RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 SLC4A10Q6U841 1118 aa21.03■□□□□ 0.96
SNX9-201ENST00000392185 DDRGK1Q96HY6 314 aa21.03■□□□□ 0.96
SNX9-201ENST00000392185 WDR62O43379 1518 aa21.03■□□□□ 0.96
SNX9-201ENST00000392185 KIAA0556O60303 1618 aa21.03■□□□□ 0.96
SNX9-201ENST00000392185 PSME1Q06323 249 aa21.02■□□□□ 0.96
SNX9-201ENST00000392185 ADGRF5Q8IZF2 1346 aa21.02■□□□□ 0.96
SNX9-201ENST00000392185 CABP1Q9NZU7 370 aa21.02■□□□□ 0.96
SNX9-201ENST00000392185 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
SNX9-201ENST00000392185 E9PSI1 815 aa21■□□□□ 0.95
SNX9-201ENST00000392185 RIPK4P57078 832 aa21■□□□□ 0.95
SNX9-201ENST00000392185 STK31Q9BXU1 1019 aa21■□□□□ 0.95
SNX9-201ENST00000392185 CEBPAP49715 358 aaPredicted RBP21■□□□□ 0.95
SNX9-201ENST00000392185 ASXL2Q76L83 1435 aa21■□□□□ 0.95
SNX9-201ENST00000392185 RRP1P56182 461 aaKnown RBP21■□□□□ 0.95
SNX9-201ENST00000392185 CDK19Q9BWU1 502 aa20.99■□□□□ 0.95
SNX9-201ENST00000392185 COG6Q9Y2V7 657 aa20.99■□□□□ 0.95
SNX9-201ENST00000392185 NUP160Q12769 1436 aa20.99■□□□□ 0.95
SNX9-201ENST00000392185 LMOD3Q0VAK6 560 aa20.98■□□□□ 0.95
SNX9-201ENST00000392185 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
SNX9-201ENST00000392185 NLRP6P59044 892 aa20.97■□□□□ 0.95
SNX9-201ENST00000392185 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
SNX9-201ENST00000392185 PLCH2O75038 1416 aa20.97■□□□□ 0.95
SNX9-201ENST00000392185 RPRD2Q5VT52 1461 aaKnown RBP20.97■□□□□ 0.95
SNX9-201ENST00000392185 RWDD1Q9H446 243 aaPredicted RBP20.97■□□□□ 0.95
SNX9-201ENST00000392185 TSHZ2Q9NRE2 1034 aa20.97■□□□□ 0.95
SNX9-201ENST00000392185 THEMISQ8N1K5 641 aaPredicted RBP20.96■□□□□ 0.95
SNX9-201ENST00000392185 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
SNX9-201ENST00000392185 RUNDC1Q96C34 613 aa20.96■□□□□ 0.95
SNX9-201ENST00000392185 CCDC9Q9Y3X0 531 aaKnown RBP20.96■□□□□ 0.95
SNX9-201ENST00000392185 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
SNX9-201ENST00000392185 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
SNX9-201ENST00000392185 TRAPPC8Q9Y2L5 1435 aa20.94■□□□□ 0.94
SNX9-201ENST00000392185 CASC1Q6TDU7 716 aa20.94■□□□□ 0.94
SNX9-201ENST00000392185 TCP11L2Q8N4U5 519 aa20.94■□□□□ 0.94
SNX9-201ENST00000392185 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
SNX9-201ENST00000392185 NPHP1O15259 732 aa20.93■□□□□ 0.94
SNX9-201ENST00000392185 MAPKBP1O60336 1514 aa20.92■□□□□ 0.94
SNX9-201ENST00000392185 DENND4BO75064 1496 aaPredicted RBP20.92■□□□□ 0.94
SNX9-201ENST00000392185 RPGRIP1LQ68CZ1 1315 aa20.92■□□□□ 0.94
SNX9-201ENST00000392185 SYCP2Q9BX26 1530 aa20.91■□□□□ 0.94
SNX9-201ENST00000392185 NECTIN2Q92692 538 aa20.91■□□□□ 0.94
SNX9-201ENST00000392185 TPRNQ4KMQ1 711 aa20.88■□□□□ 0.93
SNX9-201ENST00000392185 SPRYD3Q8NCJ5 442 aa20.88■□□□□ 0.93
SNX9-201ENST00000392185 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
SNX9-201ENST00000392185 PROSER2Q86WR7 435 aaPredicted RBP20.88■□□□□ 0.93
SNX9-201ENST00000392185 ESCO1Q5FWF5 840 aa20.87■□□□□ 0.93
SNX9-201ENST00000392185 TEFQ10587 303 aa20.87■□□□□ 0.93
SNX9-201ENST00000392185 ZKSCAN2Q63HK3 967 aa20.87■□□□□ 0.93
SNX9-201ENST00000392185 ABTB2Q8N961 1025 aa20.87■□□□□ 0.93
SNX9-201ENST00000392185 ATF3P18847 181 aa20.86■□□□□ 0.93
SNX9-201ENST00000392185 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
SNX9-201ENST00000392185 RBM33Q96EV2 1170 aaKnown RBP20.85■□□□□ 0.93
SNX9-201ENST00000392185 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
SNX9-201ENST00000392185 PRKAR2BP31323 418 aa20.85■□□□□ 0.93
SNX9-201ENST00000392185 KCNJ4P48050 445 aa20.84■□□□□ 0.93
SNX9-201ENST00000392185 EIF2S2P20042 333 aaKnown RBP20.84■□□□□ 0.93
SNX9-201ENST00000392185 WDR7Q9Y4E6 1490 aa20.84■□□□□ 0.93
SNX9-201ENST00000392185 TAOK2Q9UL54 1235 aa20.83■□□□□ 0.92
SNX9-201ENST00000392185 ANP32BQ92688 251 aaKnown RBP20.82■□□□□ 0.92
SNX9-201ENST00000392185 RTEL1-TNFRSF6BF6WH68 1400 aa20.82■□□□□ 0.92
SNX9-201ENST00000392185 NOS1P29475 1434 aa20.82■□□□□ 0.92
SNX9-201ENST00000392185 C1orf141Q5JVX7 400 aa20.82■□□□□ 0.92
SNX9-201ENST00000392185 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
SNX9-201ENST00000392185 ANKLE2Q86XL3 938 aa20.81■□□□□ 0.92
SNX9-201ENST00000392185 TCOF1Q13428 1488 aaKnown RBP20.8■□□□□ 0.92
SNX9-201ENST00000392185 PANK1Q8TE04 598 aa20.8■□□□□ 0.92
SNX9-201ENST00000392185 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
SNX9-201ENST00000392185 EVA1CP58658 441 aa20.8■□□□□ 0.92
SNX9-201ENST00000392185 RRS1Q15050 365 aaKnown RBP20.8■□□□□ 0.92
SNX9-201ENST00000392185 NGEFQ8N5V2 710 aa20.8■□□□□ 0.92
SNX9-201ENST00000392185 CCDC61Q9Y6R9 512 aa20.79■□□□□ 0.92
SNX9-201ENST00000392185 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
SNX9-201ENST00000392185 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
SNX9-201ENST00000392185 NUDT16Q96DE0 195 aaKnown RBP20.78■□□□□ 0.92
SNX9-201ENST00000392185 CHMP3Q9Y3E7 222 aa20.78■□□□□ 0.92
SNX9-201ENST00000392185 NCLP19338 710 aaKnown RBP20.78■□□□□ 0.92
SNX9-201ENST00000392185 XPCQ01831 940 aaPredicted RBP20.78■□□□□ 0.92
SNX9-201ENST00000392185 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
SNX9-201ENST00000392185 NLRP2Q9NX02 1062 aa20.78■□□□□ 0.92
SNX9-201ENST00000392185 NSD3Q9BZ95 1437 aa20.77■□□□□ 0.92
SNX9-201ENST00000392185 TSR2Q969E8 191 aaKnown RBP20.77■□□□□ 0.92
SNX9-201ENST00000392185 MFAP1P55081 439 aaKnown RBP20.77■□□□□ 0.91
SNX9-201ENST00000392185 MAGI3Q5TCQ9 1506 aa20.76■□□□□ 0.91
SNX9-201ENST00000392185 DZIP1LQ8IYY4 767 aaKnown RBP20.76■□□□□ 0.91
SNX9-201ENST00000392185 ANP32EQ9BTT0 268 aa20.76■□□□□ 0.91
SNX9-201ENST00000392185 SULT6B1Q6IMI4 303 aa20.76■□□□□ 0.91
SNX9-201ENST00000392185 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
SNX9-201ENST00000392185 TSPYL4Q9UJ04 414 aa20.75■□□□□ 0.91
SNX9-201ENST00000392185 A2MP01023 1474 aa20.74■□□□□ 0.91
SNX9-201ENST00000392185 ABCC2Q92887 1545 aa20.74■□□□□ 0.91
SNX9-201ENST00000392185 FGD1P98174 961 aa20.74■□□□□ 0.91
SNX9-201ENST00000392185 C14orf93Q9H972 538 aaKnown RBP20.74■□□□□ 0.91
SNX9-201ENST00000392185 DISP3Q9P2K9 1392 aa20.74■□□□□ 0.91
SNX9-201ENST00000392185 SAMD9Q5K651 1589 aa20.74■□□□□ 0.91
SNX9-201ENST00000392185 HMMRO75330 724 aa20.74■□□□□ 0.91
SNX9-201ENST00000392185 CENPQQ7L2Z9 268 aaPredicted RBP20.73■□□□□ 0.91
SNX9-201ENST00000392185 GNAI1P63096 354 aa20.73■□□□□ 0.91
SNX9-201ENST00000392185 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
SNX9-201ENST00000392185 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
SNX9-201ENST00000392185 ANKRD45Q5TZF3 282 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms