RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 CCDC146Q8IYE0 955 aa13.06□□□□□ -0.32
PSEN1-204ENST00000394164 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
PSEN1-204ENST00000394164 PLXNC1O60486 1568 aa13.06□□□□□ -0.32
PSEN1-204ENST00000394164 ADGRL1O94910 1474 aa13.06□□□□□ -0.32
PSEN1-204ENST00000394164 KANK1Q14678 1352 aa13.06□□□□□ -0.32
PSEN1-204ENST00000394164 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
PSEN1-204ENST00000394164 ARXQ96QS3 562 aa13.05□□□□□ -0.32
PSEN1-204ENST00000394164 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
PSEN1-204ENST00000394164 COL17A1Q9UMD9 1497 aaPredicted RBP13.05□□□□□ -0.32
PSEN1-204ENST00000394164 WDR7Q9Y4E6 1490 aa13.05□□□□□ -0.32
PSEN1-204ENST00000394164 GPRASP1Q5JY77 1395 aa13.05□□□□□ -0.32
PSEN1-204ENST00000394164 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
PSEN1-204ENST00000394164 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
PSEN1-204ENST00000394164 TMEM132EQ6IEE7 984 aa13.05□□□□□ -0.32
PSEN1-204ENST00000394164 ASXL2Q76L83 1435 aa13.04□□□□□ -0.32
PSEN1-204ENST00000394164 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
PSEN1-204ENST00000394164 ATP10AO60312 1499 aa13.04□□□□□ -0.32
PSEN1-204ENST00000394164 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
PSEN1-204ENST00000394164 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
PSEN1-204ENST00000394164 SAFB2Q14151 953 aaKnown RBP eCLIP13.03□□□□□ -0.32
PSEN1-204ENST00000394164 E9PCH4 1651 aa13.03□□□□□ -0.32
PSEN1-204ENST00000394164 PPP2R1AP30153 589 aa13.02□□□□□ -0.33
PSEN1-204ENST00000394164 FRAT2O75474 233 aaPredicted RBP13.02□□□□□ -0.33
PSEN1-204ENST00000394164 UHRF1BP1LA0JNW5 1464 aa13.01□□□□□ -0.33
PSEN1-204ENST00000394164 PRDM15P57071 1507 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-204ENST00000394164 ZFYVE16Q7Z3T8 1539 aa13.01□□□□□ -0.33
PSEN1-204ENST00000394164 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
PSEN1-204ENST00000394164 MAGI2Q86UL8 1455 aa13.01□□□□□ -0.33
PSEN1-204ENST00000394164 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
PSEN1-204ENST00000394164 VSIG10Q8N0Z9 540 aa13.01□□□□□ -0.33
PSEN1-204ENST00000394164 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
PSEN1-204ENST00000394164 ATP7AQ04656 1500 aa13□□□□□ -0.33
PSEN1-204ENST00000394164 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
PSEN1-204ENST00000394164 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
PSEN1-204ENST00000394164 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
PSEN1-204ENST00000394164 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
PSEN1-204ENST00000394164 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
PSEN1-204ENST00000394164 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.33
PSEN1-204ENST00000394164 CRBNQ96SW2 442 aa12.96□□□□□ -0.34
PSEN1-204ENST00000394164 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.34
PSEN1-204ENST00000394164 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
PSEN1-204ENST00000394164 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
PSEN1-204ENST00000394164 STK26Q9P289 416 aa12.95□□□□□ -0.34
PSEN1-204ENST00000394164 SCAF11Q99590 1463 aaKnown RBP12.95□□□□□ -0.34
PSEN1-204ENST00000394164 FAM43AQ8N2R8 423 aa12.95□□□□□ -0.34
PSEN1-204ENST00000394164 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
PSEN1-204ENST00000394164 APAF1O14727 1248 aa12.94□□□□□ -0.34
PSEN1-204ENST00000394164 MADDQ8WXG6 1647 aa12.94□□□□□ -0.34
PSEN1-204ENST00000394164 CYB5RLQ6IPT4 315 aa12.94□□□□□ -0.34
PSEN1-204ENST00000394164 ZMYND15Q9H091 742 aa12.94□□□□□ -0.34
PSEN1-204ENST00000394164 CD109Q6YHK3 1445 aa12.94□□□□□ -0.34
PSEN1-204ENST00000394164 TRPM2O94759 1503 aa12.94□□□□□ -0.34
PSEN1-204ENST00000394164 NOS1P29475 1434 aa12.94□□□□□ -0.34
PSEN1-204ENST00000394164 PTPRTO14522 1441 aa12.93□□□□□ -0.34
PSEN1-204ENST00000394164 RRAGDQ9NQL2 400 aaPredicted RBP12.93□□□□□ -0.34
PSEN1-204ENST00000394164 PLEKHH1Q9ULM0 1364 aa12.93□□□□□ -0.34
PSEN1-204ENST00000394164 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
PSEN1-204ENST00000394164 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
PSEN1-204ENST00000394164 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-204ENST00000394164 MS4A1P11836 297 aa12.92□□□□□ -0.34
PSEN1-204ENST00000394164 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
PSEN1-204ENST00000394164 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-204ENST00000394164 EIF3AQ14152 1382 aaKnown RBP12.91□□□□□ -0.34
PSEN1-204ENST00000394164 POGKQ9P215 609 aa12.9□□□□□ -0.34
PSEN1-204ENST00000394164 GLIPR1L2Q4G1C9 344 aa12.9□□□□□ -0.34
PSEN1-204ENST00000394164 CENPJQ9HC77 1338 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-204ENST00000394164 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
PSEN1-204ENST00000394164 ABCA9Q8IUA7 1624 aa12.89□□□□□ -0.35
PSEN1-204ENST00000394164 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
PSEN1-204ENST00000394164 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
PSEN1-204ENST00000394164 INO80Q9ULG1 1556 aaPredicted RBP12.88□□□□□ -0.35
PSEN1-204ENST00000394164 TET3O43151 1660 aa12.88□□□□□ -0.35
PSEN1-204ENST00000394164 RGS3P49796 1198 aa12.88□□□□□ -0.35
PSEN1-204ENST00000394164 CABP2Q9NPB3 220 aa12.88□□□□□ -0.35
PSEN1-204ENST00000394164 CEP152O94986 1710 aa12.87□□□□□ -0.35
PSEN1-204ENST00000394164 RNF17Q9BXT8 1623 aaKnown RBP12.87□□□□□ -0.35
PSEN1-204ENST00000394164 MLECQ14165 292 aa12.87□□□□□ -0.35
PSEN1-204ENST00000394164 DUSP27Q5VZP5 1158 aa12.87□□□□□ -0.35
PSEN1-204ENST00000394164 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
PSEN1-204ENST00000394164 KIDINS220Q9ULH0 1771 aa12.86□□□□□ -0.35
PSEN1-204ENST00000394164 BCAR3O75815 825 aa12.86□□□□□ -0.35
PSEN1-204ENST00000394164 BLMP54132 1417 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-204ENST00000394164 NPATQ14207 1427 aa12.86□□□□□ -0.35
PSEN1-204ENST00000394164 LAMC1P11047 1609 aa12.86□□□□□ -0.35
PSEN1-204ENST00000394164 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
PSEN1-204ENST00000394164 MROH1Q8NDA8 1641 aa12.85□□□□□ -0.35
PSEN1-204ENST00000394164 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
PSEN1-204ENST00000394164 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
PSEN1-204ENST00000394164 FBXO31Q5XUX0 539 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-204ENST00000394164 PPRC1Q5VV67 1664 aaKnown RBP12.85□□□□□ -0.35
PSEN1-204ENST00000394164 IDI1Q13907 227 aa12.84□□□□□ -0.35
PSEN1-204ENST00000394164 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-204ENST00000394164 DEPDC5O75140 1603 aa12.84□□□□□ -0.35
PSEN1-204ENST00000394164 ABCA6Q8N139 1617 aa12.84□□□□□ -0.35
PSEN1-204ENST00000394164 ARAP3Q8WWN8 1544 aa12.84□□□□□ -0.35
PSEN1-204ENST00000394164 STAC3Q96MF2 364 aa12.83□□□□□ -0.35
PSEN1-204ENST00000394164 MROH2AA6NES4 1674 aa12.83□□□□□ -0.36
PSEN1-204ENST00000394164 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-204ENST00000394164 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
PSEN1-204ENST00000394164 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms