RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PRR20CP86479 221 aa5.71□□□□□ -1.5
RNU6-239P-201ENST00000390990 PRR20DP86480 221 aa5.71□□□□□ -1.5
RNU6-239P-201ENST00000390990 PRR20BP86481 221 aa5.71□□□□□ -1.5
RNU6-239P-201ENST00000390990 PRR20AP86496 221 aa5.71□□□□□ -1.5
RNU6-239P-201ENST00000390990 EYA1Q99502 592 aa5.71□□□□□ -1.5
RNU6-239P-201ENST00000390990 ARIH1Q9Y4X5 557 aaPredicted RBP5.71□□□□□ -1.5
RNU6-239P-201ENST00000390990 TNFRSF10AO00220 468 aa5.7□□□□□ -1.5
RNU6-239P-201ENST00000390990 E2F4Q16254 413 aa5.7□□□□□ -1.5
RNU6-239P-201ENST00000390990 FAM187AA6NFU0 413 aa5.69□□□□□ -1.5
RNU6-239P-201ENST00000390990 ST8SIA5O15466 376 aa5.69□□□□□ -1.5
RNU6-239P-201ENST00000390990 GDF9O60383 454 aa5.69□□□□□ -1.5
RNU6-239P-201ENST00000390990 S1PR4O95977 384 aa5.69□□□□□ -1.5
RNU6-239P-201ENST00000390990 ZNF697Q5TEC3 545 aa5.69□□□□□ -1.5
RNU6-239P-201ENST00000390990 TREML4Q6UXN2 200 aa5.69□□□□□ -1.5
RNU6-239P-201ENST00000390990 ANKLE1Q8NAG6 615 aa5.69□□□□□ -1.5
RNU6-239P-201ENST00000390990 AAASQ9NRG9 546 aa5.68□□□□□ -1.5
RNU6-239P-201ENST00000390990 PRR14Q9BWN1 585 aa5.67□□□□□ -1.5
RNU6-239P-201ENST00000390990 SLC4A3P48751 1232 aa5.66□□□□□ -1.5
RNU6-239P-201ENST00000390990 PLA2G2CQ5R387 149 aa5.66□□□□□ -1.5
RNU6-239P-201ENST00000390990 DACH1Q9UI36 760 aa5.65□□□□□ -1.5
RNU6-239P-201ENST00000390990 ACTN4O43707 911 aaKnown RBP5.64□□□□□ -1.51
RNU6-239P-201ENST00000390990 BBXQ8WY36 941 aaPredicted RBP5.63□□□□□ -1.51
RNU6-239P-201ENST00000390990 PKD2L1Q9P0L9 805 aa5.63□□□□□ -1.51
RNU6-239P-201ENST00000390990 ADH1BP00325 375 aa5.62□□□□□ -1.51
RNU6-239P-201ENST00000390990 DNAJB2P25686 324 aa5.62□□□□□ -1.51
RNU6-239P-201ENST00000390990 TMEM134Q9H6X4 195 aa5.62□□□□□ -1.51
RNU6-239P-201ENST00000390990 CFHP08603 1231 aa5.61□□□□□ -1.51
RNU6-239P-201ENST00000390990 FOXC1Q12948 553 aa5.61□□□□□ -1.51
RNU6-239P-201ENST00000390990 KMT5BQ4FZB7 885 aa5.61□□□□□ -1.51
RNU6-239P-201ENST00000390990 WDR70Q9NW82 654 aa5.61□□□□□ -1.51
RNU6-239P-201ENST00000390990 RCCD1A6NED2 376 aa5.6□□□□□ -1.51
RNU6-239P-201ENST00000390990 WFS1O76024 890 aa5.6□□□□□ -1.51
RNU6-239P-201ENST00000390990 SLC10A3P09131 477 aa5.6□□□□□ -1.51
RNU6-239P-201ENST00000390990 FAM161AQ3B820 660 aa5.6□□□□□ -1.51
RNU6-239P-201ENST00000390990 CRIPAKQ8N1N5 446 aa5.6□□□□□ -1.51
RNU6-239P-201ENST00000390990 SLC6A16Q9GZN6 736 aa5.6□□□□□ -1.51
RNU6-239P-201ENST00000390990 ADGRG1Q9Y653 693 aa5.6□□□□□ -1.51
RNU6-239P-201ENST00000390990 NR1I2O75469 434 aa5.59□□□□□ -1.51
RNU6-239P-201ENST00000390990 PTGDRQ13258 359 aa5.59□□□□□ -1.51
RNU6-239P-201ENST00000390990 SCUBE3Q8IX30 993 aa5.59□□□□□ -1.51
RNU6-239P-201ENST00000390990 SPRYD3Q8NCJ5 442 aa5.59□□□□□ -1.51
RNU6-239P-201ENST00000390990 RBM46Q8TBY0 533 aaKnown RBP5.59□□□□□ -1.51
RNU6-239P-201ENST00000390990 GMPR2Q9P2T1 348 aaKnown RBP5.59□□□□□ -1.51
RNU6-239P-201ENST00000390990 AVPP01185 164 aa5.58□□□□□ -1.52
RNU6-239P-201ENST00000390990 MLLT3P42568 568 aaPredicted RBP5.58□□□□□ -1.52
RNU6-239P-201ENST00000390990 NFX1Q12986 1120 aaKnown RBP5.58□□□□□ -1.52
RNU6-239P-201ENST00000390990 TOR4AQ9NXH8 423 aa5.58□□□□□ -1.52
RNU6-239P-201ENST00000390990 C11orf95C9JLR9 678 aaPredicted RBP5.57□□□□□ -1.52
RNU6-239P-201ENST00000390990 PUS10Q3MIT2 529 aaKnown RBP5.57□□□□□ -1.52
RNU6-239P-201ENST00000390990 AXIN1O15169 862 aa5.56□□□□□ -1.52
RNU6-239P-201ENST00000390990 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
RNU6-239P-201ENST00000390990 LMOD2Q6P5Q4 547 aa5.56□□□□□ -1.52
RNU6-239P-201ENST00000390990 SPSB2Q99619 263 aa5.56□□□□□ -1.52
RNU6-239P-201ENST00000390990 WIPF1O43516 503 aa5.55□□□□□ -1.52
RNU6-239P-201ENST00000390990 STK17AQ9UEE5 414 aa5.55□□□□□ -1.52
RNU6-239P-201ENST00000390990 RPIAP49247 311 aa5.54□□□□□ -1.52
RNU6-239P-201ENST00000390990 SMCPP49901 116 aaPredicted RBP5.53□□□□□ -1.52
RNU6-239P-201ENST00000390990 CYP4X1Q8N118 509 aa5.53□□□□□ -1.52
RNU6-239P-201ENST00000390990 FCF1Q9Y324 198 aaKnown RBP5.53□□□□□ -1.52
RNU6-239P-201ENST00000390990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.52□□□□□ -1.53
RNU6-239P-201ENST00000390990 CD2BP2O95400 341 aaKnown RBP5.52□□□□□ -1.53
RNU6-239P-201ENST00000390990 SNRPBP14678 240 aaKnown RBP5.52□□□□□ -1.53
RNU6-239P-201ENST00000390990 CTC1Q2NKJ3 1217 aa5.52□□□□□ -1.53
RNU6-239P-201ENST00000390990 NUTM2FA1L443 756 aa5.51□□□□□ -1.53
RNU6-239P-201ENST00000390990 INSM1Q01101 510 aaPredicted RBP5.51□□□□□ -1.53
RNU6-239P-201ENST00000390990 FAM160A2Q8N612 972 aaPredicted RBP5.51□□□□□ -1.53
RNU6-239P-201ENST00000390990 THAP11Q96EK4 314 aa5.51□□□□□ -1.53
RNU6-239P-201ENST00000390990 CFAP44Q96MT7 982 aa5.51□□□□□ -1.53
RNU6-239P-201ENST00000390990 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.51□□□□□ -1.53
RNU6-239P-201ENST00000390990 MORN1Q5T089 497 aa5.5□□□□□ -1.53
RNU6-239P-201ENST00000390990 PAXIP1Q6ZW49 1069 aaPredicted RBP5.5□□□□□ -1.53
RNU6-239P-201ENST00000390990 PXYLP1Q8TE99 480 aa5.5□□□□□ -1.53
RNU6-239P-201ENST00000390990 TERTO14746 1132 aaKnown RBP5.49□□□□□ -1.53
RNU6-239P-201ENST00000390990 SMPD1P17405 629 aa5.49□□□□□ -1.53
RNU6-239P-201ENST00000390990 ATP13A2Q9NQ11 1180 aa5.49□□□□□ -1.53
RNU6-239P-201ENST00000390990 PRDM9Q9NQV7 894 aa5.49□□□□□ -1.53
RNU6-239P-201ENST00000390990 TTC24A2A3L6 582 aaPredicted RBP5.48□□□□□ -1.53
RNU6-239P-201ENST00000390990 FUT2Q10981 343 aa5.48□□□□□ -1.53
RNU6-239P-201ENST00000390990 ARHGEF1Q92888 912 aaKnown RBP5.48□□□□□ -1.53
RNU6-239P-201ENST00000390990 OATP04181 439 aa5.47□□□□□ -1.53
RNU6-239P-201ENST00000390990 SLC27A5Q9Y2P5 690 aa5.47□□□□□ -1.53
RNU6-239P-201ENST00000390990 J3QL48 77 aa5.46□□□□□ -1.54
RNU6-239P-201ENST00000390990 FCHSD2O94868 740 aa5.46□□□□□ -1.54
RNU6-239P-201ENST00000390990 METTL3Q86U44 580 aaKnown RBP5.46□□□□□ -1.54
RNU6-239P-201ENST00000390990 KCNV2Q8TDN2 545 aa5.46□□□□□ -1.54
RNU6-239P-201ENST00000390990 TRIM47Q96LD4 638 aa5.46□□□□□ -1.54
RNU6-239P-201ENST00000390990 WNT7AO00755 349 aa5.45□□□□□ -1.54
RNU6-239P-201ENST00000390990 FMNL1O95466 1100 aaPredicted RBP5.45□□□□□ -1.54
RNU6-239P-201ENST00000390990 RSPH4AQ5TD94 716 aa5.45□□□□□ -1.54
RNU6-239P-201ENST00000390990 BRICD5Q6PL45 260 aa5.45□□□□□ -1.54
RNU6-239P-201ENST00000390990 SNIP1Q8TAD8 396 aaKnown RBP5.45□□□□□ -1.54
RNU6-239P-201ENST00000390990 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 ZBTB24O43167 697 aaPredicted RBP5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 ATP6V1AP38606 617 aa5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 RDH13Q8NBN7 331 aa5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 NLRP7Q8WX94 980 aa5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 HPS1Q92902 700 aa5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 MRGPRX2Q96LB1 330 aa5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
RNU6-239P-201ENST00000390990 DDX11L8A8MPP1 907 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms