RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
SIN3A-202ENST00000394947 BRPF1P55201 1214 aaPredicted RBP14.93□□□□□ -0.02
SIN3A-202ENST00000394947 C9orf78Q9NZ63 289 aaPredicted RBP14.93□□□□□ -0.02
SIN3A-202ENST00000394947 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
SIN3A-202ENST00000394947 R3HCC1Q9Y3T6 440 aaKnown RBP14.93□□□□□ -0.02
SIN3A-202ENST00000394947 MNS1Q8NEH6 495 aa14.93□□□□□ -0.02
SIN3A-202ENST00000394947 H0YHG0 523 aa14.92□□□□□ -0.02
SIN3A-202ENST00000394947 ANKRD20A12PQ8NF67 263 aa14.92□□□□□ -0.02
SIN3A-202ENST00000394947 EXOC6Q8TAG9 804 aa14.92□□□□□ -0.02
SIN3A-202ENST00000394947 IKQ13123 557 aaPredicted RBP14.92□□□□□ -0.02
SIN3A-202ENST00000394947 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.92□□□□□ -0.02
SIN3A-202ENST00000394947 CCDC47Q96A33 483 aaKnown RBP14.92□□□□□ -0.02
SIN3A-202ENST00000394947 SASS6Q6UVJ0 657 aa14.91□□□□□ -0.02
SIN3A-202ENST00000394947 MPNDQ8N594 471 aa14.91□□□□□ -0.02
SIN3A-202ENST00000394947 CCDC180Q9P1Z9 1646 aa14.91□□□□□ -0.02
SIN3A-202ENST00000394947 RBM10P98175 930 aaKnown RBP14.91□□□□□ -0.02
SIN3A-202ENST00000394947 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
SIN3A-202ENST00000394947 RNF214Q8ND24 703 aa14.91□□□□□ -0.02
SIN3A-202ENST00000394947 CHMP4CQ96CF2 233 aa14.9□□□□□ -0.02
SIN3A-202ENST00000394947 ATP2B1P20020 1258 aa14.9□□□□□ -0.02
SIN3A-202ENST00000394947 IFIT2P09913 472 aaKnown RBP14.9□□□□□ -0.02
SIN3A-202ENST00000394947 PDE4AP27815 886 aa14.89□□□□□ -0.03
SIN3A-202ENST00000394947 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
SIN3A-202ENST00000394947 ERICH2A1L162 156 aa14.88□□□□□ -0.03
SIN3A-202ENST00000394947 CCER2I3L3R5 266 aa14.88□□□□□ -0.03
SIN3A-202ENST00000394947 NEFHP12036 1026 aa14.88□□□□□ -0.03
SIN3A-202ENST00000394947 PPP1R1BQ9UD71 204 aaPredicted RBP14.88□□□□□ -0.03
SIN3A-202ENST00000394947 CEBPZQ03701 1054 aaKnown RBP14.87□□□□□ -0.03
SIN3A-202ENST00000394947 OFD1O75665 1012 aa14.87□□□□□ -0.03
SIN3A-202ENST00000394947 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
SIN3A-202ENST00000394947 NEUROD6Q96NK8 337 aa14.87□□□□□ -0.03
SIN3A-202ENST00000394947 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
SIN3A-202ENST00000394947 TRDNQ13061 729 aa14.86□□□□□ -0.03
SIN3A-202ENST00000394947 FAM161AQ3B820 660 aa14.86□□□□□ -0.03
SIN3A-202ENST00000394947 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
SIN3A-202ENST00000394947 RALBP1Q15311 655 aa14.86□□□□□ -0.03
SIN3A-202ENST00000394947 TSPYL1Q9H0U9 437 aa14.85□□□□□ -0.03
SIN3A-202ENST00000394947 TERF2IPQ9NYB0 399 aa14.85□□□□□ -0.03
SIN3A-202ENST00000394947 WASHC4Q2M389 1173 aa14.85□□□□□ -0.03
SIN3A-202ENST00000394947 SPC24Q8NBT2 197 aa14.85□□□□□ -0.03
SIN3A-202ENST00000394947 NOM1Q5C9Z4 860 aaKnown RBP14.85□□□□□ -0.03
SIN3A-202ENST00000394947 CCDC191Q8NCU4 936 aa14.85□□□□□ -0.03
SIN3A-202ENST00000394947 SMC3Q9UQE7 1217 aa14.85□□□□□ -0.03
SIN3A-202ENST00000394947 SMC2O95347 1197 aa14.84□□□□□ -0.03
SIN3A-202ENST00000394947 CPLX2Q6PUV4 134 aaKnown RBP14.84□□□□□ -0.03
SIN3A-202ENST00000394947 HOOK1Q9UJC3 728 aaKnown RBP14.84□□□□□ -0.03
SIN3A-202ENST00000394947 RDXP35241 583 aaKnown RBP14.84□□□□□ -0.03
SIN3A-202ENST00000394947 HSP90B2PQ58FF3 399 aa14.84□□□□□ -0.03
SIN3A-202ENST00000394947 TEFQ10587 303 aa14.83□□□□□ -0.04
SIN3A-202ENST00000394947 RBM33Q96EV2 1170 aaKnown RBP14.83□□□□□ -0.04
SIN3A-202ENST00000394947 NUTM2GQ5VZR2 741 aa14.83□□□□□ -0.04
SIN3A-202ENST00000394947 ZKSCAN1P17029 563 aaPredicted RBP14.83□□□□□ -0.04
SIN3A-202ENST00000394947 AXDND1Q5T1B0 1012 aaPredicted RBP14.83□□□□□ -0.04
SIN3A-202ENST00000394947 HDAC5Q9UQL6 1122 aa14.83□□□□□ -0.04
SIN3A-202ENST00000394947 FAM193AP78312 1265 aa14.82□□□□□ -0.04
SIN3A-202ENST00000394947 CENPHQ9H3R5 247 aa14.82□□□□□ -0.04
SIN3A-202ENST00000394947 KIF3BO15066 747 aa14.82□□□□□ -0.04
SIN3A-202ENST00000394947 FAM177A1Q8N128 213 aaPredicted RBP14.82□□□□□ -0.04
SIN3A-202ENST00000394947 EID1Q9Y6B2 187 aa14.82□□□□□ -0.04
SIN3A-202ENST00000394947 HNRNPMP52272 730 aaKnown RBP eCLIP14.82□□□□□ -0.04
SIN3A-202ENST00000394947 SKOR2Q2VWA4 1001 aaPredicted RBP14.81□□□□□ -0.04
SIN3A-202ENST00000394947 NEXNQ0ZGT2 675 aa14.81□□□□□ -0.04
SIN3A-202ENST00000394947 CDR1P51861 262 aa14.81□□□□□ -0.04
SIN3A-202ENST00000394947 ATP2B2Q01814 1243 aa14.81□□□□□ -0.04
SIN3A-202ENST00000394947 ENOX2Q16206 610 aaKnown RBP14.81□□□□□ -0.04
SIN3A-202ENST00000394947 CCDC97Q96F63 343 aaPredicted RBP14.81□□□□□ -0.04
SIN3A-202ENST00000394947 LMOD3Q0VAK6 560 aa14.81□□□□□ -0.04
SIN3A-202ENST00000394947 NUP155O75694 1391 aa14.81□□□□□ -0.04
SIN3A-202ENST00000394947 OLFM4Q6UX06 510 aa14.81□□□□□ -0.04
SIN3A-202ENST00000394947 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
SIN3A-202ENST00000394947 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
SIN3A-202ENST00000394947 PANK3Q9H999 370 aa14.8□□□□□ -0.04
SIN3A-202ENST00000394947 ARGLU1Q9NWB6 273 aaPredicted RBP14.8□□□□□ -0.04
SIN3A-202ENST00000394947 LNPKQ9C0E8 428 aa14.79□□□□□ -0.04
SIN3A-202ENST00000394947 ZHX3Q9H4I2 956 aa14.79□□□□□ -0.04
SIN3A-202ENST00000394947 TAX1BP1Q86VP1 789 aa14.79□□□□□ -0.04
SIN3A-202ENST00000394947 RUFY2Q8WXA3 655 aa14.79□□□□□ -0.04
SIN3A-202ENST00000394947 CGNL1Q0VF96 1302 aa14.79□□□□□ -0.04
SIN3A-202ENST00000394947 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.042e-6■■■■□ 22
SIN3A-202ENST00000394947 FKBP5Q13451 457 aaPredicted RBP14.78□□□□□ -0.04
SIN3A-202ENST00000394947 CCDC73Q6ZRK6 1079 aa14.78□□□□□ -0.04
SIN3A-202ENST00000394947 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
SIN3A-202ENST00000394947 PPM1FP49593 454 aaPredicted RBP14.78□□□□□ -0.04
SIN3A-202ENST00000394947 CENPQQ7L2Z9 268 aaPredicted RBP14.78□□□□□ -0.04
SIN3A-202ENST00000394947 ZKSCAN2Q63HK3 967 aa14.78□□□□□ -0.04
SIN3A-202ENST00000394947 HMOX1P09601 288 aa14.77□□□□□ -0.04
SIN3A-202ENST00000394947 CCDC173Q0VFZ6 552 aa14.77□□□□□ -0.04
SIN3A-202ENST00000394947 SAFBQ15424 915 aaKnown RBP eCLIP14.77□□□□□ -0.04
SIN3A-202ENST00000394947 DNAJC2Q99543 621 aaKnown RBP14.77□□□□□ -0.05
SIN3A-202ENST00000394947 COG3Q96JB2 828 aa14.77□□□□□ -0.05
SIN3A-202ENST00000394947 ACBD3Q9H3P7 528 aa14.77□□□□□ -0.05
SIN3A-202ENST00000394947 SETD5Q9C0A6 1442 aa14.76□□□□□ -0.05
SIN3A-202ENST00000394947 EIF3AQ14152 1382 aaKnown RBP14.76□□□□□ -0.05
SIN3A-202ENST00000394947 CCAR1Q8IX12 1150 aaKnown RBP14.76□□□□□ -0.05
SIN3A-202ENST00000394947 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.76□□□□□ -0.05
SIN3A-202ENST00000394947 MAP4K4O95819 1239 aaPredicted RBP14.76□□□□□ -0.05
SIN3A-202ENST00000394947 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
SIN3A-202ENST00000394947 SEPT7Q16181 437 aaKnown RBP14.75□□□□□ -0.05
SIN3A-202ENST00000394947 STK3Q13188 491 aa14.75□□□□□ -0.05
SIN3A-202ENST00000394947 SEPT11Q9NVA2 429 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms