RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 PDE4AP27815 886 aa8.41□□□□□ -1.06
BDNF-203ENST00000395978 CENPQQ7L2Z9 268 aaPredicted RBP8.41□□□□□ -1.06
BDNF-203ENST00000395978 TEX14Q8IWB6 1497 aa8.4□□□□□ -1.07
BDNF-203ENST00000395978 IPO8O15397 1037 aaKnown RBP8.4□□□□□ -1.07
BDNF-203ENST00000395978 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
BDNF-203ENST00000395978 RWDD1Q9H446 243 aaPredicted RBP8.39□□□□□ -1.07
BDNF-203ENST00000395978 PMFBP1Q8TBY8 1022 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 CLUAP1Q96AJ1 413 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 RAPGEF3O95398 923 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 FAM69CQ0P6D2 419 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 C14orf37Q86TY3 774 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 RUNDC1Q96C34 613 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 SLC12A5Q9H2X9 1139 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 CALD1Q05682 793 aaKnown RBP8.38□□□□□ -1.07
BDNF-203ENST00000395978 SYCP2Q9BX26 1530 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 KDM5BQ9UGL1 1544 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 FAM135AQ9P2D6 1515 aa8.38□□□□□ -1.07
BDNF-203ENST00000395978 KCNA4P22459 653 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 SMC4Q9NTJ3 1288 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 PRAG1Q86YV5 1406 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 RPGRIP1LQ68CZ1 1315 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.37□□□□□ -1.07
BDNF-203ENST00000395978 ASXL2Q76L83 1435 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 MTHFSP49914 203 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 ADGRL1O94910 1474 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 GCC2Q8IWJ2 1684 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 ARHGEF12Q9NZN5 1544 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 SLC52A1Q9NWF4 448 aa8.37□□□□□ -1.07
BDNF-203ENST00000395978 DHX29Q7Z478 1369 aaKnown RBP8.36□□□□□ -1.07
BDNF-203ENST00000395978 TRHP20396 242 aaPredicted RBP8.36□□□□□ -1.07
BDNF-203ENST00000395978 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
BDNF-203ENST00000395978 DUOX2Q9NRD8 1548 aa8.36□□□□□ -1.07
BDNF-203ENST00000395978 DISP3Q9P2K9 1392 aa8.36□□□□□ -1.07
BDNF-203ENST00000395978 FANCAO15360 1455 aa8.36□□□□□ -1.07
BDNF-203ENST00000395978 WDR7Q9Y4E6 1490 aa8.36□□□□□ -1.07
BDNF-203ENST00000395978 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
BDNF-203ENST00000395978 TESK2Q96S53 571 aa8.36□□□□□ -1.07
BDNF-203ENST00000395978 COG6Q9Y2V7 657 aa8.36□□□□□ -1.07
BDNF-203ENST00000395978 SPATA31E1Q6ZUB1 1445 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 SOX12O15370 315 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 ITPRIPQ8IWB1 547 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 BCL2L13Q9BXK5 485 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 ADGRF5Q8IZF2 1346 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 CD109Q6YHK3 1445 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 TRAPPC8Q9Y2L5 1435 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 TCP11L2Q8N4U5 519 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 KDM6BO15054 1643 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 FAM161AQ3B820 660 aa8.35□□□□□ -1.07
BDNF-203ENST00000395978 ABCC10Q5T3U5 1492 aa8.34□□□□□ -1.07
BDNF-203ENST00000395978 SCAF11Q99590 1463 aaKnown RBP8.34□□□□□ -1.07
BDNF-203ENST00000395978 DIAPH1O60610 1272 aaKnown RBP8.34□□□□□ -1.07
BDNF-203ENST00000395978 GGNBP2Q9H3C7 697 aa8.34□□□□□ -1.07
BDNF-203ENST00000395978 DEKP35659 375 aaKnown RBP8.34□□□□□ -1.07
BDNF-203ENST00000395978 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
BDNF-203ENST00000395978 ZKSCAN2Q63HK3 967 aa8.33□□□□□ -1.08
BDNF-203ENST00000395978 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
BDNF-203ENST00000395978 MBD5Q9P267 1494 aa8.33□□□□□ -1.08
BDNF-203ENST00000395978 ZCCHC11Q5TAX3 1644 aaKnown RBP8.32□□□□□ -1.08
BDNF-203ENST00000395978 PARD3Q8TEW0 1356 aa8.32□□□□□ -1.08
BDNF-203ENST00000395978 LMOD3Q0VAK6 560 aa8.32□□□□□ -1.08
BDNF-203ENST00000395978 EID1Q9Y6B2 187 aa8.32□□□□□ -1.08
BDNF-203ENST00000395978 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.31□□□□□ -1.08
BDNF-203ENST00000395978 PRAM1Q96QH2 718 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 RIMBP3CA6NJZ7 1639 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 RIMBP3BA6NNM3 1639 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 RIMBP3Q9UFD9 1639 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 LRRIQ1Q96JM4 1722 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 RIPK4P57078 832 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 SLFN5Q08AF3 891 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 RTF1Q92541 710 aaKnown RBP8.31□□□□□ -1.08
BDNF-203ENST00000395978 COG3Q96JB2 828 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 ADCY10Q96PN6 1610 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 PDE3AQ14432 1141 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 AMER1Q5JTC6 1135 aaPredicted RBP8.31□□□□□ -1.08
BDNF-203ENST00000395978 RTEL1-TNFRSF6BF6WH68 1400 aa8.31□□□□□ -1.08
BDNF-203ENST00000395978 AAMPQ13685 434 aa8.3□□□□□ -1.08
BDNF-203ENST00000395978 PANK1Q8TE04 598 aa8.3□□□□□ -1.08
BDNF-203ENST00000395978 C14orf93Q9H972 538 aaKnown RBP8.3□□□□□ -1.08
BDNF-203ENST00000395978 NUTM2FA1L443 756 aa8.3□□□□□ -1.08
BDNF-203ENST00000395978 BCAR3O75815 825 aa8.3□□□□□ -1.08
BDNF-203ENST00000395978 DZIP1LQ8IYY4 767 aaKnown RBP8.3□□□□□ -1.08
BDNF-203ENST00000395978 IDI1Q13907 227 aa8.29□□□□□ -1.08
BDNF-203ENST00000395978 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
BDNF-203ENST00000395978 A2MP01023 1474 aa8.29□□□□□ -1.08
BDNF-203ENST00000395978 DNAJC5Q9H3Z4 198 aa8.29□□□□□ -1.08
BDNF-203ENST00000395978 ARHGEF5Q12774 1597 aa8.29□□□□□ -1.08
BDNF-203ENST00000395978 NSD3Q9BZ95 1437 aa8.29□□□□□ -1.08
BDNF-203ENST00000395978 WDR63Q8IWG1 891 aa8.29□□□□□ -1.08
BDNF-203ENST00000395978 NGDNQ8NEJ9 315 aaKnown RBP8.29□□□□□ -1.08
BDNF-203ENST00000395978 GPRASP1Q5JY77 1395 aa8.28□□□□□ -1.08
BDNF-203ENST00000395978 NOS1P29475 1434 aa8.28□□□□□ -1.08
BDNF-203ENST00000395978 WWC1Q8IX03 1113 aa8.28□□□□□ -1.08
BDNF-203ENST00000395978 ANP32BQ92688 251 aaKnown RBP8.28□□□□□ -1.08
BDNF-203ENST00000395978 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
BDNF-203ENST00000395978 DDX19BQ9UMR2 479 aa8.28□□□□□ -1.08
BDNF-203ENST00000395978 DENND4BO75064 1496 aaPredicted RBP8.28□□□□□ -1.08
BDNF-203ENST00000395978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.28□□□□□ -1.08
BDNF-203ENST00000395978 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
BDNF-203ENST00000395978 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms