENST00000396355 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
NDE1-202ENST00000396355 PLCH2O75038 1416 aa10.83□□□□□ -0.68
NDE1-202ENST00000396355 PTMAP06454 111 aaKnown RBP10.82□□□□□ -0.68
NDE1-202ENST00000396355 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
NDE1-202ENST00000396355 USP47Q96K76 1375 aa10.82□□□□□ -0.68
NDE1-202ENST00000396355 CHGAP10645 457 aaKnown RBP10.82□□□□□ -0.68
NDE1-202ENST00000396355 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
NDE1-202ENST00000396355 SHANK2Q9UPX8 1470 aa10.82□□□□□ -0.68
NDE1-202ENST00000396355 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
NDE1-202ENST00000396355 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
NDE1-202ENST00000396355 UPF2Q9HAU5 1272 aaKnown RBP10.81□□□□□ -0.68
NDE1-202ENST00000396355 MADDQ8WXG6 1647 aa10.81□□□□□ -0.68
NDE1-202ENST00000396355 BECN1Q14457 450 aa10.81□□□□□ -0.68
NDE1-202ENST00000396355 KDM5DQ9BY66 1539 aa10.8□□□□□ -0.68
NDE1-202ENST00000396355 PPRC1Q5VV67 1664 aaKnown RBP10.8□□□□□ -0.68
NDE1-202ENST00000396355 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
NDE1-202ENST00000396355 RIMS1Q86UR5 1692 aaKnown RBP10.8□□□□□ -0.68
NDE1-202ENST00000396355 R3HCC1Q9Y3T6 440 aaKnown RBP10.8□□□□□ -0.68
NDE1-202ENST00000396355 SAMD9LQ8IVG5 1584 aa10.79□□□□□ -0.68
NDE1-202ENST00000396355 RRAGDQ9NQL2 400 aaPredicted RBP10.79□□□□□ -0.68
NDE1-202ENST00000396355 ZBED9Q6R2W3 1325 aa10.79□□□□□ -0.68
NDE1-202ENST00000396355 RALGAPBQ86X10 1494 aa10.79□□□□□ -0.68
NDE1-202ENST00000396355 ZNF771Q7L3S4 317 aaPredicted RBP10.78□□□□□ -0.68
NDE1-202ENST00000396355 NUP155O75694 1391 aa10.78□□□□□ -0.68
NDE1-202ENST00000396355 ZNF518AQ6AHZ1 1483 aa10.77□□□□□ -0.68
NDE1-202ENST00000396355 KIAA1211Q6ZU35 1233 aa10.77□□□□□ -0.69
NDE1-202ENST00000396355 POGKQ9P215 609 aa10.77□□□□□ -0.69
NDE1-202ENST00000396355 EID1Q9Y6B2 187 aa10.77□□□□□ -0.69
NDE1-202ENST00000396355 ARHGEF5Q12774 1597 aa10.77□□□□□ -0.69
NDE1-202ENST00000396355 PREX2Q70Z35 1606 aa10.77□□□□□ -0.69
NDE1-202ENST00000396355 ZMYM3Q14202 1370 aa10.77□□□□□ -0.69
NDE1-202ENST00000396355 MAGI2Q86UL8 1455 aa10.77□□□□□ -0.69
NDE1-202ENST00000396355 KIF15Q9NS87 1388 aa10.76□□□□□ -0.69
NDE1-202ENST00000396355 FBXO31Q5XUX0 539 aaPredicted RBP10.76□□□□□ -0.69
NDE1-202ENST00000396355 ARHGEF12Q9NZN5 1544 aa10.76□□□□□ -0.69
NDE1-202ENST00000396355 E9PCH4 1651 aa10.76□□□□□ -0.69
NDE1-202ENST00000396355 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
NDE1-202ENST00000396355 HSPA1LP34931 641 aa10.76□□□□□ -0.69
NDE1-202ENST00000396355 PDCL3Q9H2J4 239 aa10.76□□□□□ -0.69
NDE1-202ENST00000396355 TRAPPC8Q9Y2L5 1435 aa10.75□□□□□ -0.69
NDE1-202ENST00000396355 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
NDE1-202ENST00000396355 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
NDE1-202ENST00000396355 TTC37Q6PGP7 1564 aa10.75□□□□□ -0.69
NDE1-202ENST00000396355 TMC1Q8TDI8 760 aa10.75□□□□□ -0.69
NDE1-202ENST00000396355 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
NDE1-202ENST00000396355 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
NDE1-202ENST00000396355 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
NDE1-202ENST00000396355 KDM2AQ9Y2K7 1162 aa10.74□□□□□ -0.69
NDE1-202ENST00000396355 MEX3CQ5U5Q3 659 aaKnown RBP10.73□□□□□ -0.69
NDE1-202ENST00000396355 CGNQ9P2M7 1197 aaKnown RBP10.73□□□□□ -0.69
NDE1-202ENST00000396355 SYCP2Q9BX26 1530 aa10.73□□□□□ -0.69
NDE1-202ENST00000396355 ABCA9Q8IUA7 1624 aa10.73□□□□□ -0.69
NDE1-202ENST00000396355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.73□□□□□ -0.69
NDE1-202ENST00000396355 CCDC141Q6ZP82 1450 aa10.72□□□□□ -0.69
NDE1-202ENST00000396355 TRPM1Q7Z4N2 1603 aa10.72□□□□□ -0.69
NDE1-202ENST00000396355 IGSF3O75054 1194 aa10.72□□□□□ -0.69
NDE1-202ENST00000396355 SKAP1Q86WV1 359 aa10.72□□□□□ -0.69
NDE1-202ENST00000396355 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
NDE1-202ENST00000396355 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms