RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 QTRT2Q9H974 415 aaKnown RBP11.07□□□□□ -0.64
RAB5CP1-201ENST00000395972 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
RAB5CP1-201ENST00000395972 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
RAB5CP1-201ENST00000395972 TMEM94Q12767 1356 aa11.06□□□□□ -0.64
RAB5CP1-201ENST00000395972 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
RAB5CP1-201ENST00000395972 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
RAB5CP1-201ENST00000395972 UGGT1Q9NYU2 1555 aa11.05□□□□□ -0.64
RAB5CP1-201ENST00000395972 SLAIN2Q9P270 581 aa11.05□□□□□ -0.64
RAB5CP1-201ENST00000395972 SPAG9O60271 1321 aaKnown RBP11.05□□□□□ -0.64
RAB5CP1-201ENST00000395972 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
RAB5CP1-201ENST00000395972 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
RAB5CP1-201ENST00000395972 PROSER2Q86WR7 435 aaPredicted RBP11.03□□□□□ -0.64
RAB5CP1-201ENST00000395972 KDM5DQ9BY66 1539 aa11.03□□□□□ -0.64
RAB5CP1-201ENST00000395972 LRRC9Q6ZRR7 1453 aa11.02□□□□□ -0.65
RAB5CP1-201ENST00000395972 PRXQ9BXM0 1461 aa11.02□□□□□ -0.65
RAB5CP1-201ENST00000395972 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
RAB5CP1-201ENST00000395972 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
RAB5CP1-201ENST00000395972 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
RAB5CP1-201ENST00000395972 C8orf37Q96NL8 207 aa11.01□□□□□ -0.65
RAB5CP1-201ENST00000395972 ZNF777Q9ULD5 760 aaPredicted RBP11.01□□□□□ -0.65
RAB5CP1-201ENST00000395972 KIF14Q15058 1648 aa11.01□□□□□ -0.65
RAB5CP1-201ENST00000395972 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
RAB5CP1-201ENST00000395972 MIA2Q96PC5 1412 aa11.01□□□□□ -0.65
RAB5CP1-201ENST00000395972 A2MP01023 1474 aa11□□□□□ -0.65
RAB5CP1-201ENST00000395972 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
RAB5CP1-201ENST00000395972 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
RAB5CP1-201ENST00000395972 AKT1S1Q96B36 256 aa11□□□□□ -0.65
RAB5CP1-201ENST00000395972 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
RAB5CP1-201ENST00000395972 NLRP1Q9C000 1473 aa11□□□□□ -0.65
RAB5CP1-201ENST00000395972 NKX1-1Q15270 411 aaPredicted RBP10.99□□□□□ -0.65
RAB5CP1-201ENST00000395972 XIRP1Q702N8 1843 aaKnown RBP10.99□□□□□ -0.65
RAB5CP1-201ENST00000395972 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
RAB5CP1-201ENST00000395972 TXNDC2Q86VQ3 553 aa10.98□□□□□ -0.65
RAB5CP1-201ENST00000395972 LRP5O75197 1615 aa10.98□□□□□ -0.65
RAB5CP1-201ENST00000395972 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
RAB5CP1-201ENST00000395972 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.65
RAB5CP1-201ENST00000395972 MSH6P52701 1360 aa10.97□□□□□ -0.65
RAB5CP1-201ENST00000395972 PZPP20742 1482 aa10.97□□□□□ -0.65
RAB5CP1-201ENST00000395972 ATP7AQ04656 1500 aa10.97□□□□□ -0.65
RAB5CP1-201ENST00000395972 SAMD9LQ8IVG5 1584 aa10.96□□□□□ -0.65
RAB5CP1-201ENST00000395972 CLIP1P30622 1438 aa10.95□□□□□ -0.66
RAB5CP1-201ENST00000395972 WASHC2CQ9Y4E1 1318 aa10.95□□□□□ -0.66
RAB5CP1-201ENST00000395972 LTKP29376 864 aa10.95□□□□□ -0.66
RAB5CP1-201ENST00000395972 HOMEZQ8IX15 550 aa10.95□□□□□ -0.66
RAB5CP1-201ENST00000395972 PLXNC1O60486 1568 aa10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 SCAF11Q99590 1463 aaKnown RBP10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 TROQ12816 1431 aaPredicted RBP10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 KCNA6P17658 529 aa10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 HRCP23327 699 aa10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 DEFB132Q7Z7B7 95 aa10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 ZC3H13Q5T200 1668 aaKnown RBP10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
RAB5CP1-201ENST00000395972 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
RAB5CP1-201ENST00000395972 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
RAB5CP1-201ENST00000395972 STK25O00506 426 aa10.92□□□□□ -0.66
RAB5CP1-201ENST00000395972 KIF3BO15066 747 aa10.92□□□□□ -0.66
RAB5CP1-201ENST00000395972 EID1Q9Y6B2 187 aa10.92□□□□□ -0.66
RAB5CP1-201ENST00000395972 CDC42BPBQ9Y5S2 1711 aa10.92□□□□□ -0.66
RAB5CP1-201ENST00000395972 SF3B2Q13435 895 aaKnown RBP10.9□□□□□ -0.66
RAB5CP1-201ENST00000395972 ADAMTS2O95450 1211 aa10.89□□□□□ -0.67
RAB5CP1-201ENST00000395972 SLC26A8Q96RN1 970 aa10.89□□□□□ -0.67
RAB5CP1-201ENST00000395972 SYCP2Q9BX26 1530 aa10.89□□□□□ -0.67
RAB5CP1-201ENST00000395972 SHPRHQ149N8 1683 aa10.89□□□□□ -0.67
RAB5CP1-201ENST00000395972 NWD1Q149M9 1564 aa10.88□□□□□ -0.67
RAB5CP1-201ENST00000395972 SGIP1Q9BQI5 828 aa10.88□□□□□ -0.67
RAB5CP1-201ENST00000395972 USP21Q9UK80 565 aa10.88□□□□□ -0.67
RAB5CP1-201ENST00000395972 NUBP1P53384 320 aa10.87□□□□□ -0.67
RAB5CP1-201ENST00000395972 TRPC5Q9UL62 973 aaPredicted RBP10.87□□□□□ -0.67
RAB5CP1-201ENST00000395972 PRDM15P57071 1507 aaPredicted RBP10.87□□□□□ -0.67
RAB5CP1-201ENST00000395972 PREX2Q70Z35 1606 aa10.87□□□□□ -0.67
RAB5CP1-201ENST00000395972 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
RAB5CP1-201ENST00000395972 C1QTNF8P60827 252 aa10.86□□□□□ -0.67
RAB5CP1-201ENST00000395972 NHSL1Q5SYE7 1610 aa10.85□□□□□ -0.67
RAB5CP1-201ENST00000395972 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
RAB5CP1-201ENST00000395972 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
RAB5CP1-201ENST00000395972 TIAM1Q13009 1591 aa10.85□□□□□ -0.67
RAB5CP1-201ENST00000395972 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
RAB5CP1-201ENST00000395972 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
RAB5CP1-201ENST00000395972 EP400Q96L91 3159 aa10.83□□□□□ -0.68
RAB5CP1-201ENST00000395972 INO80Q9ULG1 1556 aaPredicted RBP10.83□□□□□ -0.68
RAB5CP1-201ENST00000395972 DHX29Q7Z478 1369 aaKnown RBP10.83□□□□□ -0.68
RAB5CP1-201ENST00000395972 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
RAB5CP1-201ENST00000395972 ATF3P18847 181 aa10.83□□□□□ -0.68
RAB5CP1-201ENST00000395972 ZNF784Q8NCA9 323 aaPredicted RBP10.83□□□□□ -0.68
RAB5CP1-201ENST00000395972 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
RAB5CP1-201ENST00000395972 ABCC3O15438 1527 aa10.82□□□□□ -0.68
RAB5CP1-201ENST00000395972 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 BRINP3Q76B58 766 aa10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 LRRC59Q96AG4 307 aaKnown RBP10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 DIP2AQ14689 1571 aa10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 NKTRP30414 1462 aaKnown RBP10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
RAB5CP1-201ENST00000395972 SLIT1O75093 1534 aa10.79□□□□□ -0.68
RAB5CP1-201ENST00000395972 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
RAB5CP1-201ENST00000395972 BCL9LQ86UU0 1499 aa10.79□□□□□ -0.68
RAB5CP1-201ENST00000395972 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
RAB5CP1-201ENST00000395972 KIAA1107Q9UPP5 1409 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms