RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 RBM33Q96EV2 1170 aaKnown RBP4.72□□□□□ -1.65
RNU6-440P-201ENST00000390882 ATP13A2Q9NQ11 1180 aa4.72□□□□□ -1.65
RNU6-440P-201ENST00000390882 CYP4X1Q8N118 509 aa4.71□□□□□ -1.66
RNU6-440P-201ENST00000390882 TATDN2Q93075 761 aa4.71□□□□□ -1.66
RNU6-440P-201ENST00000390882 NXF1Q9UBU9 619 aaKnown RBP4.71□□□□□ -1.66
RNU6-440P-201ENST00000390882 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
RNU6-440P-201ENST00000390882 S1PR4O95977 384 aa4.7□□□□□ -1.66
RNU6-440P-201ENST00000390882 GSK3AP49840 483 aa4.7□□□□□ -1.66
RNU6-440P-201ENST00000390882 KIFC2Q96AC6 838 aa4.7□□□□□ -1.66
RNU6-440P-201ENST00000390882 PCDHB3Q9Y5E6 796 aa4.7□□□□□ -1.66
RNU6-440P-201ENST00000390882 NCKAP5LQ9HCH0 1330 aa4.7□□□□□ -1.66
RNU6-440P-201ENST00000390882 NBPF26B4DH59 902 aa4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 ECM2O94769 699 aaPredicted RBP4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 NPAS3Q8IXF0 933 aa4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 CDCA7LQ96GN5 454 aa4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 DDX27Q96GQ7 796 aaKnown RBP4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 PRR14Q9BWN1 585 aa4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 EMILIN3Q9NT22 766 aa4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 PNMA3Q9UL41 463 aa4.69□□□□□ -1.66
RNU6-440P-201ENST00000390882 GDF11O95390 407 aa4.68□□□□□ -1.66
RNU6-440P-201ENST00000390882 SLF2Q8IX21 1173 aa4.68□□□□□ -1.66
RNU6-440P-201ENST00000390882 PSMG3-AS1Q96PY0 264 aa4.68□□□□□ -1.66
RNU6-440P-201ENST00000390882 LARP6Q9BRS8 491 aaKnown RBP4.68□□□□□ -1.66
RNU6-440P-201ENST00000390882 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
RNU6-440P-201ENST00000390882 PRSS12P56730 875 aa4.67□□□□□ -1.66
RNU6-440P-201ENST00000390882 BLOC1S3Q6QNY0 202 aa4.67□□□□□ -1.66
RNU6-440P-201ENST00000390882 FAM198AQ9UFP1 575 aa4.67□□□□□ -1.66
RNU6-440P-201ENST00000390882 TLL1O43897 1013 aa4.66□□□□□ -1.66
RNU6-440P-201ENST00000390882 PLA2G2CQ5R387 149 aa4.66□□□□□ -1.66
RNU6-440P-201ENST00000390882 TTC24A2A3L6 582 aaPredicted RBP4.65□□□□□ -1.67
RNU6-440P-201ENST00000390882 C3orf80F5H4A9 247 aa4.65□□□□□ -1.67
RNU6-440P-201ENST00000390882 CD2BP2O95400 341 aaKnown RBP4.65□□□□□ -1.67
RNU6-440P-201ENST00000390882 SLC4A3P48751 1232 aa4.65□□□□□ -1.67
RNU6-440P-201ENST00000390882 RASSF7Q02833 373 aa4.65□□□□□ -1.67
RNU6-440P-201ENST00000390882 RGL2O15211 777 aa4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 MAP3K7O43318 606 aa4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 RPIAP49247 311 aa4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 EN1Q05925 392 aaPredicted RBP4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 TSR1Q2NL82 804 aaKnown RBP4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 AMER1Q5JTC6 1135 aaPredicted RBP4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 SWT1Q5T5J6 900 aaKnown RBP4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 KRTAP1-3Q8IUG1 177 aa4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 CERKQ8TCT0 537 aa4.64□□□□□ -1.67
RNU6-440P-201ENST00000390882 H3BM21 787 aa4.63□□□□□ -1.67
RNU6-440P-201ENST00000390882 IGHA1P01876 353 aa4.63□□□□□ -1.67
RNU6-440P-201ENST00000390882 MFSD10Q14728 455 aa4.63□□□□□ -1.67
RNU6-440P-201ENST00000390882 NUDT18Q6ZVK8 323 aa4.63□□□□□ -1.67
RNU6-440P-201ENST00000390882 SLC6A16Q9GZN6 736 aa4.63□□□□□ -1.67
RNU6-440P-201ENST00000390882 ADH1BP00325 375 aa4.62□□□□□ -1.67
RNU6-440P-201ENST00000390882 RYDENQ9NUL5 291 aaKnown RBP4.62□□□□□ -1.67
RNU6-440P-201ENST00000390882 RNF225M0QZC1 329 aaPredicted RBP4.61□□□□□ -1.67
RNU6-440P-201ENST00000390882 DDX12PQ92771 950 aa4.61□□□□□ -1.67
RNU6-440P-201ENST00000390882 ERBB4Q15303 1308 aa4.61□□□□□ -1.67
RNU6-440P-201ENST00000390882 SMPD1P17405 629 aa4.6□□□□□ -1.67
RNU6-440P-201ENST00000390882 RTN4Q9NQC3 1192 aaKnown RBP4.6□□□□□ -1.67
RNU6-440P-201ENST00000390882 VEGFBP49765 207 aa4.59□□□□□ -1.67
RNU6-440P-201ENST00000390882 NBR1Q14596 966 aa4.59□□□□□ -1.67
RNU6-440P-201ENST00000390882 GPAT2Q6NUI2 795 aa4.59□□□□□ -1.67
RNU6-440P-201ENST00000390882 SNIP1Q8TAD8 396 aaKnown RBP4.59□□□□□ -1.67
RNU6-440P-201ENST00000390882 HS6ST3Q8IZP7 471 aa4.58□□□□□ -1.68
RNU6-440P-201ENST00000390882 RBM27Q9P2N5 1060 aaKnown RBP4.57□□□□□ -1.68
RNU6-440P-201ENST00000390882 ACTN4O43707 911 aaKnown RBP4.56□□□□□ -1.68
RNU6-440P-201ENST00000390882 NR1I2O75469 434 aa4.56□□□□□ -1.68
RNU6-440P-201ENST00000390882 FOXK2Q01167 660 aa4.56□□□□□ -1.68
RNU6-440P-201ENST00000390882 DNMT3AQ9Y6K1 912 aaPredicted RBP4.56□□□□□ -1.68
RNU6-440P-201ENST00000390882 DPYSL4O14531 572 aa4.55□□□□□ -1.68
RNU6-440P-201ENST00000390882 KMT5BQ4FZB7 885 aa4.55□□□□□ -1.68
RNU6-440P-201ENST00000390882 WNT7AO00755 349 aa4.54□□□□□ -1.68
RNU6-440P-201ENST00000390882 ADAM23O75077 832 aa4.54□□□□□ -1.68
RNU6-440P-201ENST00000390882 HPS1Q92902 700 aa4.54□□□□□ -1.68
RNU6-440P-201ENST00000390882 J3QL48 77 aa4.53□□□□□ -1.68
RNU6-440P-201ENST00000390882 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
RNU6-440P-201ENST00000390882 ADAMTS8Q9UP79 889 aa4.53□□□□□ -1.68
RNU6-440P-201ENST00000390882 ZBTB24O43167 697 aaPredicted RBP4.52□□□□□ -1.69
RNU6-440P-201ENST00000390882 VSIG8P0DPA2 414 aa4.52□□□□□ -1.69
RNU6-440P-201ENST00000390882 CAMK2BQ13554 666 aa4.52□□□□□ -1.69
RNU6-440P-201ENST00000390882 SPSB2Q99619 263 aa4.52□□□□□ -1.69
RNU6-440P-201ENST00000390882 PKD2Q13563 968 aa4.51□□□□□ -1.69
RNU6-440P-201ENST00000390882 SCUBE3Q8IX30 993 aa4.51□□□□□ -1.69
RNU6-440P-201ENST00000390882 FCF1Q9Y324 198 aaKnown RBP4.51□□□□□ -1.69
RNU6-440P-201ENST00000390882 NKX1-1Q15270 411 aaPredicted RBP4.5□□□□□ -1.69
RNU6-440P-201ENST00000390882 TTC13Q8NBP0 860 aa4.5□□□□□ -1.69
RNU6-440P-201ENST00000390882 EYA1Q99502 592 aa4.5□□□□□ -1.69
RNU6-440P-201ENST00000390882 DNAJC5Q9H3Z4 198 aa4.5□□□□□ -1.69
RNU6-440P-201ENST00000390882 BTBD11A6QL63 1104 aa4.49□□□□□ -1.69
RNU6-440P-201ENST00000390882 MRGPRX2Q96LB1 330 aa4.49□□□□□ -1.69
RNU6-440P-201ENST00000390882 IRS1P35568 1242 aa4.48□□□□□ -1.69
RNU6-440P-201ENST00000390882 KANK3Q6NY19 840 aa4.48□□□□□ -1.69
RNU6-440P-201ENST00000390882 Q8N3U1 123 aa4.48□□□□□ -1.69
RNU6-440P-201ENST00000390882 CFHP08603 1231 aa4.47□□□□□ -1.69
RNU6-440P-201ENST00000390882 CHGAP10645 457 aaKnown RBP4.47□□□□□ -1.69
RNU6-440P-201ENST00000390882 TRIM46Q7Z4K8 759 aa4.47□□□□□ -1.69
RNU6-440P-201ENST00000390882 PADI6Q6TGC4 694 aa4.46□□□□□ -1.7
RNU6-440P-201ENST00000390882 REPIN1Q9BWE0 567 aaKnown RBP4.46□□□□□ -1.7
RNU6-440P-201ENST00000390882 SPDYE16A6NNV3 312 aaPredicted RBP4.45□□□□□ -1.7
RNU6-440P-201ENST00000390882 MSTNO14793 375 aa4.45□□□□□ -1.7
RNU6-440P-201ENST00000390882 BMP1P13497 986 aa4.45□□□□□ -1.7
RNU6-440P-201ENST00000390882 PRIM1P49642 420 aaKnown RBP4.45□□□□□ -1.7
RNU6-440P-201ENST00000390882 PDIA6Q15084 440 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms