RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 PLB1Q6P1J6 1458 aa18.3■□□□□ 0.52
PSME4-201ENST00000389993 RBM33Q96EV2 1170 aaKnown RBP18.3■□□□□ 0.52
PSME4-201ENST00000389993 MCCP23508 829 aa18.3■□□□□ 0.52
PSME4-201ENST00000389993 MTHFSP49914 203 aa18.3■□□□□ 0.52
PSME4-201ENST00000389993 ZBED9Q6R2W3 1325 aa18.29■□□□□ 0.52
PSME4-201ENST00000389993 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
PSME4-201ENST00000389993 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.51
PSME4-201ENST00000389993 GOLGA6L4A6NEF3 574 aa18.27■□□□□ 0.51
PSME4-201ENST00000389993 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.51
PSME4-201ENST00000389993 SLC26A8Q96RN1 970 aa18.27■□□□□ 0.51
PSME4-201ENST00000389993 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
PSME4-201ENST00000389993 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
PSME4-201ENST00000389993 E9PSI1 815 aa18.25■□□□□ 0.51
PSME4-201ENST00000389993 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
PSME4-201ENST00000389993 DAPK1P53355 1430 aa18.25■□□□□ 0.51
PSME4-201ENST00000389993 AIMP1Q12904 312 aaKnown RBP18.25■□□□□ 0.51
PSME4-201ENST00000389993 TEFQ10587 303 aa18.24■□□□□ 0.51
PSME4-201ENST00000389993 HSP90B1P14625 803 aaKnown RBP18.24■□□□□ 0.51
PSME4-201ENST00000389993 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
PSME4-201ENST00000389993 PDE3BQ13370 1112 aa18.23■□□□□ 0.51
PSME4-201ENST00000389993 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
PSME4-201ENST00000389993 CDK11BP21127 795 aaKnown RBP18.23■□□□□ 0.51
PSME4-201ENST00000389993 ZKSCAN2Q63HK3 967 aa18.23■□□□□ 0.51
PSME4-201ENST00000389993 ESCO1Q5FWF5 840 aa18.23■□□□□ 0.51
PSME4-201ENST00000389993 PDE4AP27815 886 aa18.22■□□□□ 0.51
PSME4-201ENST00000389993 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
PSME4-201ENST00000389993 GNL2Q13823 731 aaKnown RBP18.22■□□□□ 0.51
PSME4-201ENST00000389993 EPRSP07814 1512 aaKnown RBP18.22■□□□□ 0.51
PSME4-201ENST00000389993 NLRP6P59044 892 aa18.22■□□□□ 0.51
PSME4-201ENST00000389993 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
PSME4-201ENST00000389993 MSH5O43196 834 aa18.21■□□□□ 0.51
PSME4-201ENST00000389993 CABP1Q9NZU7 370 aa18.2■□□□□ 0.5
PSME4-201ENST00000389993 GTF2E1P29083 439 aaPredicted RBP18.2■□□□□ 0.5
PSME4-201ENST00000389993 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
PSME4-201ENST00000389993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.2■□□□□ 0.5
PSME4-201ENST00000389993 C11orf95C9JLR9 678 aaPredicted RBP18.2■□□□□ 0.5
PSME4-201ENST00000389993 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
PSME4-201ENST00000389993 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
PSME4-201ENST00000389993 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
PSME4-201ENST00000389993 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
PSME4-201ENST00000389993 ARID3AQ99856 593 aa18.19■□□□□ 0.5
PSME4-201ENST00000389993 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
PSME4-201ENST00000389993 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
PSME4-201ENST00000389993 TSPYL4Q9UJ04 414 aa18.19■□□□□ 0.5
PSME4-201ENST00000389993 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
PSME4-201ENST00000389993 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
PSME4-201ENST00000389993 ABTB2Q8N961 1025 aa18.19■□□□□ 0.5
PSME4-201ENST00000389993 FKBP5Q13451 457 aaPredicted RBP18.18■□□□□ 0.5
PSME4-201ENST00000389993 RRS1Q15050 365 aaKnown RBP18.18■□□□□ 0.5
PSME4-201ENST00000389993 FRAT2O75474 233 aaPredicted RBP18.17■□□□□ 0.5
PSME4-201ENST00000389993 NLRP2Q9NX02 1062 aa18.17■□□□□ 0.5
PSME4-201ENST00000389993 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
PSME4-201ENST00000389993 HMMRO75330 724 aa18.17■□□□□ 0.5
PSME4-201ENST00000389993 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
PSME4-201ENST00000389993 AKNAQ7Z591 1439 aa18.16■□□□□ 0.5
PSME4-201ENST00000389993 DRC7Q8IY82 874 aa18.16■□□□□ 0.5
PSME4-201ENST00000389993 LNPKQ9C0E8 428 aa18.16■□□□□ 0.5
PSME4-201ENST00000389993 BCAR3O75815 825 aa18.16■□□□□ 0.5
PSME4-201ENST00000389993 ERICH6BQ5W0A0 696 aa18.16■□□□□ 0.5
PSME4-201ENST00000389993 FAM177BA6PVY3 158 aa18.15■□□□□ 0.5
PSME4-201ENST00000389993 WAPLQ7Z5K2 1190 aa18.15■□□□□ 0.5
PSME4-201ENST00000389993 TCP11L2Q8N4U5 519 aa18.15■□□□□ 0.5
PSME4-201ENST00000389993 CLSTN1O94985 981 aa18.15■□□□□ 0.5
PSME4-201ENST00000389993 ATF3P18847 181 aa18.15■□□□□ 0.5
PSME4-201ENST00000389993 TTC5Q8N0Z6 440 aa18.15■□□□□ 0.5
PSME4-201ENST00000389993 C9orf78Q9NZ63 289 aaPredicted RBP18.15■□□□□ 0.5
PSME4-201ENST00000389993 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
PSME4-201ENST00000389993 DZIP1LQ8IYY4 767 aaKnown RBP18.14■□□□□ 0.49
PSME4-201ENST00000389993 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
PSME4-201ENST00000389993 CENPQQ7L2Z9 268 aaPredicted RBP18.14■□□□□ 0.49
PSME4-201ENST00000389993 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
PSME4-201ENST00000389993 STRN4Q9NRL3 753 aa18.13■□□□□ 0.49
PSME4-201ENST00000389993 CEBPAP49715 358 aaPredicted RBP18.12■□□□□ 0.49
PSME4-201ENST00000389993 SKAP1Q86WV1 359 aa18.12■□□□□ 0.49
PSME4-201ENST00000389993 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
PSME4-201ENST00000389993 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
PSME4-201ENST00000389993 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
PSME4-201ENST00000389993 HFM1A2PYH4 1435 aa18.11■□□□□ 0.49
PSME4-201ENST00000389993 NAIPQ13075 1403 aa18.11■□□□□ 0.49
PSME4-201ENST00000389993 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
PSME4-201ENST00000389993 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
PSME4-201ENST00000389993 FOSBP53539 338 aa18.1■□□□□ 0.49
PSME4-201ENST00000389993 CAMSAP2Q08AD1 1489 aa18.1■□□□□ 0.49
PSME4-201ENST00000389993 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
PSME4-201ENST00000389993 G3V3G9 751 aa18.09■□□□□ 0.49
PSME4-201ENST00000389993 KDM4AO75164 1064 aa18.09■□□□□ 0.49
PSME4-201ENST00000389993 DCAF8Q5TAQ9 597 aa18.09■□□□□ 0.49
PSME4-201ENST00000389993 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
PSME4-201ENST00000389993 FAM161AQ3B820 660 aa18.08■□□□□ 0.49
PSME4-201ENST00000389993 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.48
PSME4-201ENST00000389993 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
PSME4-201ENST00000389993 ANO8Q9HCE9 1232 aaPredicted RBP18.07■□□□□ 0.48
PSME4-201ENST00000389993 CREBRFQ8IUR6 639 aa18.07■□□□□ 0.48
PSME4-201ENST00000389993 KIAA0586Q9BVV6 1533 aa18.07■□□□□ 0.48
PSME4-201ENST00000389993 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
PSME4-201ENST00000389993 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
PSME4-201ENST00000389993 NUTM2BA6NNL0 878 aaPredicted RBP18.06■□□□□ 0.48
PSME4-201ENST00000389993 NUTM2EB1AL46 878 aaPredicted RBP18.06■□□□□ 0.48
PSME4-201ENST00000389993 NUTM2AQ8IVF1 878 aaPredicted RBP18.06■□□□□ 0.48
PSME4-201ENST00000389993 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms