RNA–Protein interactions for RNA: ENST00000393125.6

GRIA4-202, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best) BASIC

Gene GRIA4, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-202ENST00000393125 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
GRIA4-202ENST00000393125 ATP10AO60312 1499 aa17.15■□□□□ 0.34
GRIA4-202ENST00000393125 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
GRIA4-202ENST00000393125 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
GRIA4-202ENST00000393125 TMEM132EQ6IEE7 984 aa17.15■□□□□ 0.34
GRIA4-202ENST00000393125 UGGT1Q9NYU2 1555 aa17.14■□□□□ 0.33
GRIA4-202ENST00000393125 ABCC1P33527 1531 aa17.14■□□□□ 0.33
GRIA4-202ENST00000393125 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
GRIA4-202ENST00000393125 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
GRIA4-202ENST00000393125 EIF2AK4Q9P2K8 1649 aaKnown RBP17.13■□□□□ 0.33
GRIA4-202ENST00000393125 RGS3P49796 1198 aa17.13■□□□□ 0.33
GRIA4-202ENST00000393125 CARD14Q9BXL6 1004 aa17.13■□□□□ 0.33
GRIA4-202ENST00000393125 FANCAO15360 1455 aa17.12■□□□□ 0.33
GRIA4-202ENST00000393125 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
GRIA4-202ENST00000393125 BCAR3O75815 825 aa17.12■□□□□ 0.33
GRIA4-202ENST00000393125 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
GRIA4-202ENST00000393125 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
GRIA4-202ENST00000393125 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
GRIA4-202ENST00000393125 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
GRIA4-202ENST00000393125 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
GRIA4-202ENST00000393125 SLC4A3P48751 1232 aa17.1■□□□□ 0.33
GRIA4-202ENST00000393125 SLC12A5Q9H2X9 1139 aa17.09■□□□□ 0.33
GRIA4-202ENST00000393125 ADGRL1O94910 1474 aa17.08■□□□□ 0.32
GRIA4-202ENST00000393125 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
GRIA4-202ENST00000393125 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
GRIA4-202ENST00000393125 CFAP65Q6ZU64 1925 aaKnown RBP17.07■□□□□ 0.32
GRIA4-202ENST00000393125 MADDQ8WXG6 1647 aa17.06■□□□□ 0.32
GRIA4-202ENST00000393125 SLFN5Q08AF3 891 aa17.06■□□□□ 0.32
GRIA4-202ENST00000393125 ZFYVE16Q7Z3T8 1539 aa17.06■□□□□ 0.32
GRIA4-202ENST00000393125 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
GRIA4-202ENST00000393125 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
GRIA4-202ENST00000393125 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
GRIA4-202ENST00000393125 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
GRIA4-202ENST00000393125 MORC1Q86VD1 984 aa17.05■□□□□ 0.32
GRIA4-202ENST00000393125 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
GRIA4-202ENST00000393125 TRPM2O94759 1503 aa17.04■□□□□ 0.32
GRIA4-202ENST00000393125 ASXL1Q8IXJ9 1541 aa17.03■□□□□ 0.32
GRIA4-202ENST00000393125 RTEL1-TNFRSF6BF6WH68 1400 aa17.03■□□□□ 0.32
GRIA4-202ENST00000393125 PTPRTO14522 1441 aa17.03■□□□□ 0.32
GRIA4-202ENST00000393125 LAMC1P11047 1609 aa17.03■□□□□ 0.32
GRIA4-202ENST00000393125 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
GRIA4-202ENST00000393125 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.32
GRIA4-202ENST00000393125 CENPJQ9HC77 1338 aaPredicted RBP17.02■□□□□ 0.32
GRIA4-202ENST00000393125 MS4A1P11836 297 aa17.02■□□□□ 0.31
GRIA4-202ENST00000393125 NEFMP07197 916 aa17.01■□□□□ 0.31
GRIA4-202ENST00000393125 STK26Q9P289 416 aa17.01■□□□□ 0.31
GRIA4-202ENST00000393125 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
GRIA4-202ENST00000393125 NOS1P29475 1434 aa17.01■□□□□ 0.31
GRIA4-202ENST00000393125 RAPGEF3O95398 923 aa17.01■□□□□ 0.31
GRIA4-202ENST00000393125 UHRF1BP1LA0JNW5 1464 aa17■□□□□ 0.31
GRIA4-202ENST00000393125 STAC3Q96MF2 364 aa17■□□□□ 0.31
GRIA4-202ENST00000393125 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
GRIA4-202ENST00000393125 ASXL2Q76L83 1435 aa16.99■□□□□ 0.31
GRIA4-202ENST00000393125 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
GRIA4-202ENST00000393125 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
GRIA4-202ENST00000393125 COG6Q9Y2V7 657 aa16.99■□□□□ 0.31
GRIA4-202ENST00000393125 CENPQQ7L2Z9 268 aaPredicted RBP16.98■□□□□ 0.31
GRIA4-202ENST00000393125 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
GRIA4-202ENST00000393125 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
GRIA4-202ENST00000393125 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
GRIA4-202ENST00000393125 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
GRIA4-202ENST00000393125 E9PSI1 815 aa16.96■□□□□ 0.31
GRIA4-202ENST00000393125 MTHFSP49914 203 aa16.96■□□□□ 0.31
GRIA4-202ENST00000393125 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
GRIA4-202ENST00000393125 WWC1Q8IX03 1113 aa16.96■□□□□ 0.31
GRIA4-202ENST00000393125 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
GRIA4-202ENST00000393125 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
GRIA4-202ENST00000393125 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.31
GRIA4-202ENST00000393125 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
GRIA4-202ENST00000393125 SYNMO15061 1565 aa16.94■□□□□ 0.3
GRIA4-202ENST00000393125 IGHDP01880 384 aa16.94■□□□□ 0.3
GRIA4-202ENST00000393125 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
GRIA4-202ENST00000393125 CEP152O94986 1710 aa16.94■□□□□ 0.3
GRIA4-202ENST00000393125 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
GRIA4-202ENST00000393125 TET3O43151 1660 aa16.93■□□□□ 0.3
GRIA4-202ENST00000393125 INSRP06213 1382 aa16.93■□□□□ 0.3
GRIA4-202ENST00000393125 U2AF1L5P0DN76 240 aaPredicted RBP16.92■□□□□ 0.3
GRIA4-202ENST00000393125 U2AF1Q01081 240 aaKnown RBP eCLIP16.92■□□□□ 0.3
GRIA4-202ENST00000393125 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
GRIA4-202ENST00000393125 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
GRIA4-202ENST00000393125 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
GRIA4-202ENST00000393125 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
GRIA4-202ENST00000393125 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
GRIA4-202ENST00000393125 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
GRIA4-202ENST00000393125 ABCA6Q8N139 1617 aa16.9■□□□□ 0.3
GRIA4-202ENST00000393125 KDM5AP29375 1690 aaKnown RBP16.9■□□□□ 0.3
GRIA4-202ENST00000393125 SLC24A1O60721 1099 aa16.89■□□□□ 0.3
GRIA4-202ENST00000393125 MYOM1P52179 1685 aa16.89■□□□□ 0.29
GRIA4-202ENST00000393125 C8orf34Q49A92 452 aa16.89■□□□□ 0.29
GRIA4-202ENST00000393125 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
GRIA4-202ENST00000393125 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
GRIA4-202ENST00000393125 NPATQ14207 1427 aa16.88■□□□□ 0.29
GRIA4-202ENST00000393125 CD109Q6YHK3 1445 aa16.88■□□□□ 0.29
GRIA4-202ENST00000393125 INO80Q9ULG1 1556 aaPredicted RBP16.88■□□□□ 0.29
GRIA4-202ENST00000393125 NPC1L1Q9UHC9 1359 aa16.88■□□□□ 0.29
GRIA4-202ENST00000393125 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
GRIA4-202ENST00000393125 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
GRIA4-202ENST00000393125 DEPDC5O75140 1603 aa16.86■□□□□ 0.29
GRIA4-202ENST00000393125 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
GRIA4-202ENST00000393125 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms