RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 CAMSAP2Q08AD1 1489 aa12.3□□□□□ -0.44
TRAV6-201ENST00000390428 TCOF1Q13428 1488 aaKnown RBP12.3□□□□□ -0.44
TRAV6-201ENST00000390428 CCDC141Q6ZP82 1450 aa12.3□□□□□ -0.44
TRAV6-201ENST00000390428 PKD2Q13563 968 aa12.3□□□□□ -0.44
TRAV6-201ENST00000390428 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
TRAV6-201ENST00000390428 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
TRAV6-201ENST00000390428 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
TRAV6-201ENST00000390428 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
TRAV6-201ENST00000390428 A2ML1A8K2U0 1454 aa12.28□□□□□ -0.44
TRAV6-201ENST00000390428 KIF3BO15066 747 aa12.28□□□□□ -0.44
TRAV6-201ENST00000390428 LHX8Q68G74 356 aa12.28□□□□□ -0.44
TRAV6-201ENST00000390428 ZNF335Q9H4Z2 1342 aaPredicted RBP12.28□□□□□ -0.44
TRAV6-201ENST00000390428 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
TRAV6-201ENST00000390428 FAM135AQ9P2D6 1515 aa12.27□□□□□ -0.44
TRAV6-201ENST00000390428 ARHGEF5Q12774 1597 aa12.27□□□□□ -0.44
TRAV6-201ENST00000390428 POLR1AO95602 1720 aaPredicted RBP12.27□□□□□ -0.45
TRAV6-201ENST00000390428 KDM5DQ9BY66 1539 aa12.27□□□□□ -0.45
TRAV6-201ENST00000390428 FBXO31Q5XUX0 539 aaPredicted RBP12.25□□□□□ -0.45
TRAV6-201ENST00000390428 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
TRAV6-201ENST00000390428 TNRQ92752 1358 aa12.25□□□□□ -0.45
TRAV6-201ENST00000390428 PZPP20742 1482 aa12.25□□□□□ -0.45
TRAV6-201ENST00000390428 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
TRAV6-201ENST00000390428 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
TRAV6-201ENST00000390428 WASHC2CQ9Y4E1 1318 aa12.24□□□□□ -0.45
TRAV6-201ENST00000390428 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
TRAV6-201ENST00000390428 LRRC9Q6ZRR7 1453 aa12.23□□□□□ -0.45
TRAV6-201ENST00000390428 TSPY4P0CV99 314 aa12.23□□□□□ -0.45
TRAV6-201ENST00000390428 TSPY10P0CW01 314 aa12.23□□□□□ -0.45
TRAV6-201ENST00000390428 ILDR2Q71H61 639 aa12.23□□□□□ -0.45
TRAV6-201ENST00000390428 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
TRAV6-201ENST00000390428 UBAP1LF5GYI3 381 aa12.22□□□□□ -0.45
TRAV6-201ENST00000390428 C7P10643 843 aa12.22□□□□□ -0.45
TRAV6-201ENST00000390428 TMEM106CQ9BVX2 250 aa12.22□□□□□ -0.45
TRAV6-201ENST00000390428 METRNQ9UJH8 293 aa12.22□□□□□ -0.45
TRAV6-201ENST00000390428 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
TRAV6-201ENST00000390428 CFAP65Q6ZU64 1925 aaKnown RBP12.21□□□□□ -0.45
TRAV6-201ENST00000390428 RNF17Q9BXT8 1623 aaKnown RBP12.21□□□□□ -0.46
TRAV6-201ENST00000390428 MIA2Q96PC5 1412 aa12.2□□□□□ -0.46
TRAV6-201ENST00000390428 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
TRAV6-201ENST00000390428 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
TRAV6-201ENST00000390428 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
TRAV6-201ENST00000390428 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
TRAV6-201ENST00000390428 ZC3H13Q5T200 1668 aaKnown RBP12.19□□□□□ -0.46
TRAV6-201ENST00000390428 POTEB2H3BUK9 544 aa12.19□□□□□ -0.46
TRAV6-201ENST00000390428 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
TRAV6-201ENST00000390428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAV6-201ENST00000390428 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
TRAV6-201ENST00000390428 CPS1P31327 1500 aa12.18□□□□□ -0.46
TRAV6-201ENST00000390428 KANK4Q5T7N3 995 aaPredicted RBP12.18□□□□□ -0.46
TRAV6-201ENST00000390428 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
TRAV6-201ENST00000390428 DEPDC5O75140 1603 aa12.18□□□□□ -0.46
TRAV6-201ENST00000390428 ABCC3O15438 1527 aa12.17□□□□□ -0.46
TRAV6-201ENST00000390428 SHANK2Q9UPX8 1470 aa12.17□□□□□ -0.46
TRAV6-201ENST00000390428 SOCS7O14512 581 aa12.17□□□□□ -0.46
TRAV6-201ENST00000390428 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
TRAV6-201ENST00000390428 MYOM3Q5VTT5 1437 aa12.17□□□□□ -0.46
TRAV6-201ENST00000390428 CEP152O94986 1710 aa12.17□□□□□ -0.46
TRAV6-201ENST00000390428 MED14O60244 1454 aa12.16□□□□□ -0.46
TRAV6-201ENST00000390428 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
TRAV6-201ENST00000390428 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
TRAV6-201ENST00000390428 VWDEQ8N2E2 1590 aa12.15□□□□□ -0.46
TRAV6-201ENST00000390428 IQGAP1P46940 1657 aa12.15□□□□□ -0.46
TRAV6-201ENST00000390428 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
TRAV6-201ENST00000390428 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
TRAV6-201ENST00000390428 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
TRAV6-201ENST00000390428 TOM1O60784 492 aa12.13□□□□□ -0.47
TRAV6-201ENST00000390428 PSEN1P49768 467 aa12.13□□□□□ -0.47
TRAV6-201ENST00000390428 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
TRAV6-201ENST00000390428 STRCP1A6NGW2 1772 aa12.13□□□□□ -0.47
TRAV6-201ENST00000390428 UBR1Q8IWV7 1749 aa12.12□□□□□ -0.47
TRAV6-201ENST00000390428 IER5LQ5T953 404 aa12.12□□□□□ -0.47
TRAV6-201ENST00000390428 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
TRAV6-201ENST00000390428 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
TRAV6-201ENST00000390428 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
TRAV6-201ENST00000390428 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
TRAV6-201ENST00000390428 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
TRAV6-201ENST00000390428 ABCC5O15440 1437 aa12.1□□□□□ -0.47
TRAV6-201ENST00000390428 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
TRAV6-201ENST00000390428 HSPA1LP34931 641 aa12.09□□□□□ -0.47
TRAV6-201ENST00000390428 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
TRAV6-201ENST00000390428 ERBINQ96RT1 1412 aa12.09□□□□□ -0.47
TRAV6-201ENST00000390428 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
TRAV6-201ENST00000390428 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
TRAV6-201ENST00000390428 ARHGAP31Q2M1Z3 1444 aa12.08□□□□□ -0.48
TRAV6-201ENST00000390428 SYNMO15061 1565 aa12.07□□□□□ -0.48
TRAV6-201ENST00000390428 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
TRAV6-201ENST00000390428 LRRC7Q96NW7 1537 aa12.06□□□□□ -0.48
TRAV6-201ENST00000390428 DAPK1P53355 1430 aa12.06□□□□□ -0.48
TRAV6-201ENST00000390428 SEC24BO95487 1268 aa12.06□□□□□ -0.48
TRAV6-201ENST00000390428 SCAF11Q99590 1463 aaKnown RBP12.06□□□□□ -0.48
TRAV6-201ENST00000390428 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
TRAV6-201ENST00000390428 SLIT1O75093 1534 aa12.06□□□□□ -0.48
TRAV6-201ENST00000390428 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
TRAV6-201ENST00000390428 PIK3C2BO00750 1634 aa12.04□□□□□ -0.48
TRAV6-201ENST00000390428 FGD6Q6ZV73 1430 aa12.04□□□□□ -0.48
TRAV6-201ENST00000390428 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
TRAV6-201ENST00000390428 LTKP29376 864 aa12.04□□□□□ -0.48
TRAV6-201ENST00000390428 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
TRAV6-201ENST00000390428 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
TRAV6-201ENST00000390428 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms