RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
SMAD1-202ENST00000394092 MYOM2P54296 1465 aa9.76□□□□□ -0.85
SMAD1-202ENST00000394092 WASHC2CQ9Y4E1 1318 aa9.76□□□□□ -0.85
SMAD1-202ENST00000394092 PPRC1Q5VV67 1664 aaKnown RBP9.76□□□□□ -0.85
SMAD1-202ENST00000394092 EIF3AQ14152 1382 aaKnown RBP9.76□□□□□ -0.85
SMAD1-202ENST00000394092 POGZQ7Z3K3 1410 aa9.76□□□□□ -0.85
SMAD1-202ENST00000394092 TMF1P82094 1093 aa9.76□□□□□ -0.85
SMAD1-202ENST00000394092 SP7Q8TDD2 431 aaPredicted RBP9.76□□□□□ -0.85
SMAD1-202ENST00000394092 MAP3K4Q9Y6R4 1608 aa9.75□□□□□ -0.85
SMAD1-202ENST00000394092 CD109Q6YHK3 1445 aa9.75□□□□□ -0.85
SMAD1-202ENST00000394092 SCAF11Q99590 1463 aaKnown RBP9.75□□□□□ -0.85
SMAD1-202ENST00000394092 MLH3Q9UHC1 1453 aa9.75□□□□□ -0.85
SMAD1-202ENST00000394092 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
SMAD1-202ENST00000394092 BCANQ96GW7 911 aa9.75□□□□□ -0.85
SMAD1-202ENST00000394092 SYNMO15061 1565 aa9.75□□□□□ -0.85
SMAD1-202ENST00000394092 NEO1Q92859 1461 aa9.74□□□□□ -0.85
SMAD1-202ENST00000394092 ZMYM4Q5VZL5 1548 aa9.74□□□□□ -0.85
SMAD1-202ENST00000394092 KIF3BO15066 747 aa9.74□□□□□ -0.85
SMAD1-202ENST00000394092 NBPF1Q3BBV0 1214 aa9.74□□□□□ -0.85
SMAD1-202ENST00000394092 PARD3Q8TEW0 1356 aa9.74□□□□□ -0.85
SMAD1-202ENST00000394092 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
SMAD1-202ENST00000394092 KDM5AP29375 1690 aaKnown RBP9.73□□□□□ -0.85
SMAD1-202ENST00000394092 SMG6Q86US8 1419 aaKnown RBP9.73□□□□□ -0.85
SMAD1-202ENST00000394092 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
SMAD1-202ENST00000394092 TESK2Q96S53 571 aa9.73□□□□□ -0.85
SMAD1-202ENST00000394092 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
SMAD1-202ENST00000394092 MROH2AA6NES4 1674 aa9.72□□□□□ -0.85
SMAD1-202ENST00000394092 ZC3H13Q5T200 1668 aaKnown RBP9.72□□□□□ -0.85
SMAD1-202ENST00000394092 NLRP13Q86W25 1043 aa9.72□□□□□ -0.85
SMAD1-202ENST00000394092 LRPPRCP42704 1394 aaKnown RBP9.72□□□□□ -0.85
SMAD1-202ENST00000394092 DISP3Q9P2K9 1392 aa9.72□□□□□ -0.85
SMAD1-202ENST00000394092 INSRP06213 1382 aa9.71□□□□□ -0.85
SMAD1-202ENST00000394092 ADGRB3O60242 1522 aa9.71□□□□□ -0.85
SMAD1-202ENST00000394092 FRMPD1Q5SYB0 1578 aa9.71□□□□□ -0.85
SMAD1-202ENST00000394092 MYO3AQ8NEV4 1616 aa9.71□□□□□ -0.85
SMAD1-202ENST00000394092 PNISRQ8TF01 805 aaKnown RBP9.71□□□□□ -0.86
SMAD1-202ENST00000394092 PPLO60437 1756 aa9.7□□□□□ -0.86
SMAD1-202ENST00000394092 CAMSAP1Q5T5Y3 1602 aa9.7□□□□□ -0.86
SMAD1-202ENST00000394092 SETBP1Q9Y6X0 1596 aa9.7□□□□□ -0.86
SMAD1-202ENST00000394092 RICTORQ6R327 1708 aa9.69□□□□□ -0.86
SMAD1-202ENST00000394092 MYOM1P52179 1685 aa9.69□□□□□ -0.86
SMAD1-202ENST00000394092 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
SMAD1-202ENST00000394092 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
SMAD1-202ENST00000394092 NUDCQ9Y266 331 aa9.69□□□□□ -0.86
SMAD1-202ENST00000394092 NRXN1Q9ULB1 1477 aa9.69□□□□□ -0.86
SMAD1-202ENST00000394092 CNGB1Q14028 1251 aaPredicted RBP9.68□□□□□ -0.86
SMAD1-202ENST00000394092 PPP4R2Q9NY27 417 aa9.68□□□□□ -0.86
SMAD1-202ENST00000394092 UGGT1Q9NYU2 1555 aa9.68□□□□□ -0.86
SMAD1-202ENST00000394092 ABCC3O15438 1527 aa9.68□□□□□ -0.86
SMAD1-202ENST00000394092 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
SMAD1-202ENST00000394092 GLI2P10070 1586 aa9.67□□□□□ -0.86
SMAD1-202ENST00000394092 DIP2CQ9Y2E4 1556 aa9.67□□□□□ -0.86
SMAD1-202ENST00000394092 CFAP65Q6ZU64 1925 aaKnown RBP9.66□□□□□ -0.86
SMAD1-202ENST00000394092 PANK3Q9H999 370 aa9.66□□□□□ -0.86
SMAD1-202ENST00000394092 NPATQ14207 1427 aa9.66□□□□□ -0.86
SMAD1-202ENST00000394092 PIK3C2BO00750 1634 aa9.66□□□□□ -0.86
SMAD1-202ENST00000394092 ASXL1Q8IXJ9 1541 aa9.65□□□□□ -0.86
SMAD1-202ENST00000394092 SBNO2Q9Y2G9 1366 aa9.65□□□□□ -0.86
SMAD1-202ENST00000394092 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
SMAD1-202ENST00000394092 BLMP54132 1417 aaPredicted RBP9.64□□□□□ -0.87
SMAD1-202ENST00000394092 NPC1L1Q9UHC9 1359 aa9.64□□□□□ -0.87
SMAD1-202ENST00000394092 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
SMAD1-202ENST00000394092 KNSTRNQ9Y448 316 aa9.64□□□□□ -0.87
SMAD1-202ENST00000394092 ARHGAP31Q2M1Z3 1444 aa9.63□□□□□ -0.87
SMAD1-202ENST00000394092 QRICH2Q9H0J4 1663 aa9.63□□□□□ -0.87
SMAD1-202ENST00000394092 SIGLEC1Q9BZZ2 1709 aa9.63□□□□□ -0.87
SMAD1-202ENST00000394092 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
SMAD1-202ENST00000394092 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
SMAD1-202ENST00000394092 NOS1P29475 1434 aa9.62□□□□□ -0.87
SMAD1-202ENST00000394092 IRX6P78412 446 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-202ENST00000394092 MYT1Q01538 1121 aa9.62□□□□□ -0.87
SMAD1-202ENST00000394092 SAMD1Q6SPF0 538 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-202ENST00000394092 CC2D1BQ5T0F9 858 aaKnown RBP9.61□□□□□ -0.87
SMAD1-202ENST00000394092 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
SMAD1-202ENST00000394092 GGT6Q6P531 493 aa9.61□□□□□ -0.87
SMAD1-202ENST00000394092 ADGRF5Q8IZF2 1346 aa9.6□□□□□ -0.87
SMAD1-202ENST00000394092 PREX1Q8TCU6 1659 aa9.6□□□□□ -0.87
SMAD1-202ENST00000394092 ADGRB1O14514 1584 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 DIP2BQ9P265 1576 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 RIMBP3CA6NJZ7 1639 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 RIMBP3BA6NNM3 1639 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 RIMBP3Q9UFD9 1639 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 CFAP70Q5T0N1 1121 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 ARHGEF28Q8N1W1 1705 aaKnown RBP9.59□□□□□ -0.87
SMAD1-202ENST00000394092 USP32Q8NFA0 1604 aa9.59□□□□□ -0.87
SMAD1-202ENST00000394092 NEXMIFQ5QGS0 1516 aa9.58□□□□□ -0.88
SMAD1-202ENST00000394092 CHGAP10645 457 aaKnown RBP9.58□□□□□ -0.88
SMAD1-202ENST00000394092 CENPJQ9HC77 1338 aaPredicted RBP9.58□□□□□ -0.88
SMAD1-202ENST00000394092 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
SMAD1-202ENST00000394092 WDR43Q15061 677 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMAD1-202ENST00000394092 ZFYVE9O95405 1425 aa9.56□□□□□ -0.88
SMAD1-202ENST00000394092 MYO5BQ9ULV0 1848 aa9.56□□□□□ -0.88
SMAD1-202ENST00000394092 RAPGEF3O95398 923 aa9.56□□□□□ -0.88
SMAD1-202ENST00000394092 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
SMAD1-202ENST00000394092 C14orf93Q9H972 538 aaKnown RBP9.56□□□□□ -0.88
SMAD1-202ENST00000394092 VGFO15240 615 aaPredicted RBP9.55□□□□□ -0.88
SMAD1-202ENST00000394092 SLC52A1Q9NWF4 448 aa9.55□□□□□ -0.88
SMAD1-202ENST00000394092 YEATS2Q9ULM3 1422 aa9.55□□□□□ -0.88
SMAD1-202ENST00000394092 AGLP35573 1532 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms