RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 ERVK-7P63135 1459 aa17.04■□□□□ 0.32
TMCO1-202ENST00000392129 NRXN1Q9ULB1 1477 aa17.04■□□□□ 0.32
TMCO1-202ENST00000392129 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
TMCO1-202ENST00000392129 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
TMCO1-202ENST00000392129 CLTCQ00610 1675 aaKnown RBP17.04■□□□□ 0.32
TMCO1-202ENST00000392129 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
TMCO1-202ENST00000392129 CFAP70Q5T0N1 1121 aa17.03■□□□□ 0.32
TMCO1-202ENST00000392129 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
TMCO1-202ENST00000392129 TESK2Q96S53 571 aa17.01■□□□□ 0.31
TMCO1-202ENST00000392129 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
TMCO1-202ENST00000392129 VGFO15240 615 aaPredicted RBP17■□□□□ 0.31
TMCO1-202ENST00000392129 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
TMCO1-202ENST00000392129 PPLO60437 1756 aa16.99■□□□□ 0.31
TMCO1-202ENST00000392129 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
TMCO1-202ENST00000392129 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
TMCO1-202ENST00000392129 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
TMCO1-202ENST00000392129 PIK3C2GO75747 1445 aa16.98■□□□□ 0.31
TMCO1-202ENST00000392129 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
TMCO1-202ENST00000392129 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
TMCO1-202ENST00000392129 NEXMIFQ5QGS0 1516 aa16.97■□□□□ 0.31
TMCO1-202ENST00000392129 TMEM131LA2VDJ0 1609 aa16.96■□□□□ 0.31
TMCO1-202ENST00000392129 ZFYVE9O95405 1425 aa16.95■□□□□ 0.3
TMCO1-202ENST00000392129 IQGAP1P46940 1657 aa16.95■□□□□ 0.3
TMCO1-202ENST00000392129 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
TMCO1-202ENST00000392129 TMF1P82094 1093 aa16.94■□□□□ 0.3
TMCO1-202ENST00000392129 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
TMCO1-202ENST00000392129 EIF3AQ14152 1382 aaKnown RBP16.93■□□□□ 0.3
TMCO1-202ENST00000392129 DISP3Q9P2K9 1392 aa16.93■□□□□ 0.3
TMCO1-202ENST00000392129 SETBP1Q9Y6X0 1596 aa16.92■□□□□ 0.3
TMCO1-202ENST00000392129 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
TMCO1-202ENST00000392129 MYO5BQ9ULV0 1848 aa16.9■□□□□ 0.3
TMCO1-202ENST00000392129 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
TMCO1-202ENST00000392129 A2ML1A8K2U0 1454 aa16.9■□□□□ 0.3
TMCO1-202ENST00000392129 ADGRB1O14514 1584 aa16.89■□□□□ 0.29
TMCO1-202ENST00000392129 TMEM132EQ6IEE7 984 aa16.89■□□□□ 0.29
TMCO1-202ENST00000392129 TNRQ92752 1358 aa16.89■□□□□ 0.29
TMCO1-202ENST00000392129 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
TMCO1-202ENST00000392129 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
TMCO1-202ENST00000392129 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
TMCO1-202ENST00000392129 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
TMCO1-202ENST00000392129 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
TMCO1-202ENST00000392129 CENPJQ9HC77 1338 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-202ENST00000392129 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.28
TMCO1-202ENST00000392129 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMCO1-202ENST00000392129 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
TMCO1-202ENST00000392129 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
TMCO1-202ENST00000392129 HDGFP51858 240 aaKnown RBP16.8■□□□□ 0.28
TMCO1-202ENST00000392129 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
TMCO1-202ENST00000392129 PANK3Q9H999 370 aa16.8■□□□□ 0.28
TMCO1-202ENST00000392129 NLRP1Q9C000 1473 aa16.79■□□□□ 0.28
TMCO1-202ENST00000392129 FER1L4A9Z1Z3 1794 aa16.78■□□□□ 0.28
TMCO1-202ENST00000392129 ASXL1Q8IXJ9 1541 aa16.78■□□□□ 0.28
TMCO1-202ENST00000392129 ALKQ9UM73 1620 aa16.78■□□□□ 0.28
TMCO1-202ENST00000392129 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
TMCO1-202ENST00000392129 C3P01024 1663 aa16.77■□□□□ 0.27
TMCO1-202ENST00000392129 KDM5AP29375 1690 aaKnown RBP16.77■□□□□ 0.27
TMCO1-202ENST00000392129 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.27
TMCO1-202ENST00000392129 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
TMCO1-202ENST00000392129 STK26Q9P289 416 aa16.76■□□□□ 0.27
TMCO1-202ENST00000392129 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
TMCO1-202ENST00000392129 RALBP1Q15311 655 aa16.75■□□□□ 0.27
TMCO1-202ENST00000392129 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
TMCO1-202ENST00000392129 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
TMCO1-202ENST00000392129 UBR1Q8IWV7 1749 aa16.74■□□□□ 0.27
TMCO1-202ENST00000392129 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
TMCO1-202ENST00000392129 PTPRMP28827 1452 aa16.72■□□□□ 0.27
TMCO1-202ENST00000392129 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
TMCO1-202ENST00000392129 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
TMCO1-202ENST00000392129 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
TMCO1-202ENST00000392129 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
TMCO1-202ENST00000392129 PARD3Q8TEW0 1356 aa16.7■□□□□ 0.26
TMCO1-202ENST00000392129 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
TMCO1-202ENST00000392129 LTKP29376 864 aa16.7■□□□□ 0.26
TMCO1-202ENST00000392129 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
TMCO1-202ENST00000392129 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
TMCO1-202ENST00000392129 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
TMCO1-202ENST00000392129 SAFB2Q14151 953 aaKnown RBP eCLIP16.69■□□□□ 0.26
TMCO1-202ENST00000392129 POGKQ9P215 609 aa16.69■□□□□ 0.26
TMCO1-202ENST00000392129 NRXN3Q9Y4C0 1643 aa16.69■□□□□ 0.26
TMCO1-202ENST00000392129 TXNDC2Q86VQ3 553 aa16.68■□□□□ 0.26
TMCO1-202ENST00000392129 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
TMCO1-202ENST00000392129 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
TMCO1-202ENST00000392129 MYOM1P52179 1685 aa16.68■□□□□ 0.26
TMCO1-202ENST00000392129 BCANQ96GW7 911 aa16.68■□□□□ 0.26
TMCO1-202ENST00000392129 METP08581 1390 aa16.67■□□□□ 0.26
TMCO1-202ENST00000392129 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
TMCO1-202ENST00000392129 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
TMCO1-202ENST00000392129 EID1Q9Y6B2 187 aa16.67■□□□□ 0.26
TMCO1-202ENST00000392129 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
TMCO1-202ENST00000392129 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
TMCO1-202ENST00000392129 PLEKHG1Q9ULL1 1385 aa16.66■□□□□ 0.26
TMCO1-202ENST00000392129 RIMS1Q86UR5 1692 aaKnown RBP16.66■□□□□ 0.26
TMCO1-202ENST00000392129 SLIT1O75093 1534 aa16.66■□□□□ 0.26
TMCO1-202ENST00000392129 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
TMCO1-202ENST00000392129 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
TMCO1-202ENST00000392129 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
TMCO1-202ENST00000392129 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
TMCO1-202ENST00000392129 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
TMCO1-202ENST00000392129 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.26
TMCO1-202ENST00000392129 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms