RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 TULP4Q9NRJ4 1543 aa10.75□□□□□ -0.69
GAPVD1-207ENST00000394105 HNRNPUQ00839 825 aaKnown RBP eCLIP10.75□□□□□ -0.69
GAPVD1-207ENST00000394105 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
GAPVD1-207ENST00000394105 RIMBP3CA6NJZ7 1639 aa10.75□□□□□ -0.69
GAPVD1-207ENST00000394105 RIMBP3BA6NNM3 1639 aa10.75□□□□□ -0.69
GAPVD1-207ENST00000394105 RIMBP3Q9UFD9 1639 aa10.75□□□□□ -0.69
GAPVD1-207ENST00000394105 AMER1Q5JTC6 1135 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 PREX1Q8TCU6 1659 aa10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 PIK3C2GO75747 1445 aa10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 POGZQ7Z3K3 1410 aa10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 ADGRL1O94910 1474 aa10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 KDM5AP29375 1690 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 CD163L1Q9NR16 1453 aa10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 MLH3Q9UHC1 1453 aa10.74□□□□□ -0.69
GAPVD1-207ENST00000394105 NLRP1Q9C000 1473 aa10.73□□□□□ -0.69
GAPVD1-207ENST00000394105 PLEKHH1Q9ULM0 1364 aa10.73□□□□□ -0.69
GAPVD1-207ENST00000394105 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
GAPVD1-207ENST00000394105 USP32Q8NFA0 1604 aa10.73□□□□□ -0.69
GAPVD1-207ENST00000394105 NOS1P29475 1434 aa10.73□□□□□ -0.69
GAPVD1-207ENST00000394105 ADGRF5Q8IZF2 1346 aa10.73□□□□□ -0.69
GAPVD1-207ENST00000394105 DMRT2Q9Y5R5 561 aa10.72□□□□□ -0.69
GAPVD1-207ENST00000394105 CLTCQ00610 1675 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-207ENST00000394105 GLI2P10070 1586 aa10.72□□□□□ -0.69
GAPVD1-207ENST00000394105 SPINK5Q9NQ38 1064 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-207ENST00000394105 ROCK2O75116 1388 aaKnown RBP10.71□□□□□ -0.69
GAPVD1-207ENST00000394105 KDM2AQ9Y2K7 1162 aa10.71□□□□□ -0.69
GAPVD1-207ENST00000394105 DIP2BQ9P265 1576 aa10.7□□□□□ -0.7
GAPVD1-207ENST00000394105 YEATS2Q9ULM3 1422 aa10.7□□□□□ -0.7
GAPVD1-207ENST00000394105 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
GAPVD1-207ENST00000394105 GOLGB1Q14789 3259 aaKnown RBP10.69□□□□□ -0.7
GAPVD1-207ENST00000394105 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
GAPVD1-207ENST00000394105 PTPRMP28827 1452 aa10.69□□□□□ -0.7
GAPVD1-207ENST00000394105 IQSEC2Q5JU85 1478 aa10.69□□□□□ -0.7
GAPVD1-207ENST00000394105 FAM9BQ8IZU0 186 aa10.69□□□□□ -0.7
GAPVD1-207ENST00000394105 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-207ENST00000394105 RSPH4AQ5TD94 716 aa10.68□□□□□ -0.7
GAPVD1-207ENST00000394105 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
GAPVD1-207ENST00000394105 SCAF11Q99590 1463 aaKnown RBP10.67□□□□□ -0.7
GAPVD1-207ENST00000394105 RGL3Q3MIN7 710 aa10.67□□□□□ -0.7
GAPVD1-207ENST00000394105 BRD4O60885 1362 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-207ENST00000394105 MRS2Q9HD23 443 aa10.67□□□□□ -0.7
GAPVD1-207ENST00000394105 TSPY4P0CV99 314 aa10.66□□□□□ -0.7
GAPVD1-207ENST00000394105 TSPY10P0CW01 314 aa10.66□□□□□ -0.7
GAPVD1-207ENST00000394105 MARF1Q9Y4F3 1742 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-207ENST00000394105 COL3A1P02461 1466 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-207ENST00000394105 ADGRB2O60241 1585 aa10.65□□□□□ -0.7
GAPVD1-207ENST00000394105 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-207ENST00000394105 TRMT2AQ8IZ69 625 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-207ENST00000394105 INSRP06213 1382 aa10.63□□□□□ -0.71
GAPVD1-207ENST00000394105 MYBBP1AQ9BQG0 1328 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-207ENST00000394105 C20orf194Q5TEA3 1177 aa10.62□□□□□ -0.71
GAPVD1-207ENST00000394105 CFAP74Q9C0B2 1584 aa10.62□□□□□ -0.71
GAPVD1-207ENST00000394105 TSPOAP1O95153 1857 aa10.62□□□□□ -0.71
GAPVD1-207ENST00000394105 PANK3Q9H999 370 aa10.62□□□□□ -0.71
GAPVD1-207ENST00000394105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.61□□□□□ -0.714e-9■□□□□ 10.4
GAPVD1-207ENST00000394105 MED14O60244 1454 aa10.61□□□□□ -0.71
GAPVD1-207ENST00000394105 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
GAPVD1-207ENST00000394105 SBNO2Q9Y2G9 1366 aa10.6□□□□□ -0.71
GAPVD1-207ENST00000394105 EFCAB2Q5VUJ9 269 aa10.6□□□□□ -0.71
GAPVD1-207ENST00000394105 SPAG9O60271 1321 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-207ENST00000394105 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
GAPVD1-207ENST00000394105 PPP4R2Q9NY27 417 aa10.6□□□□□ -0.71
GAPVD1-207ENST00000394105 DLG5Q8TDM6 1919 aa10.6□□□□□ -0.71
GAPVD1-207ENST00000394105 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
GAPVD1-207ENST00000394105 ARHGAP31Q2M1Z3 1444 aa10.58□□□□□ -0.72
GAPVD1-207ENST00000394105 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-207ENST00000394105 CD109Q6YHK3 1445 aa10.58□□□□□ -0.72
GAPVD1-207ENST00000394105 NPC1L1Q9UHC9 1359 aa10.58□□□□□ -0.72
GAPVD1-207ENST00000394105 KTN1Q86UP2 1357 aaKnown RBP10.57□□□□□ -0.72
GAPVD1-207ENST00000394105 ADAMTS8Q9UP79 889 aa10.57□□□□□ -0.72
GAPVD1-207ENST00000394105 NRKQ7Z2Y5 1582 aa10.57□□□□□ -0.72
GAPVD1-207ENST00000394105 RAPGEF3O95398 923 aa10.57□□□□□ -0.72
GAPVD1-207ENST00000394105 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
GAPVD1-207ENST00000394105 NEO1Q92859 1461 aa10.56□□□□□ -0.72
GAPVD1-207ENST00000394105 KIF20BQ96Q89 1820 aa10.55□□□□□ -0.72
GAPVD1-207ENST00000394105 CNGB1Q14028 1251 aaPredicted RBP10.55□□□□□ -0.72
GAPVD1-207ENST00000394105 SPATA31D1Q6ZQQ2 1576 aa10.55□□□□□ -0.72
GAPVD1-207ENST00000394105 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
GAPVD1-207ENST00000394105 MAP2P11137 1827 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-207ENST00000394105 KDM2BQ8NHM5 1336 aa10.54□□□□□ -0.72
GAPVD1-207ENST00000394105 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.54□□□□□ -0.72
GAPVD1-207ENST00000394105 AKAP12Q02952 1782 aa10.54□□□□□ -0.72
GAPVD1-207ENST00000394105 ARHGEF40Q8TER5 1519 aa10.54□□□□□ -0.72
GAPVD1-207ENST00000394105 ALKQ9UM73 1620 aa10.54□□□□□ -0.72
GAPVD1-207ENST00000394105 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
GAPVD1-207ENST00000394105 RGPD8O14715 1765 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-207ENST00000394105 MON2Q7Z3U7 1717 aa10.53□□□□□ -0.72
GAPVD1-207ENST00000394105 C3P01024 1663 aa10.52□□□□□ -0.72
GAPVD1-207ENST00000394105 KIF3BO15066 747 aa10.52□□□□□ -0.73
GAPVD1-207ENST00000394105 UBR1Q8IWV7 1749 aa10.52□□□□□ -0.73
GAPVD1-207ENST00000394105 CC2D1BQ5T0F9 858 aaKnown RBP10.52□□□□□ -0.73
GAPVD1-207ENST00000394105 PLIN1O60240 522 aa10.52□□□□□ -0.73
GAPVD1-207ENST00000394105 EXOC6Q8TAG9 804 aa10.51□□□□□ -0.73
GAPVD1-207ENST00000394105 WASHC2CQ9Y4E1 1318 aa10.51□□□□□ -0.73
GAPVD1-207ENST00000394105 PEAK1Q9H792 1746 aa10.51□□□□□ -0.73
GAPVD1-207ENST00000394105 RGPD1P0DJD0 1748 aa10.51□□□□□ -0.73
GAPVD1-207ENST00000394105 KNDC1Q76NI1 1749 aa10.51□□□□□ -0.73
GAPVD1-207ENST00000394105 NLRP13Q86W25 1043 aa10.51□□□□□ -0.73
GAPVD1-207ENST00000394105 CDC42BPGQ6DT37 1551 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms