RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 LRRC9Q6ZRR7 1453 aa11.14□□□□□ -0.63
TRBV28-201ENST00000390400 FECHP22830 423 aa11.14□□□□□ -0.63
TRBV28-201ENST00000390400 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRBV28-201ENST00000390400 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
TRBV28-201ENST00000390400 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
TRBV28-201ENST00000390400 ARXQ96QS3 562 aa11.12□□□□□ -0.63
TRBV28-201ENST00000390400 KIF14Q15058 1648 aa11.11□□□□□ -0.63
TRBV28-201ENST00000390400 HAX1O00165 279 aa11.11□□□□□ -0.63
TRBV28-201ENST00000390400 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
TRBV28-201ENST00000390400 FAM117AQ9C073 453 aa11.11□□□□□ -0.63
TRBV28-201ENST00000390400 COLQQ9Y215 455 aaPredicted RBP11.11□□□□□ -0.63
TRBV28-201ENST00000390400 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
TRBV28-201ENST00000390400 CENPBP07199 599 aaPredicted RBP11.1□□□□□ -0.63
TRBV28-201ENST00000390400 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
TRBV28-201ENST00000390400 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
TRBV28-201ENST00000390400 NUTM2FA1L443 756 aa11.09□□□□□ -0.63
TRBV28-201ENST00000390400 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
TRBV28-201ENST00000390400 PLEKHG3A1L390 1219 aa11.08□□□□□ -0.64
TRBV28-201ENST00000390400 POTEFA5A3E0 1075 aa11.08□□□□□ -0.64
TRBV28-201ENST00000390400 IER5LQ5T953 404 aa11.08□□□□□ -0.64
TRBV28-201ENST00000390400 DDX12PQ92771 950 aa11.08□□□□□ -0.64
TRBV28-201ENST00000390400 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
TRBV28-201ENST00000390400 ABCC10Q5T3U5 1492 aa11.07□□□□□ -0.64
TRBV28-201ENST00000390400 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
TRBV28-201ENST00000390400 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
TRBV28-201ENST00000390400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRBV28-201ENST00000390400 IRF6O14896 467 aa11.06□□□□□ -0.64
TRBV28-201ENST00000390400 GLI2P10070 1586 aa11.06□□□□□ -0.64
TRBV28-201ENST00000390400 TTC37Q6PGP7 1564 aa11.06□□□□□ -0.64
TRBV28-201ENST00000390400 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
TRBV28-201ENST00000390400 ABCA9Q8IUA7 1624 aa11.06□□□□□ -0.64
TRBV28-201ENST00000390400 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
TRBV28-201ENST00000390400 PTGER2P43116 358 aa11.05□□□□□ -0.64
TRBV28-201ENST00000390400 MAP2K5Q13163 448 aa11.05□□□□□ -0.64
TRBV28-201ENST00000390400 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
TRBV28-201ENST00000390400 FAM69CQ0P6D2 419 aa11.04□□□□□ -0.64
TRBV28-201ENST00000390400 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
TRBV28-201ENST00000390400 KIF13AQ9H1H9 1805 aa11.03□□□□□ -0.64
TRBV28-201ENST00000390400 GNPATO15228 680 aa11.03□□□□□ -0.64
TRBV28-201ENST00000390400 PLCG2P16885 1265 aa11.03□□□□□ -0.64
TRBV28-201ENST00000390400 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
TRBV28-201ENST00000390400 ITSN2Q9NZM3 1697 aa11.03□□□□□ -0.64
TRBV28-201ENST00000390400 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
TRBV28-201ENST00000390400 CDC42BPAQ5VT25 1732 aa11.02□□□□□ -0.65
TRBV28-201ENST00000390400 MAP3K4Q9Y6R4 1608 aa11.02□□□□□ -0.65
TRBV28-201ENST00000390400 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
TRBV28-201ENST00000390400 CD109Q6YHK3 1445 aa11.01□□□□□ -0.65
TRBV28-201ENST00000390400 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
TRBV28-201ENST00000390400 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
TRBV28-201ENST00000390400 ARAP3Q8WWN8 1544 aa11□□□□□ -0.65
TRBV28-201ENST00000390400 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
TRBV28-201ENST00000390400 EVI5O60447 810 aa11□□□□□ -0.65
TRBV28-201ENST00000390400 AMHR2Q16671 573 aa11□□□□□ -0.65
TRBV28-201ENST00000390400 PLCH2O75038 1416 aa11□□□□□ -0.65
TRBV28-201ENST00000390400 TSPOAP1O95153 1857 aa11□□□□□ -0.65
TRBV28-201ENST00000390400 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
TRBV28-201ENST00000390400 CDC42BPBQ9Y5S2 1711 aa10.99□□□□□ -0.65
TRBV28-201ENST00000390400 GABBR2O75899 941 aa10.99□□□□□ -0.65
TRBV28-201ENST00000390400 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
TRBV28-201ENST00000390400 CFDP1Q9UEE9 299 aaPredicted RBP10.99□□□□□ -0.65
TRBV28-201ENST00000390400 CLCN6P51797 869 aa10.98□□□□□ -0.65
TRBV28-201ENST00000390400 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
TRBV28-201ENST00000390400 FGD6Q6ZV73 1430 aa10.98□□□□□ -0.65
TRBV28-201ENST00000390400 MIA2Q96PC5 1412 aa10.98□□□□□ -0.65
TRBV28-201ENST00000390400 G3V3G9 751 aa10.97□□□□□ -0.65
TRBV28-201ENST00000390400 FCHSD2O94868 740 aa10.97□□□□□ -0.65
TRBV28-201ENST00000390400 PTGDRQ13258 359 aa10.97□□□□□ -0.65
TRBV28-201ENST00000390400 HIC1Q14526 733 aa10.97□□□□□ -0.65
TRBV28-201ENST00000390400 CDHR5Q9HBB8 845 aa10.97□□□□□ -0.65
TRBV28-201ENST00000390400 CFAP74Q9C0B2 1584 aa10.97□□□□□ -0.65
TRBV28-201ENST00000390400 FANCAO15360 1455 aa10.96□□□□□ -0.65
TRBV28-201ENST00000390400 TEX14Q8IWB6 1497 aa10.96□□□□□ -0.65
TRBV28-201ENST00000390400 EFCAB2Q5VUJ9 269 aa10.96□□□□□ -0.65
TRBV28-201ENST00000390400 NPDC1Q9NQX5 325 aaPredicted RBP10.96□□□□□ -0.65
TRBV28-201ENST00000390400 PPRC1Q5VV67 1664 aaKnown RBP10.95□□□□□ -0.66
TRBV28-201ENST00000390400 PTPN23Q9H3S7 1636 aa10.95□□□□□ -0.66
TRBV28-201ENST00000390400 HOMEZQ8IX15 550 aa10.95□□□□□ -0.66
TRBV28-201ENST00000390400 ZNF777Q9ULD5 760 aaPredicted RBP10.95□□□□□ -0.66
TRBV28-201ENST00000390400 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
TRBV28-201ENST00000390400 NEO1Q92859 1461 aa10.94□□□□□ -0.66
TRBV28-201ENST00000390400 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
TRBV28-201ENST00000390400 PTCD2Q8WV60 388 aaKnown RBP10.94□□□□□ -0.66
TRBV28-201ENST00000390400 ZMYND15Q9H091 742 aa10.94□□□□□ -0.66
TRBV28-201ENST00000390400 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
TRBV28-201ENST00000390400 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
TRBV28-201ENST00000390400 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
TRBV28-201ENST00000390400 MS4A1P11836 297 aa10.93□□□□□ -0.66
TRBV28-201ENST00000390400 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
TRBV28-201ENST00000390400 AKNAQ7Z591 1439 aa10.92□□□□□ -0.66
TRBV28-201ENST00000390400 ZNF644Q9H582 1327 aaPredicted RBP10.92□□□□□ -0.66
TRBV28-201ENST00000390400 FAM50AQ14320 339 aaKnown RBP10.92□□□□□ -0.66
TRBV28-201ENST00000390400 ABCC1P33527 1531 aa10.92□□□□□ -0.66
TRBV28-201ENST00000390400 ADGRL1O94910 1474 aa10.92□□□□□ -0.66
TRBV28-201ENST00000390400 SYCP2Q9BX26 1530 aa10.91□□□□□ -0.66
TRBV28-201ENST00000390400 TBC1D12O60347 775 aa10.91□□□□□ -0.66
TRBV28-201ENST00000390400 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
TRBV28-201ENST00000390400 KIAA1107Q9UPP5 1409 aa10.91□□□□□ -0.66
TRBV28-201ENST00000390400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRBV28-201ENST00000390400 SEC24BO95487 1268 aa10.9□□□□□ -0.66
TRBV28-201ENST00000390400 PHOX2BQ99453 314 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms