RNA–Protein interactions for RNA: ENST00000396280.9

TRPM3-211, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,671 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-211ENST00000396280 CASC1Q6TDU7 716 aa11.96□□□□□ -0.49
TRPM3-211ENST00000396280 PANK1Q8TE04 598 aa11.96□□□□□ -0.49
TRPM3-211ENST00000396280 GOLGA6L3A6NEY3 463 aa11.96□□□□□ -0.49
TRPM3-211ENST00000396280 HDGFL2Q7Z4V5 671 aaPredicted RBP11.96□□□□□ -0.49
TRPM3-211ENST00000396280 GZF1Q9H116 711 aaPredicted RBP11.96□□□□□ -0.49
TRPM3-211ENST00000396280 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.5
TRPM3-211ENST00000396280 SLFN5Q08AF3 891 aa11.96□□□□□ -0.5
TRPM3-211ENST00000396280 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
TRPM3-211ENST00000396280 PARD3Q8TEW0 1356 aa11.95□□□□□ -0.5
TRPM3-211ENST00000396280 BCAR3O75815 825 aa11.95□□□□□ -0.5
TRPM3-211ENST00000396280 ITSN2Q9NZM3 1697 aa11.95□□□□□ -0.5
TRPM3-211ENST00000396280 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
TRPM3-211ENST00000396280 ADAMTS12P58397 1594 aa11.94□□□□□ -0.5
TRPM3-211ENST00000396280 GBP4Q96PP9 640 aa11.94□□□□□ -0.5
TRPM3-211ENST00000396280 TERF2IPQ9NYB0 399 aa11.94□□□□□ -0.5
TRPM3-211ENST00000396280 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
TRPM3-211ENST00000396280 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
TRPM3-211ENST00000396280 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
TRPM3-211ENST00000396280 IL27Q8NEV9 243 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 ARHGEF12Q9NZN5 1544 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 AFAP1Q8N556 730 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 EVC2Q86UK5 1308 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 SKAP1Q86WV1 359 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
TRPM3-211ENST00000396280 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
TRPM3-211ENST00000396280 PTMSP20962 102 aa11.92□□□□□ -0.5
TRPM3-211ENST00000396280 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
TRPM3-211ENST00000396280 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
TRPM3-211ENST00000396280 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
TRPM3-211ENST00000396280 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
TRPM3-211ENST00000396280 KDM6BO15054 1643 aa11.91□□□□□ -0.5
TRPM3-211ENST00000396280 NINLQ9Y2I6 1382 aa11.91□□□□□ -0.5
TRPM3-211ENST00000396280 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
TRPM3-211ENST00000396280 PRAG1Q86YV5 1406 aa11.9□□□□□ -0.5
TRPM3-211ENST00000396280 ADGRL2O95490 1459 aa11.9□□□□□ -0.5
TRPM3-211ENST00000396280 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
TRPM3-211ENST00000396280 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.51
TRPM3-211ENST00000396280 BRPF3Q9ULD4 1205 aa11.9□□□□□ -0.51
TRPM3-211ENST00000396280 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
TRPM3-211ENST00000396280 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
TRPM3-211ENST00000396280 DDX11L8A8MPP1 907 aa11.89□□□□□ -0.51
TRPM3-211ENST00000396280 MTHFSP49914 203 aa11.89□□□□□ -0.51
TRPM3-211ENST00000396280 CHMP5Q9NZZ3 219 aa11.89□□□□□ -0.51
TRPM3-211ENST00000396280 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
TRPM3-211ENST00000396280 DISP1Q96F81 1524 aa11.88□□□□□ -0.51
TRPM3-211ENST00000396280 ATP10BO94823 1461 aa11.88□□□□□ -0.51
TRPM3-211ENST00000396280 SHANK2Q9UPX8 1470 aa11.88□□□□□ -0.51
TRPM3-211ENST00000396280 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
TRPM3-211ENST00000396280 TESK2Q96S53 571 aa11.87□□□□□ -0.51
TRPM3-211ENST00000396280 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
TRPM3-211ENST00000396280 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
TRPM3-211ENST00000396280 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
TRPM3-211ENST00000396280 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
TRPM3-211ENST00000396280 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
TRPM3-211ENST00000396280 FAM135AQ9P2D6 1515 aa11.85□□□□□ -0.51
TRPM3-211ENST00000396280 NUP160Q12769 1436 aa11.85□□□□□ -0.51
TRPM3-211ENST00000396280 RIPK4P57078 832 aa11.84□□□□□ -0.51
TRPM3-211ENST00000396280 TMEM132EQ6IEE7 984 aa11.84□□□□□ -0.51
TRPM3-211ENST00000396280 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
TRPM3-211ENST00000396280 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
TRPM3-211ENST00000396280 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
TRPM3-211ENST00000396280 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
TRPM3-211ENST00000396280 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
TRPM3-211ENST00000396280 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
TRPM3-211ENST00000396280 PTMAP06454 111 aaKnown RBP11.83□□□□□ -0.52
TRPM3-211ENST00000396280 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.52
TRPM3-211ENST00000396280 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
TRPM3-211ENST00000396280 INSRP06213 1382 aa11.82□□□□□ -0.52
TRPM3-211ENST00000396280 MSNP26038 577 aaKnown RBP11.82□□□□□ -0.52
TRPM3-211ENST00000396280 SKOR2Q2VWA4 1001 aaPredicted RBP11.82□□□□□ -0.52
TRPM3-211ENST00000396280 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
TRPM3-211ENST00000396280 CT47B1P0C2W7 299 aaPredicted RBP11.81□□□□□ -0.52
TRPM3-211ENST00000396280 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
TRPM3-211ENST00000396280 COL17A1Q9UMD9 1497 aaPredicted RBP11.81□□□□□ -0.52
TRPM3-211ENST00000396280 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
TRPM3-211ENST00000396280 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
TRPM3-211ENST00000396280 APBB1O00213 710 aa11.8□□□□□ -0.52
TRPM3-211ENST00000396280 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
TRPM3-211ENST00000396280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRPM3-211ENST00000396280 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
TRPM3-211ENST00000396280 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
TRPM3-211ENST00000396280 MCCP23508 829 aa11.8□□□□□ -0.52
TRPM3-211ENST00000396280 RARSP54136 660 aaKnown RBP11.8□□□□□ -0.52
TRPM3-211ENST00000396280 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
TRPM3-211ENST00000396280 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
TRPM3-211ENST00000396280 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
TRPM3-211ENST00000396280 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
TRPM3-211ENST00000396280 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
TRPM3-211ENST00000396280 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
TRPM3-211ENST00000396280 KDM5CP41229 1560 aa11.79□□□□□ -0.52
TRPM3-211ENST00000396280 ADGBQ8N7X0 1667 aa11.79□□□□□ -0.52
TRPM3-211ENST00000396280 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
TRPM3-211ENST00000396280 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
TRPM3-211ENST00000396280 ASXL1Q8IXJ9 1541 aa11.78□□□□□ -0.52
TRPM3-211ENST00000396280 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
TRPM3-211ENST00000396280 EIF2AK4Q9P2K8 1649 aaKnown RBP11.78□□□□□ -0.52
TRPM3-211ENST00000396280 GPRASP1Q5JY77 1395 aa11.78□□□□□ -0.52
TRPM3-211ENST00000396280 IGHDP01880 384 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms