RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 DDX58O95786 925 aaKnown RBP12.78□□□□□ -0.36
COL4A6-203ENST00000394872 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
COL4A6-203ENST00000394872 APPP05067 770 aa12.77□□□□□ -0.36
COL4A6-203ENST00000394872 GOLGA6L1Q8N7Z2 621 aa12.77□□□□□ -0.36
COL4A6-203ENST00000394872 USP47Q96K76 1375 aa12.77□□□□□ -0.36
COL4A6-203ENST00000394872 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.36
COL4A6-203ENST00000394872 PRDM2Q13029 1718 aa12.77□□□□□ -0.37
COL4A6-203ENST00000394872 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
COL4A6-203ENST00000394872 PLIN1O60240 522 aa12.76□□□□□ -0.37
COL4A6-203ENST00000394872 MCTP1Q6DN14 999 aa12.76□□□□□ -0.37
COL4A6-203ENST00000394872 RIPK4P57078 832 aa12.76□□□□□ -0.37
COL4A6-203ENST00000394872 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
COL4A6-203ENST00000394872 RUFY2Q8WXA3 655 aa12.76□□□□□ -0.37
COL4A6-203ENST00000394872 TPM2P07951 284 aa12.75□□□□□ -0.37
COL4A6-203ENST00000394872 DHX16O60231 1041 aaKnown RBP12.75□□□□□ -0.37
COL4A6-203ENST00000394872 TRIM29Q14134 588 aa12.75□□□□□ -0.37
COL4A6-203ENST00000394872 SMARCA4P51532 1647 aa12.75□□□□□ -0.37
COL4A6-203ENST00000394872 PHF23Q9BUL5 403 aaPredicted RBP12.75□□□□□ -0.37
COL4A6-203ENST00000394872 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
COL4A6-203ENST00000394872 FOXD4L6Q3SYB3 417 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-203ENST00000394872 CPLX2Q6PUV4 134 aaKnown RBP12.74□□□□□ -0.37
COL4A6-203ENST00000394872 FOXD4L3Q6VB84 417 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-203ENST00000394872 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
COL4A6-203ENST00000394872 APAF1O14727 1248 aa12.74□□□□□ -0.37
COL4A6-203ENST00000394872 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
COL4A6-203ENST00000394872 ANO2Q9NQ90 1003 aa12.74□□□□□ -0.37
COL4A6-203ENST00000394872 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
COL4A6-203ENST00000394872 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL4A6-203ENST00000394872 FKBP5Q13451 457 aaPredicted RBP12.73□□□□□ -0.37
COL4A6-203ENST00000394872 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
COL4A6-203ENST00000394872 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
COL4A6-203ENST00000394872 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
COL4A6-203ENST00000394872 GAPVD1Q14C86 1478 aa12.73□□□□□ -0.37
COL4A6-203ENST00000394872 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
COL4A6-203ENST00000394872 TSPYL4Q9UJ04 414 aa12.73□□□□□ -0.37
COL4A6-203ENST00000394872 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
COL4A6-203ENST00000394872 DHX57Q6P158 1386 aaKnown RBP12.72□□□□□ -0.37
COL4A6-203ENST00000394872 GOLGA6L19H0YKK7 550 aa12.72□□□□□ -0.37
COL4A6-203ENST00000394872 NUTM2GQ5VZR2 741 aa12.72□□□□□ -0.37
COL4A6-203ENST00000394872 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
COL4A6-203ENST00000394872 ROCK1Q13464 1354 aa12.71□□□□□ -0.37
COL4A6-203ENST00000394872 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.37
COL4A6-203ENST00000394872 TRDNQ13061 729 aa12.71□□□□□ -0.37
COL4A6-203ENST00000394872 DDX19BQ9UMR2 479 aa12.71□□□□□ -0.37
COL4A6-203ENST00000394872 RRP1P56182 461 aaKnown RBP12.7□□□□□ -0.38
COL4A6-203ENST00000394872 NFXL1Q6ZNB6 911 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 NLRP2Q9NX02 1062 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 USP35Q9P2H5 1018 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 CPLX1O14810 134 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 HMOX1P09601 288 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 ERICH2A1L162 156 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 TPM1P09493 284 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 BECN2A8MW95 431 aa12.7□□□□□ -0.38
COL4A6-203ENST00000394872 MYOM3Q5VTT5 1437 aa12.69□□□□□ -0.38
COL4A6-203ENST00000394872 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-203ENST00000394872 EXOC6Q8TAG9 804 aa12.69□□□□□ -0.38
COL4A6-203ENST00000394872 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
COL4A6-203ENST00000394872 CCDC47Q96A33 483 aaKnown RBP12.69□□□□□ -0.38
COL4A6-203ENST00000394872 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-203ENST00000394872 REC8O95072 547 aa12.69□□□□□ -0.38
COL4A6-203ENST00000394872 PCMTD1Q96MG8 357 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-203ENST00000394872 MIA2Q96PC5 1412 aa12.69□□□□□ -0.38
COL4A6-203ENST00000394872 RUNDC1Q96C34 613 aa12.68□□□□□ -0.38
COL4A6-203ENST00000394872 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
COL4A6-203ENST00000394872 RUSC2Q8N2Y8 1516 aa12.68□□□□□ -0.38
COL4A6-203ENST00000394872 FGD5Q6ZNL6 1462 aa12.68□□□□□ -0.38
COL4A6-203ENST00000394872 RNF20Q5VTR2 975 aa12.68□□□□□ -0.38
COL4A6-203ENST00000394872 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
COL4A6-203ENST00000394872 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
COL4A6-203ENST00000394872 FYB1O15117 783 aa12.67□□□□□ -0.38
COL4A6-203ENST00000394872 GNAI1P63096 354 aa12.67□□□□□ -0.38
COL4A6-203ENST00000394872 CCDC43Q96MW1 224 aaKnown RBP12.66□□□□□ -0.38
COL4A6-203ENST00000394872 NEUROD6Q96NK8 337 aa12.66□□□□□ -0.38
COL4A6-203ENST00000394872 RAD54L2Q9Y4B4 1467 aa12.66□□□□□ -0.38
COL4A6-203ENST00000394872 CCDC27Q2M243 656 aa12.66□□□□□ -0.38
COL4A6-203ENST00000394872 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
COL4A6-203ENST00000394872 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
COL4A6-203ENST00000394872 NLRP6P59044 892 aa12.65□□□□□ -0.38
COL4A6-203ENST00000394872 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.38
COL4A6-203ENST00000394872 CCAR2Q8N163 923 aaKnown RBP12.65□□□□□ -0.38
COL4A6-203ENST00000394872 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
COL4A6-203ENST00000394872 PDE4AP27815 886 aa12.65□□□□□ -0.38
COL4A6-203ENST00000394872 CUX1P39880 1505 aa12.64□□□□□ -0.39
COL4A6-203ENST00000394872 ARHGAP5Q13017 1502 aa12.64□□□□□ -0.39
COL4A6-203ENST00000394872 TNNT3P45378 269 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-203ENST00000394872 ERC2O15083 957 aa12.64□□□□□ -0.39
COL4A6-203ENST00000394872 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-203ENST00000394872 ZBED9Q6R2W3 1325 aa12.64□□□□□ -0.39
COL4A6-203ENST00000394872 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
COL4A6-203ENST00000394872 ZNF644Q9H582 1327 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-203ENST00000394872 GPRASP1Q5JY77 1395 aa12.64□□□□□ -0.39
COL4A6-203ENST00000394872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-203ENST00000394872 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
COL4A6-203ENST00000394872 HOOK1Q9UJC3 728 aaKnown RBP12.64□□□□□ -0.39
COL4A6-203ENST00000394872 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
COL4A6-203ENST00000394872 ESCO1Q5FWF5 840 aa12.63□□□□□ -0.39
COL4A6-203ENST00000394872 FOSBP53539 338 aa12.63□□□□□ -0.39
COL4A6-203ENST00000394872 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms