RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 ROCK2O75116 1388 aaKnown RBP33.15■■■□□ 2.9
LDHB-203ENST00000396076 TRPM1Q7Z4N2 1603 aa33.15■■■□□ 2.9
LDHB-203ENST00000396076 VGFO15240 615 aaPredicted RBP33.14■■■□□ 2.9
LDHB-203ENST00000396076 PPLO60437 1756 aa33.14■■■□□ 2.9
LDHB-203ENST00000396076 NBPF1Q3BBV0 1214 aa33.13■■■□□ 2.89
LDHB-203ENST00000396076 CARD11Q9BXL7 1154 aa33.13■■■□□ 2.89
LDHB-203ENST00000396076 HSPA5P11021 654 aaKnown RBP33.12■■■□□ 2.89
LDHB-203ENST00000396076 GPRASP1Q5JY77 1395 aa33.11■■■□□ 2.89
LDHB-203ENST00000396076 ZFYVE9O95405 1425 aa33.11■■■□□ 2.89
LDHB-203ENST00000396076 HIRIP3Q9BW71 556 aaPredicted RBP33.11■■■□□ 2.89
LDHB-203ENST00000396076 MYO5BQ9ULV0 1848 aa33.11■■■□□ 2.89
LDHB-203ENST00000396076 NUTM2DQ5VT03 806 aaPredicted RBP33.09■■■□□ 2.89
LDHB-203ENST00000396076 PIK3C2GO75747 1445 aa33.06■■■□□ 2.88
LDHB-203ENST00000396076 KDM5AP29375 1690 aaKnown RBP33.05■■■□□ 2.88
LDHB-203ENST00000396076 USP47Q96K76 1375 aa33.04■■■□□ 2.88
LDHB-203ENST00000396076 CFAP70Q5T0N1 1121 aa33.04■■■□□ 2.88
LDHB-203ENST00000396076 RIMS2Q9UQ26 1411 aa33.03■■■□□ 2.88
LDHB-203ENST00000396076 PTPRMP28827 1452 aa33.02■■■□□ 2.88
LDHB-203ENST00000396076 C14orf93Q9H972 538 aaKnown RBP33.02■■■□□ 2.88
LDHB-203ENST00000396076 UBR1Q8IWV7 1749 aa33.01■■■□□ 2.87
LDHB-203ENST00000396076 KIAA1210Q9ULL0 1709 aa33.01■■■□□ 2.87
LDHB-203ENST00000396076 ABCF1Q8NE71 845 aaKnown RBP eCLIP33■■■□□ 2.87
LDHB-203ENST00000396076 HDGFP51858 240 aaKnown RBP32.99■■■□□ 2.87
LDHB-203ENST00000396076 LAMC1P11047 1609 aa32.99■■■□□ 2.87
LDHB-203ENST00000396076 TMEM2Q9UHN6 1383 aa32.98■■■□□ 2.87
LDHB-203ENST00000396076 MYO3AQ8NEV4 1616 aa32.96■■■□□ 2.87
LDHB-203ENST00000396076 THEMISQ8N1K5 641 aaPredicted RBP32.94■■■□□ 2.86
LDHB-203ENST00000396076 ST20-MTHFSA0A0A6YYL1 179 aa32.9■■■□□ 2.86
LDHB-203ENST00000396076 CEP170BQ9Y4F5 1589 aaPredicted RBP32.89■■■□□ 2.86
LDHB-203ENST00000396076 SETBP1Q9Y6X0 1596 aa32.89■■■□□ 2.86
LDHB-203ENST00000396076 SCAF11Q99590 1463 aaKnown RBP32.88■■■□□ 2.85
LDHB-203ENST00000396076 SETD1BQ9UPS6 1966 aaKnown RBP32.87■■■□□ 2.85
LDHB-203ENST00000396076 KDM4FA0A1W2PPD8 638 aa32.87■■■□□ 2.85
LDHB-203ENST00000396076 ARHGAP23Q9P227 1491 aa32.86■■■□□ 2.85
LDHB-203ENST00000396076 SLIT1O75093 1534 aa32.86■■■□□ 2.85
LDHB-203ENST00000396076 SENP3Q9H4L4 574 aaPredicted RBP32.86■■■□□ 2.85
LDHB-203ENST00000396076 ADGRB1O14514 1584 aa32.85■■■□□ 2.85
LDHB-203ENST00000396076 LTKP29376 864 aa32.84■■■□□ 2.85
LDHB-203ENST00000396076 TMEM132EQ6IEE7 984 aa32.84■■■□□ 2.85
LDHB-203ENST00000396076 TXNDC2Q86VQ3 553 aa32.84■■■□□ 2.85
LDHB-203ENST00000396076 EID1Q9Y6B2 187 aa32.84■■■□□ 2.85
LDHB-203ENST00000396076 DIEXFQ68CQ4 756 aaKnown RBP32.82■■■□□ 2.84
LDHB-203ENST00000396076 C11orf95C9JLR9 678 aaPredicted RBP32.81■■■□□ 2.84
LDHB-203ENST00000396076 IQGAP1P46940 1657 aa32.81■■■□□ 2.84
LDHB-203ENST00000396076 ALKQ9UM73 1620 aa32.8■■■□□ 2.84
LDHB-203ENST00000396076 ZNF142P52746 1687 aaPredicted RBP32.79■■■□□ 2.84
LDHB-203ENST00000396076 WASHC2AQ641Q2 1341 aa32.78■■■□□ 2.84
LDHB-203ENST00000396076 EIF3AQ14152 1382 aaKnown RBP32.78■■■□□ 2.84
LDHB-203ENST00000396076 PLEKHG1Q9ULL1 1385 aa32.77■■■□□ 2.84
LDHB-203ENST00000396076 TESK2Q96S53 571 aa32.75■■■□□ 2.83
LDHB-203ENST00000396076 BCANQ96GW7 911 aa32.74■■■□□ 2.83
LDHB-203ENST00000396076 ASXL1Q8IXJ9 1541 aa32.73■■■□□ 2.83
LDHB-203ENST00000396076 TRAK1Q9UPV9 953 aa32.73■■■□□ 2.83
LDHB-203ENST00000396076 CCDC7Q96M83 1385 aa32.73■■■□□ 2.83
LDHB-203ENST00000396076 NRXN3Q9Y4C0 1643 aa32.73■■■□□ 2.83
LDHB-203ENST00000396076 KIF7Q2M1P5 1343 aa32.71■■■□□ 2.83
LDHB-203ENST00000396076 DDX10Q13206 875 aaKnown RBP32.71■■■□□ 2.83
LDHB-203ENST00000396076 ANKLE2Q86XL3 938 aa32.68■■■□□ 2.82
LDHB-203ENST00000396076 ADAMTS13Q76LX8 1427 aa32.68■■■□□ 2.82
LDHB-203ENST00000396076 YTHDC2Q9H6S0 1430 aaKnown RBP32.68■■■□□ 2.82
LDHB-203ENST00000396076 STK26Q9P289 416 aa32.66■■■□□ 2.82
LDHB-203ENST00000396076 SETD1AO15047 1707 aaKnown RBP32.65■■■□□ 2.82
LDHB-203ENST00000396076 METP08581 1390 aa32.65■■■□□ 2.82
LDHB-203ENST00000396076 CENPJQ9HC77 1338 aaPredicted RBP32.64■■■□□ 2.82
LDHB-203ENST00000396076 TMF1P82094 1093 aa32.63■■■□□ 2.81
LDHB-203ENST00000396076 LRPPRCP42704 1394 aaKnown RBP32.62■■■□□ 2.81
LDHB-203ENST00000396076 MED14O60244 1454 aa32.62■■■□□ 2.81
LDHB-203ENST00000396076 SLC24A1O60721 1099 aa32.61■■■□□ 2.81
LDHB-203ENST00000396076 TBX22Q9Y458 520 aa32.61■■■□□ 2.81
LDHB-203ENST00000396076 SLC26A8Q96RN1 970 aa32.6■■■□□ 2.81
LDHB-203ENST00000396076 DISP3Q9P2K9 1392 aa32.59■■■□□ 2.81
LDHB-203ENST00000396076 POLR1AO95602 1720 aaPredicted RBP32.59■■■□□ 2.81
LDHB-203ENST00000396076 ABCC11Q96J66 1382 aa32.58■■■□□ 2.81
LDHB-203ENST00000396076 SBNO2Q9Y2G9 1366 aa32.58■■■□□ 2.81
LDHB-203ENST00000396076 POLR3GLQ9BT43 218 aa32.56■■■□□ 2.8
LDHB-203ENST00000396076 ARHGEF28Q8N1W1 1705 aaKnown RBP32.55■■■□□ 2.8
LDHB-203ENST00000396076 DLC1Q96QB1 1528 aa32.52■■■□□ 2.8
LDHB-203ENST00000396076 PRAM1Q96QH2 718 aa32.52■■■□□ 2.8
LDHB-203ENST00000396076 DIP2AQ14689 1571 aa32.51■■■□□ 2.8
LDHB-203ENST00000396076 CDCA8Q53HL2 280 aa32.51■■■□□ 2.79
LDHB-203ENST00000396076 POGKQ9P215 609 aa32.51■■■□□ 2.79
LDHB-203ENST00000396076 SIRT1Q96EB6 747 aa32.5■■■□□ 2.79
LDHB-203ENST00000396076 TECPR2O15040 1411 aa32.49■■■□□ 2.79
LDHB-203ENST00000396076 NCKAP5LQ9HCH0 1330 aa32.48■■■□□ 2.79
LDHB-203ENST00000396076 QRICH2Q9H0J4 1663 aa32.47■■■□□ 2.79
LDHB-203ENST00000396076 NPHP4O75161 1426 aaPredicted RBP32.47■■■□□ 2.79
LDHB-203ENST00000396076 SAFB2Q14151 953 aaKnown RBP eCLIP32.46■■■□□ 2.79
LDHB-203ENST00000396076 PTPRUQ92729 1446 aa32.45■■■□□ 2.79
LDHB-203ENST00000396076 WAPLQ7Z5K2 1190 aa32.44■■■□□ 2.78
LDHB-203ENST00000396076 PIK3R4Q99570 1358 aa32.43■■■□□ 2.78
LDHB-203ENST00000396076 FAM135BQ49AJ0 1406 aa32.43■■■□□ 2.78
LDHB-203ENST00000396076 AMOTL2Q9Y2J4 779 aa32.42■■■□□ 2.78
LDHB-203ENST00000396076 LMTK3Q96Q04 1460 aa32.42■■■□□ 2.78
LDHB-203ENST00000396076 HSPA2P54652 639 aa32.41■■■□□ 2.78
LDHB-203ENST00000396076 KNDC1Q76NI1 1749 aa32.41■■■□□ 2.78
LDHB-203ENST00000396076 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
LDHB-203ENST00000396076 CPS1P31327 1500 aa32.4■■■□□ 2.78
LDHB-203ENST00000396076 EVC2Q86UK5 1308 aa32.39■■■□□ 2.78
LDHB-203ENST00000396076 ROBO2Q9HCK4 1378 aa32.38■■■□□ 2.77
LDHB-203ENST00000396076 MINK1Q8N4C8 1332 aaPredicted RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms